- Transcript 'KH2012:KH.C3.195.v1....'
Transcript Model
Transcript Id
KH2012:KH.C3.195.v1.A.SL1-1
Possible name(s)
SOCS6; SOCS7
Gene model
Location
KhC3 [4,386,098 / 4,389,562]
Amino acid sequence
Length: 516
>KH.C3.195.v1.A.SL1-1
VRFNVVKMNQFATSAGPGARRKEFQHTRRYGKASEEKKNSEHESELRVPRMNVRRANERN
YNGVSCNSDENVYGEIDVNPIVSVSFPTKSVVQAAKENDALLNFNLKISTNDIKNHTESA
IDHSGFHPCTTSRLESDPEIGSNFFCHDSIPAQNNNFNDMLLLEQPKFKVRPRRHVYHTI
ELPDRNDISDGTPSNNHKVKIISSPPIPPKPHYLRSGFNSKLPPKLPPKVVNANAAMKRK
QLNEEYFENIRKSMDFNLSESDEAGLQEEAISITIPGTETHPYWTISDTTTNTTQNLTTE
TSSTQLETPLIKNTPLTLDVHKQRRQEFVDSLKALKQCGWYWGNMSWEDAESMLAQRPGE
EGVFLVRDSQDPLHILTLTIRSVELSIHHVRVEHTEGKFQLYDPDRGVSRGAANCVRHPN
IVTFIKLAMKHSRSGTFIYFIKTRNMGVPPVQIRLLTPISRFTCVKSLKYYVRFTIRDSV
PYDSITNLPIPHDLKEYLLNSPYFDATEDLQCALLS
Nucleotide sequence
Length: 2,041
>KH2012:KH.C3.195.v1.A.SL1-1
GTTAATGCAACAAATGGTATTAGATTACAATTAAGTTCGGTTCAATGTAGTTAAAATGAA
CCAGTTTGCCACCTCTGCTGGTCCAGGGGCACGAAGAAAAGAATTTCAACACACAAGAAG
ATATGGAAAAGCTTCAGAGGAAAAAAAGAACAGCGAACATGAATCTGAACTTCGTGTTCC
AAGAATGAATGTGCGTAGAGCAAATGAAAGAAATTACAATGGTGTTTCTTGTAACAGTGA
TGAAAATGTATATGGAGAAATAGATGTAAATCCTATCGTCTCTGTTTCATTTCCTACGAA
AAGTGTTGTTCAAGCGGCTAAAGAAAACGATGCTCTACTAAACTTTAATTTGAAAATCAG
CACAAACGATATTAAGAATCATACAGAATCTGCAATTGATCATTCTGGTTTTCACCCTTG
CACTACAAGTCGATTGGAATCTGACCCAGAAATAGGCAGTAACTTTTTTTGTCATGATTC
AATACCAGCACAAAATAATAATTTTAATGACATGCTTTTACTGGAACAACCGAAATTTAA
AGTGCGCCCGAGACGCCATGTTTATCATACAATTGAGTTACCGGATCGAAATGACATATC
TGATGGTACCCCATCAAACAATCACAAAGTTAAAATAATCTCTTCACCTCCTATTCCACC
AAAACCACATTATCTTCGCTCTGGTTTTAACAGCAAGCTTCCCCCAAAACTTCCTCCTAA
AGTTGTTAATGCAAATGCTGCAATGAAGAGGAAACAACTTAATGAGGAATACTTTGAAAA
CATTAGAAAAAGTATGGACTTTAATTTGAGTGAAAGTGATGAAGCAGGTTTGCAAGAAGA
AGCTATTAGTATTACAATTCCAGGAACAGAAACTCATCCATACTGGACAATATCTGATAC
AACAACCAACACAACTCAGAATTTGACTACAGAAACTTCTTCCACCCAGTTAGAAACCCC
ATTGATCAAGAACACACCTTTAACATTGGATGTGCATAAACAAAGAAGGCAGGAGTTTGT
GGACAGTTTAAAAGCTTTGAAACAGTGTGGATGGTATTGGGGAAACATGTCATGGGAGGA
TGCTGAATCAATGTTAGCACAAAGACCTGGTGAAGAAGGTGTGTTCTTGGTTCGTGACAG
CCAAGATCCTTTGCACATATTAACTTTAACAATACGTTCAGTGGAACTATCAATACACCA
TGTCAGGGTTGAACACACTGAAGGTAAGTTCCAGCTGTACGACCCCGATAGAGGTGTAAG
CAGAGGTGCAGCTAACTGTGTGAGACATCCAAATATTGTAACTTTTATAAAGCTTGCCAT
GAAGCATTCTCGGTCGGGTACTTTTATTTATTTCATTAAGACACGAAACATGGGCGTACC
ACCAGTGCAGATCAGACTTCTCACCCCAATTTCTCGTTTCACTTGTGTCAAGTCATTGAA
ATACTATGTCCGATTCACCATCAGAGACTCTGTTCCTTATGATTCAATCACAAACTTACC
TATACCACACGATCTGAAGGAATATCTTCTCAATTCACCATATTTCGATGCAACAGAAGA
TTTACAATGTGCATTGCTATCATGAAACATAAATAACCACAGTAGTTAACTAACTTTGTA
ACTTATGTGCATTCTTATAAAAGTATAGTCCAACTGTTTTACATTTTAATCTCGTATTTC
GTGTTTCTGCTCTGCATAGTTGCAAAGCTACTTTTGTTTTCTTTTATAGACTATAGATAT
GCAGCATGTTGTATGCTGTGAATGGTAAAAGTTTGTGTTTCTCTATTTCACTGAAAGAAG
TGTTATATGGTGTCAAATTCAACCCGAGACATTATTGAATTCACAACATATCCAACATAA
TATTGCTATGAGCATATGAGGTGCTTGGGGTTGCACATTTTTATTCCACTGTTCTGCCTG
GCAATTTATTATGCCTAAATTGGGAAACGTTTTAATATTTTTATTAATTTCTTTTGTATT
TAGCTGTGTTGTGTGCAATATTTATATTCCTAATCTGGAAGTTTTAAAATGAACCAGGAA
T
| SUPERFAMILY |
SH2_dom_sf (IPR036860) - T[315-428] 1.06E-17 |
| PANTHER |
SOCS7 (IPR028423) - T[319-514] 1.7E-49 |
| Gene3D |
SH2_dom_sf (IPR036860) - T[321-510] 1.9E-37 |
| CDD |
SOCS7_SH2 (IPR035866) - T[329-439] 1.62106E-47 |
| SMART |
SH2 (IPR000980) - T[338-434] 1.6E-14 |
| Pfam |
SH2 (IPR000980) - T[340-400] 5.7E-8 |
| ProSiteProfiles |
SH2 (IPR000980) - T[340-459] 13.771 |
| ProSiteProfiles |
SOCS_box (IPR001496) - T[454-504] 12.011 |
| SMART |
SOCS_box (IPR001496) - T[459-502] 8.6E-6 - T[465-501] 8.9E-6 |
| Pfam |
SOCS_box (IPR001496) - T[465-499] 5.9E-6 |
| SUPERFAMILY |
SOCS_box-like_dom_sf (IPR036036) - T[465-504] 5.49E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SOCS6_HUMAN | 37.853 % | 116 | 9.38E-28 |
| SOCS7_HUMAN | 42.211 % | 162 | 1.28E-43 |
