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- Transcript 'KH2012:KH.C2.821.v1....'
Transcript Model
Transcript Id
KH2012:KH.C2.821.v1.A.nonSL24-1
Possible name(s)
CCNA1; CCNA2; CCNB1
Gene model
Location
KhC2 [1,827,132 / 1,830,554]
Amino acid sequence
Length: 428
>KH.C2.821.v1.A.nonSL24-1
ITMSHNVLSTRSTSHVGDNRQKPFNENAGARPKTTQGRAVLGVISQNTASGRVQPFRAAK
QNATTEGFFSGQPPVQKLSGQNFKIFDECSSNNDAKVQQKPSVPAIASNQLHPALTALPS
TRQPLVNLPVNVSLSSVDSPMVLDTSDEERLNIFDIDSNAGIYGLSEYATEIFQHLREAE
QLHRPKPNYMRKQQDITVGMRAILVDWLVEVADEYKLHTETTHLAVNYIDRFLSHMAVLR
GKLQLVGAAAMFIAAKFEEIYPPDVGEFVYITDDTYTKKQVLRMEHLILKVLNFDVAVPT
SNQFLKRYLKSAGADKKTEFLAQFLCELALVEFDCTQYLPSMIAASSVCLASYTVSGKIW
DETMEHYMQYQLQDLAPCIKRLHEILAGASKNSLQALFEKYKDAKYDCVSNITATPTLPF
DEMEAEEC
Nucleotide sequence
Length: 1,960
>KH2012:KH.C2.821.v1.A.nonSL24-1
TCTCACAAGTAACTGCCGTGGACTGTTGTACAAGAAGCTTCTCTGAAATTACAACTTTTT
ACTTAAGAATTCATGCCAGCAGGAAAGCTTCATAAATAACCATGTCTCACAATGTACTTT
CAACACGTTCTACTTCTCATGTCGGGGATAATCGACAAAAACCTTTCAATGAAAATGCTG
GAGCAAGACCAAAGACAACTCAAGGACGTGCCGTTCTTGGTGTGATCAGTCAAAACACAG
CTTCTGGAAGAGTTCAACCATTTAGAGCTGCGAAACAGAATGCCACTACTGAAGGATTCT
TTAGTGGTCAACCACCTGTGCAGAAGCTGAGTGGTCAGAACTTCAAGATATTTGATGAAT
GCTCCTCAAACAATGATGCCAAAGTGCAGCAAAAACCTTCGGTTCCAGCCATTGCTTCAA
ACCAACTTCATCCAGCTCTTACTGCGCTTCCTTCTACAAGACAACCATTGGTTAATCTGC
CAGTCAATGTCTCCTTATCATCTGTTGATTCCCCTATGGTGCTTGACACATCAGATGAAG
AACGACTGAACATTTTTGACATTGATTCCAATGCCGGAATATACGGACTGTCAGAATACG
CAACTGAAATCTTTCAACACTTAAGGGAAGCTGAGCAATTACATCGGCCCAAGCCAAACT
ACATGCGAAAGCAGCAAGACATCACAGTTGGGATGCGAGCAATTCTTGTTGATTGGCTTG
TAGAGGTGGCAGACGAGTACAAGCTCCACACAGAAACCACGCATCTTGCTGTAAATTACA
TTGATCGCTTCTTGTCCCACATGGCTGTCCTCCGAGGGAAACTCCAGCTTGTTGGAGCTG
CTGCCATGTTCATTGCTGCGAAATTTGAAGAGATCTACCCACCAGATGTTGGTGAGTTTG
TTTACATCACCGATGACACTTACACCAAGAAGCAAGTATTACGCATGGAGCATCTCATTT
TGAAAGTTCTTAATTTTGATGTAGCAGTCCCAACGTCAAACCAGTTCCTTAAACGATACT
TGAAATCCGCTGGTGCTGACAAGAAAACTGAATTTCTTGCTCAGTTTCTTTGCGAATTGG
CATTGGTTGAGTTCGACTGCACACAATATCTTCCGTCCATGATTGCAGCTTCTTCAGTTT
GTTTGGCGAGTTACACTGTATCTGGAAAGATCTGGGATGAAACCATGGAACACTACATGC
AGTATCAACTTCAGGATCTAGCTCCTTGCATAAAACGCCTGCATGAGATCCTTGCTGGAG
CTTCCAAAAACTCGCTACAGGCGCTATTTGAGAAGTACAAGGATGCGAAGTATGACTGCG
TTTCAAACATTACAGCCACACCTACATTACCATTTGATGAAATGGAAGCTGAAGAGTGTT
GAGCTTGAGACTGCTCGTAATGAAGATGCTGGATTTGGTTGCAGGTCACAGTTGCTGCGT
CCCCAGCATCTTAAGTTCAAAACGTGTAGGAAATGAAGTTGGTCCTGCTGTTACTCACTG
CCATTTTACCGCAGTGCACCAGGCACTGTTTTTAATCCACTTATTTTTATCTGCCTGCCT
GCGCTACCATCTTGTTGGTAACGATCTGCTGTAACTGTGAATTATGTTTATCAGGTGTAA
ACTTTGATGTCAAAAAAACAGTTCTTGTGACAAAATGTTAGTTCGTCTTAAAATTCAAAG
TTTGTTTGACTTGTCCAAATCTTTTGTTCGATTCGTCCAAATTTATGTCTATAAAATCAA
GTCGAACTTTTGCTGTGCATTTATCATGTTAAATTGAGAGAAACCAAATTCTTATTGATT
GCTTCTGTTGGCCTGAATGTTACGGTTTTAAGTATTTTTCAGGGCGTTAGTTTTATTTAT
CTTTTGTTCTACGTTAGTTACAGTTTGCCCTTTTTAAATCTTAACATCTTCGTGCATACA
TTGGAACTATTTTACCCTTCAATAAACAATACTGAATTTT
| Pfam |
Cyclin-A_N (IPR032447) - T[28-146] 2.1E-6 |
| SUPERFAMILY |
Cyclin-like_sf (IPR036915) - T[165-296] 3.21E-51 - T[298-416] 1.79E-38 |
| Pfam |
Cyclin_N (IPR006671) - T[171-296] 3.1E-47 |
| CDD |
Cyclin-like (IPR013763) - T[200-289] 3.36654E-27 - T[298-383] 4.62191E-16 |
| SMART |
Cyclin-like (IPR013763) - T[206-290] 1.2E-29 - T[303-384] 1.1E-20 |
| Pfam |
Cyclin_C-dom (IPR004367) - T[299-413] 2.1E-33 |
| SMART |
Cyclin_C-dom (IPR004367) - T[299-415] 8.0E-37 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CCNB1_HUMAN | 36.466 % | 191 | 2.14E-56 |
| CCNA1_HUMAN | 56.934 % | 312 | 1.94E-102 |
| CCNA2_HUMAN | 47.059 % | 302 | 5.69E-99 |