- Transcript 'KH2012:KH.C2.973.v2....'
Transcript Model
Transcript Id
KH2012:KH.C2.973.v2.A.SL3-2
Possible name(s)
ZNF420; ZNF616; ZNF726
Gene model
Location
KhC2 [6,341,525 / 6,342,663]
Amino acid sequence
Length: 276
>KH.C2.973.v2.A.SL3-2
NLLGRQNMNKENIKGKICSLCQQKFKGRSMIKRYKVHDGDETFQCRKCDECYSICRLCKR
QYEYGTKKEHYKIHFGDKPLQCRKCGICFSRLDSLMRHIRREIKGKQFKCSTCDLMFSTE
VQRDTHQNKHLGYVDKTYSCEHCPRTFTQSNLFKMHMNNAHNDKPKEHVCKVCNKVFANS
FSLKSHKTVHTGEKPHKCETCGANFTQSHSLRRHQLIHSGEKPFKCSVCNKSFNQLDTLK
RHEEIHTGENSYKCSQCKIVFSQKAALKLHQRKEHK
Nucleotide sequence
Length: 1,138
>KH2012:KH.C2.973.v2.A.SL3-2
GTTAAATGTGTTTGGTATATAGATGGTGGAATTCAAACTTTAGATATTTGTGAAATTTGC
TGGGAAGACAAAACATGAATAAAGAAAACATTAAGGGTAAGATATGCAGCTTGTGCCAGC
AAAAGTTCAAAGGACGTTCCATGATAAAACGCTACAAAGTGCATGATGGAGATGAAACCT
TTCAGTGCCGCAAATGTGATGAGTGTTATTCAATATGCAGGCTATGTAAGCGGCAGTACG
AGTATGGTACTAAGAAAGAACATTACAAGATTCATTTTGGAGACAAACCGTTACAGTGCC
GTAAATGCGGTATCTGTTTCTCGCGCTTGGACAGTTTGATGCGGCATATCAGGAGAGAAA
TAAAAGGAAAACAATTCAAATGTTCAACATGTGACCTAATGTTTTCCACGGAGGTCCAGC
GCGACACACACCAGAATAAGCATTTAGGGTACGTGGACAAAACCTATTCATGCGAGCACT
GCCCAAGGACCTTTACACAGAGCAACCTGTTCAAGATGCATATGAACAATGCACATAACG
ACAAGCCAAAGGAACACGTTTGTAAAGTTTGTAACAAAGTGTTTGCTAACAGCTTTAGCC
TGAAGAGTCACAAGACAGTTCACACCGGAGAAAAACCCCACAAGTGTGAAACCTGTGGCG
CCAATTTTACCCAATCACATTCTTTACGTCGTCACCAGCTTATACATAGTGGAGAGAAGC
CGTTTAAATGCTCCGTGTGCAACAAGTCCTTTAACCAATTAGACACATTGAAAAGGCACG
AAGAGATACACACTGGCGAGAATTCTTACAAGTGTTCCCAGTGCAAGATCGTTTTCAGTC
AAAAAGCTGCTTTGAAACTTCACCAAAGAAAGGAGCACAAGTGAATAAACTAAAACGTTT
AAAAAAGTAAAACATTTTGGTTTTATTTTGATGACTTTTGCGCCCTGTATATAGACAACG
GTTACGGACCCATCTTATTATAACTATATTCCTATAATTTCAACTAAGTTAGACTTCTGC
CAAATACTTGTTATTGTCTGTAGTACTTCAATCTGGTACATTCTAAACCACAGAGCATTG
TTTGTGATTTGAATTAAGTTGTTTGTCGTTTTCAGAAATAAAACAAACTTACAATTGA
| SMART |
Znf_C2H2_type (IPR013087) - T[53-74] 140.0 - T[80-100] 16.0 - T[108-130] 0.3 - T[138-161] 0.012 - T[168-190] 0.0035 - T[196-218] 0.043 - T[224-246] 5.2E-4 - T[252-275] 6.5E-4 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[68-117] 3.28E-11 - T[106-157] 8.32E-9 - T[176-233] 4.71E-21 - T[218-270] 6.37E-18 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[80-107] 8.995 - T[108-135] 8.6 - T[138-166] 10.824 - T[168-195] 14.69 - T[196-223] 15.667 - T[224-251] 14.607 - T[252-276] 11.552 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[110-130] . - T[140-161] . - T[170-190] . - T[198-218] . - T[226-246] . - T[254-275] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN568_HUMAN | 38.846 % | 182 | 2.69E-53 |
| ZN135_HUMAN | 36.328 % | 174 | 2.59E-50 |
| ZN879_HUMAN | 34.448 % | 173 | 3.65E-50 |
