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- Transcript 'KH2012:KH.C2.957.v1....'
Transcript Model
Transcript Id
KH2012:KH.C2.957.v1.A.nonSL1-1
Possible name(s)
DLX1; MSX1; MSX2
Gene model
Location
KhC2 [5,773,511 / 5,775,832]
Amino acid sequence
Length: 333
>KH.C2.957.v1.A.nonSL1-1
KEFKLKMTVNESDRIQSSVLSECVSEPEVTSSTVTSPKPKEESINHDKDSSFNNSETQEN
PPKKIKKEKLNFSIEFLLSKPERKTRTPPIQSTDASLQHKPYFSGYFTSYNPTFDPFSMW
GKSHSPPKPQLDYPAITSKESSPTRSDVTETDDCSYESTSPKSNDVIPTSPNAFRISKCS
LRKHKPNRKPRTPFSTEQLLSLERRFQDKQYLSIAERAEFSASLALSETQVKIWFQNRRA
KAKRLHEAEFEKVKLAAAAAAYTDLLQPPTKPHALYPGYGVRGIPTDPAMRLGHTGPLAR
GVTASPSLNAFSNFAQSRCHRPATISYYPTESR
Nucleotide sequence
Length: 1,306
>KH2012:KH.C2.957.v1.A.nonSL1-1
AGTTGAAGCAGTTCATATTGAGAGAAGCATCCCTCAGACGAGTAGTTCGTAAATTTTAGA
ATATTGAAGAATAAATAAAATATTCAAGAAATTTTTAAGAAAATTGAAAAGAGTTTAAAT
TAAAAATGACAGTAAACGAATCCGATCGCATTCAATCCTCTGTATTGTCGGAATGTGTAT
CCGAACCTGAAGTGACGTCATCGACAGTGACGTCACCAAAACCTAAGGAAGAGTCAATTA
ACCACGACAAAGATTCGAGTTTTAATAATTCAGAAACACAAGAAAATCCACCGAAAAAAA
TTAAAAAGGAAAAACTTAATTTTAGCATTGAATTCCTACTTTCCAAACCTGAAAGAAAAA
CCCGGACACCTCCAATCCAATCCACAGATGCTTCCCTTCAACACAAACCTTATTTTTCCG
GATATTTCACAAGTTACAACCCAACTTTTGACCCTTTTTCTATGTGGGGTAAATCCCATT
CACCCCCCAAGCCCCAACTCGATTACCCAGCTATAACGTCAAAGGAATCGTCACCCACCA
GGTCTGACGTCACAGAAACTGATGATTGTAGTTACGAGTCGACGTCGCCGAAGTCTAATG
ACGTCATTCCGACGTCACCGAATGCTTTCCGTATATCTAAATGTTCACTTCGTAAACACA
AACCAAACCGAAAACCCCGCACACCGTTCAGCACCGAGCAACTACTTTCATTGGAACGAA
GATTTCAGGACAAACAATATCTTTCTATAGCAGAACGTGCAGAATTCTCTGCCTCTCTTG
CATTATCTGAAACTCAGGTGAAAATTTGGTTTCAAAACCGTCGCGCTAAAGCAAAACGTC
TTCACGAAGCTGAGTTTGAAAAAGTGAAGCTGGCTGCTGCAGCAGCAGCATATACTGACT
TATTACAACCGCCCACAAAACCTCACGCCTTATACCCCGGTTACGGTGTAAGAGGAATAC
CCACAGACCCAGCAATGCGATTGGGGCATACTGGGCCACTAGCCCGAGGTGTAACAGCAT
CGCCGAGCCTAAACGCATTTTCAAACTTTGCCCAGAGTCGTTGTCATCGACCAGCGACTA
TCTCCTACTACCCAACTGAGAGTCGATAGTTCCTCATTTCAGTATTTTCTTTTGTCGCGA
ATATTTAAGCTGCTGTCTTCACTTTTTTAGATGTCGTTTTCGGCAAACAGTTATTACTGC
CGAAAGAAACGTTTTTGCGATTTTGAATATGTTGTAAATCTGCTGATGTTATATTCTCAA
GAGCTTTATTTTGCACGAATAATAAACTATCGTACTGTAAAAACAG
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[171-245] 2.78E-22 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[185-245] 20.228 |
| SMART |
Homeobox_dom (IPR001356) - T[187-249] 2.1E-24 |
| CDD |
Homeobox_dom (IPR001356) - T[188-246] 1.96892E-20 |
| Pfam |
Homeobox_dom (IPR001356) - T[188-244] 9.0E-21 |
| PRINTS |
Homeobox_metazoa (IPR020479) - T[209-220] 6.1E-6 - T[224-234] 6.1E-6 - T[234-243] 6.1E-6 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[220-243] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DLX1_HUMAN | 54.321 % | 85.1 | 4.05E-19 |
| MSX1_HUMAN | 76.404 % | 139 | 6.74E-39 |
| MSX2_HUMAN | 45.05 % | 141 | 3.39E-40 |