- Transcript 'KH2012:KH.S1740.2.v1...' >
- Transcript 'Cisavi.CG.ENS81.R12....' >
- Clone 'cien61617' >
- Transcript 'Cisavi.CG.ENS81.R13....' >
- Transcript 'KH2012:KH.C2.718.v1....'
Transcript Model
Transcript Id
KH2012:KH.C2.718.v1.A.ND1-1
Possible name(s)
TBC1D15; TBC1D17; TBC1D25
Gene model
Location
KhC2 [27,869 / 35,990]
Amino acid sequence
Length: 617
>KH.C2.718.v1.A.ND1-1
MSHKKIKKSCFSFCILNFVCIVQVVFEQPGVFIHLIVNPDEEDKLLSGTLSVYEESGYKY
FKWSRVSSAPLPSDEHDTQVLSGTSSAVVASDATHVSPVQTQEITSELRQPSVSPEPNSS
DPDWTVVADSNKHEDSFEMDVASSESQKTFPFKYDFTVDIEDLRYIRKSKKGLNWKYLVL
ELKDGANLPTLHFHEGGSKNFLKAIESYVMLAQSSKVTRTLEVMPHNNNALTQSFDELNL
FGENGQQTSSQRRGFLETPISSAYSGLSKVTNYIQDFLNPAEVHYQTRPKHERATLVPDE
ATEAVGSSRIQIKQEEDTAGGFEMITCADLGPRSEPTRSLPINEEFWNNHKDEEGRIIDV
DEVKRSIFRGGIDSNLRKEVWKYLLNYYIWDKTTAELKEHKEIKEENYYRMKMQWKSIDA
DQESRFTAIRENKSLIDKDVTRTDRTRIFYEGQENVSLKLLNDVLMTYCMFNFDLGYVQG
MSDLLSPILEVMGSEVDAFWCFVGYMDIVQHNFDLNQRGMKVQLRDLHTLIQYMEPKLWD
HLEEKESSNLYFCFRWLLIRFKREFSFEDIQTLWEHVNEMSGKIELQATLRKAEGIYLQL
AACRKDLPDSIRQILDL
Nucleotide sequence
Length: 2,384
>KH2012:KH.C2.718.v1.A.ND1-1
ATGTCGCACAAAAAAATAAAAAAATCGTGCTTTTCATTTTGTATACTGAATTTTGTATGT
ATTGTACAGGTTGTGTTTGAACAACCGGGAGTTTTTATTCATCTCATCGTAAATCCAGAT
GAAGAGGATAAACTGCTAAGTGGAACACTTAGTGTATATGAGGAGAGTGGTTACAAATAC
TTTAAATGGAGCCGGGTATCTTCTGCACCTTTACCTTCAGATGAACATGACACCCAAGTT
CTTAGTGGAACATCAAGTGCAGTTGTTGCTAGTGATGCAACGCATGTATCACCAGTCCAA
ACACAAGAAATCACATCCGAGTTGAGACAACCATCTGTTTCACCTGAACCCAATTCCTCA
GATCCTGATTGGACAGTGGTTGCCGATAGCAACAAACATGAAGATTCATTTGAAATGGAT
GTTGCTTCATCAGAATCGCAGAAAACCTTTCCATTCAAATATGACTTCACTGTGGATATT
GAGGATTTACGTTATATTAGAAAGTCCAAAAAAGGTTTAAACTGGAAATATTTGGTCCTT
GAGTTGAAAGATGGAGCAAATTTACCAACCCTTCATTTTCATGAGGGTGGATCTAAAAAC
TTCTTGAAGGCAATCGAAAGTTATGTGATGCTTGCTCAATCATCAAAAGTTACCCGAACT
TTGGAAGTTATGCCACACAACAACAATGCACTTACTCAATCTTTTGACGAATTAAATTTG
TTTGGTGAAAATGGACAACAAACTTCTTCACAAAGAAGAGGATTTTTAGAAACCCCAATT
TCCAGTGCATACAGTGGGCTGTCAAAAGTGACCAACTACATTCAAGATTTCCTAAATCCC
GCTGAGGTTCATTACCAGACTCGGCCGAAACACGAACGAGCTACTCTTGTTCCAGATGAA
