- Transcript 'KH2012:KH.C3.170.v1....'
Transcript Model
Transcript Id
KH2012:KH.C3.170.v1.A.SL1-1
Possible name(s)
FOXF1; FOXF2; FOXL1
Gene model
Location
KhC3 [3,589,768 / 3,597,469]
Amino acid sequence
Length: 576
>KH.C3.170.v1.A.SL1-1
SMEVTGHHPGRVLSPVDVYQGRLNHTPQRVGHPQLSQQRSLPVLPHQYSLGNHHQPQLQH
SHSIEQPPHHHQMPHPQPFQIQPNSHVLQCLQQVNKGEMPARPNSSEPALNAPLQPLHHS
HIQRSPNGEAVPAMEELRNENANNNNSAEGVMDGNTSAMSDGSNADLAVEHNLSIGAVSG
APETPPSTEEEGSDSTNGSGGKKQDNGGALGHRRPEKPPYSYIALIVMAIQSSPAKKLTL
SEIYNFLQTRFEFFRGAYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPASEFM
FEEGSFRRRPRGFRRKCQALKPYGIFGGGPGLIGHQGYGPPHEMFGAGGMPHGAMPPPSH
HRPNLMGFDTAGMNAAAAASAHFFNGAAAAAVAANGITSPQTTSPTLPIPPKEPGTPHSP
HNHSNPYSSNCAEVSTGTNTSVQVSPSMSAVANHPHYSPGAMFSWPGATSQSHGTYMRPN
PPTPNGIPDPHTHAMMNGNVNGSVGQRMEYHHPFYATPRDSHLAYEAPTMKFKTECAMDP
YSTNGMDRKPYPAMPTPIPVASGYSNGYYDTKSCAM
Nucleotide sequence
Length: 2,074
>KH2012:KH.C3.170.v1.A.SL1-1
ATTTCTTTTAAGCGCTTTTAAATTATTACAAGACCAGTTTTACAACATCAGTTATTGAAG
TATGGAAGTGACAGGACACCACCCTGGTCGTGTCTTGAGTCCTGTTGATGTCTATCAAGG
TCGTTTGAACCACACGCCACAACGGGTCGGTCACCCACAACTTAGCCAGCAAAGGTCTCT
ACCAGTTCTGCCGCACCAGTACAGTCTCGGCAACCACCATCAACCACAGCTACAGCATTC
CCACAGCATTGAGCAACCGCCGCACCATCACCAGATGCCGCATCCTCAACCGTTTCAGAT
ACAACCAAACTCCCACGTTCTTCAATGCCTCCAACAAGTCAACAAAGGTGAGATGCCGGC
CAGGCCAAACAGCAGTGAGCCAGCGCTGAACGCGCCTCTTCAGCCACTCCACCATTCGCA
TATACAAAGATCGCCAAACGGGGAAGCGGTTCCAGCAATGGAAGAGTTAAGGAACGAGAA
CGCAAACAACAACAACAGCGCAGAGGGAGTAATGGATGGCAACACATCAGCAATGTCGGA
TGGGAGCAACGCTGACTTAGCTGTAGAGCACAACTTGAGCATCGGAGCAGTGTCCGGAGC
ACCCGAGACTCCTCCGAGCACAGAAGAGGAAGGAAGTGACAGCACGAATGGATCAGGTGG
GAAGAAGCAAGATAACGGAGGAGCACTTGGACACAGGCGACCAGAGAAACCACCGTACTC
TTACATTGCTCTCATAGTTATGGCGATACAGAGTTCCCCAGCGAAGAAGTTGACGCTGAG
CGAAATTTACAACTTTCTCCAAACTCGTTTCGAATTTTTCCGCGGTGCATACCAGGGTTG
GAAGAATTCCGTCCGCCACAATCTCTCGCTTAACGAGTGTTTTATTAAATTACCGAAAGG
TCTCGGCAGGCCTGGTAAAGGTCACTACTGGACGATCGATCCTGCCAGCGAATTCATGTT
CGAGGAAGGCTCGTTTCGCAGAAGACCTCGCGGGTTCAGAAGAAAGTGTCAAGCTTTAAA
ACCATATGGCATTTTCGGTGGCGGGCCCGGTTTAATCGGACATCAAGGTTACGGCCCCCC
GCACGAGATGTTTGGGGCAGGAGGCATGCCCCACGGGGCCATGCCCCCGCCTTCACACCA
CCGACCCAACTTAATGGGGTTTGATACTGCAGGCATGAACGCTGCTGCTGCCGCTTCTGC
ACATTTCTTTAACGGTGCGGCGGCCGCAGCGGTCGCAGCGAATGGCATTACAAGCCCACA
AACAACGTCTCCAACTCTGCCCATCCCGCCAAAGGAACCAGGTACCCCACATTCCCCCCA
CAACCACTCTAACCCCTACTCCTCAAACTGTGCTGAGGTTTCCACTGGAACAAACACTTC
TGTCCAGGTCTCTCCATCCATGTCCGCTGTCGCCAACCACCCGCACTACTCGCCGGGAGC
CATGTTCAGCTGGCCGGGCGCAACGTCCCAGTCCCACGGGACTTACATGCGTCCAAATCC
GCCAACGCCCAACGGAATCCCCGATCCCCATACCCATGCGATGATGAACGGTAACGTAAA
CGGCTCAGTGGGTCAGCGCATGGAATACCACCATCCTTTCTACGCGACTCCAAGAGACAG
CCACCTCGCTTATGAAGCGCCCACCATGAAATTCAAGACCGAATGTGCAATGGATCCTTA
CTCCACTAACGGGATGGATAGAAAGCCTTACCCGGCGATGCCAACGCCTATTCCTGTAGC
ATCGGGATACTCGAACGGCTACTATGACACCAAGTCATGCGCGATGTGATCTGGAAGCAC
CCGGTAGTGGGGGCTATCTCCTAACTTCCCAGGCAAAGACTGTCCGGTGGCGCAAAGCTA
CATCACCATCTGGGTAATGAAGAATGATCTGAATATTGAATCGGGCTCGCAAAGCTGAAC
AGAGTGATACGGGACGGCCGCGTAAAGAAATAAAAGACCAAGAACGATCCCAGCGAGTGG
CACATTGTATTGCACGAATGTTGGGTAATTGTTATATGATCCAATCGTTTATTTTATTTG
AAAAATTGTACAATTAAACAAAAACTAGCTACAA
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[204-311] 2.8E-42 |
| SMART |
Fork_head_dom (IPR001766) - T[215-305] 3.3E-57 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[216-310] 3.9E-37 |
| CDD |
Fork_head_dom (IPR001766) - T[217-294] 1.40471E-48 |
| ProSitePatterns |
TF_fork_head_CS_1 (IPR018122) - T[217-230] . |
| Pfam |
Fork_head_dom (IPR001766) - T[217-301] 3.4E-36 |
| ProSiteProfiles |
Fork_head_dom (IPR001766) - T[217-311] 37.452 |
| PRINTS |
Fork_head_dom (IPR001766) - T[217-230] 4.7E-20 - T[238-255] 4.7E-20 - T[261-278] 4.7E-20 |
| ProSitePatterns |
TF_fork_head_CS_2 (IPR030456) - T[261-267] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FOXL1_HUMAN | 60.825 % | 139 | 1.72E-36 |
| FOXF1_HUMAN | 54.274 % | 194 | 1.13E-56 |
| FOXF2_HUMAN | 95.455 % | 204 | 1.53E-59 |