GCCACAGAAGCGGTTGGATCCAGTCGGATACAGATTAAACAAGAAGAGGACACGGCTGGA
GGTTTCGAAATGATAACTTGTGCGGACCTTGGACCTCGTTCCGAACCAACAAGGTCACTT
CCTATAAATGAAGAGTTTTGGAACAATCATAAAGATGAAGAAGGAAGGATTATTGATGTC
GATGAAGTTAAAAGATCTATTTTTCGTGGTGGAATTGATTCAAATTTGAGGAAAGAAGTT
TGGAAATATTTATTAAATTATTATATTTGGGATAAAACAACAGCTGAGCTCAAGGAACAC
AAGGAAATAAAAGAAGAAAACTATTACCGAATGAAAATGCAATGGAAATCAATTGACGCC
GACCAAGAAAGTCGTTTCACCGCTATCAGAGAAAACAAATCATTAATTGACAAAGATGTT
ACAAGAACTGACAGAACCCGAATATTCTACGAAGGTCAAGAAAATGTCAGTCTCAAGTTG
CTTAATGACGTTCTGATGACGTATTGCATGTTCAACTTTGACCTCGGTTATGTGCAAGGT
ATGAGTGATCTTCTCTCTCCAATACTTGAAGTTATGGGAAGCGAAGTTGATGCTTTCTGG
TGTTTCGTTGGTTATATGGATATTGTGCAACATAACTTCGATCTCAACCAACGTGGAATG
AAAGTACAGTTGCGCGACCTCCACACGTTGATACAATACATGGAACCGAAGTTGTGGGAC
CATTTGGAAGAAAAAGAATCTTCCAACCTTTACTTCTGCTTCAGATGGCTACTTATTCGA
TTTAAAAGAGAGTTCTCATTTGAAGACATACAAACCCTATGGGAGCACGTAAATGAAATG
TCGGGTAAAATCGAGCTCCAAGCCACACTAAGGAAAGCAGAAGGTATTTATCTTCAACTT
GCTGCTTGTAGGAAAGATTTACCAGACAGCATTCGACAAATACTCGATCTGTAAACATCC
TACTCGTGGGGTGATGTCATACTTTTATAGTATGACGTTTCACTTTCTGATTTGTTAATT
CATTGCGGTCTTCGTTTTTATATATCTTAAAATCATTGGCTTGAAAATATTCTTACGCAA
CATTATGCTCTGAAACATCTCATTCATAAACCATTCTGTCGTCTTTATCATCATTTTTAG
ACTAAAGCAGTTTTAGGGTGACGAATTATTTTCCATAACTTCGTGTTATTTTTACCATTT
TTTCTTCGTTAAATGTAAATTTCTTAATTTTTTGTAACCACACCGGCAGGCATATTACTG
TCGTTTACGAAATGTAAATATAGCAGAAACGGCATATTTACAGTTTCATTTAAAAATAAA
ATCGGTGATAAATGCGTGGTGGGTTGGCGTTTTTTTTCTTTCCATTTTTTGCATATGAAG
CACTTAGAAATCGTGTTTACCACAGTTTCTCTTTCTGTGACAATTAAATAGCTTGTTACC
ATGTCATGTGAAGATCACTTGCATTTAACTTAATTTATAATAGC
| Pfam |
DUF3548 (IPR021935) - T[23-247] 2.7E-31 |
| SUPERFAMILY |
Rab-GTPase_TBC_sf (IPR035969) - T[345-541] 5.89E-50 |
| SMART |
Rab-GTPase-TBC_dom (IPR000195) - T[368-601] 1.9E-39 |
| ProSiteProfiles |
Rab-GTPase-TBC_dom (IPR000195) - T[371-581] 34.734 |
| Pfam |
Rab-GTPase-TBC_dom (IPR000195) - T[375-577] 3.3E-41 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBC25_HUMAN | 35.593 % | 167 | 5.2E-44 |
| TBC15_HUMAN | 39.538 % | 421 | 1.83E-139 |
| TBC17_HUMAN | 37.206 % | 407 | 1.09E-134 |