- Transcript 'Cisavi.CG.ENS81.R0.1...' >
- Transcript 'KH2012:KH.C1.38.v1.A...' >
- Clone 'cima821028' >
- Transcript 'KH2012:KH.C2.714.v3....'
Transcript Model
Transcript Id
KH2012:KH.C2.714.v3.A.nonSL5-2
Possible name(s)
DCAF13; KATNB1; POC1B
Gene model
Location
KhC2 [2,629,504 / 2,634,368]
Amino acid sequence
Length: 457
>KH.C2.714.v3.A.nonSL5-2
STKYYIRNHQTMKVKVLSRNPDDYLRETKRDIHKVFRNYNPVLHPFEAPREYMRALNATK
LDRVFAKPFLASLDGHRDGVCCLCKHRKRLSYLFSGSCDGEIRQWNLTNRQCIRTLQGHT
GFVRGLACSPDGKRFISVGDDKTVKHWNSDPLSEERDIPINTVVAKSLYTGVDHHWTDSI
YATCGQSVDIWNMERSEPVRVYKWGMDSIQSVKFNPVETNLCISTVSDRSIRLYDIRAAV
PLNKVTLKLRSNVAVWNPMEAYNFTAANEDHNLYTFDMRKLDFALNVHTDHTDAVLDVDY
SPTGRELVSGSYDRTIRIFPVSGTGHSREVYHTKRMQRVFTVKWSADNRYILSGSDETNI
RMWKARASEKLGRMTPREKAAADYNEKLKLKYAYHPQVKRIARHRHVPKTIYQAMKEKKL
IKDSQRKKEQNLRANSKPGTVPRVPEKLKHIVLPPQE
Nucleotide sequence
Length: 1,786
>KH2012:KH.C2.714.v3.A.nonSL5-2
AGATATATAAAGAGCCGCATGTGTGCCGTGTGGTGTACTGTAGTTTGTATAATGTACATC
TCAAATTAAAGTGAAACTTATTTCTCTGATCTACAAAATATTACATACGTAACCATCAAA
CCATGAAGGTAAAAGTTCTATCTAGAAACCCTGATGATTACCTGCGAGAAACTAAACGTG
ACATACACAAAGTTTTCCGCAACTACAACCCTGTCCTCCACCCCTTTGAGGCTCCAAGAG
AGTATATGAGAGCTTTGAATGCTACGAAACTTGACAGAGTCTTTGCTAAACCGTTTCTAG
CTTCACTAGATGGACACCGTGACGGTGTTTGCTGCTTATGTAAACATAGAAAGAGATTGA
GTTATTTATTTTCGGGATCCTGTGATGGAGAGATACGTCAATGGAATCTCACTAACAGGC
AATGTATCCGAACATTACAAGGTCATACTGGGTTTGTAAGAGGTTTAGCATGTTCACCAG
ATGGAAAGAGGTTCATATCAGTTGGTGATGATAAAACAGTAAAACATTGGAACTCAGATC
CTCTCAGTGAAGAAAGAGACATTCCTATCAACACAGTGGTAGCTAAGTCCCTGTATACTG
GTGTTGATCACCATTGGACGGATTCAATATATGCAACATGTGGACAATCTGTTGATATTT
GGAATATGGAACGTTCAGAACCTGTCAGAGTTTATAAATGGGGGATGGATTCAATTCAAA
GTGTCAAGTTTAATCCTGTTGAAACTAATCTGTGTATAAGCACAGTTTCTGACCGAAGCA
TCAGACTTTATGACATTAGAGCTGCGGTGCCTCTCAATAAAGTAACATTAAAACTTCGAA
GTAATGTTGCTGTGTGGAATCCCATGGAAGCATACAATTTCACTGCTGCCAATGAAGACC
ATAACTTATATACATTTGATATGAGAAAATTGGATTTTGCATTGAATGTCCACACCGATC
ACACCGATGCTGTGCTTGATGTTGATTATTCACCAACTGGTCGCGAACTTGTATCTGGGA
GCTACGATAGGACGATACGAATATTTCCTGTGTCTGGTACTGGTCATAGTAGGGAAGTGT
ATCATACAAAACGAATGCAACGCGTATTTACTGTAAAGTGGTCAGCTGATAACAGGTATA
TTTTATCTGGATCTGATGAAACAAATATTCGAATGTGGAAAGCAAGGGCATCAGAGAAAC
TTGGAAGGATGACGCCTCGTGAAAAAGCAGCTGCTGATTATAATGAAAAATTAAAGCTGA
AATATGCCTACCATCCTCAAGTAAAGAGAATTGCACGCCACAGACATGTACCTAAAACTA
TTTATCAAGCTATGAAAGAAAAGAAATTGATAAAAGATTCTCAACGGAAAAAAGAGCAAA
ATCTGAGAGCCAACAGCAAGCCAGGGACTGTTCCACGGGTGCCAGAAAAATTAAAACACA
TTGTTTTGCCACCACAAGAGTAAATTGGACCCGTTGATGCAGGTTGTGTTGACTGTATTC
GTTCAAGGACTCCAGCTCGGAAAAGTCAGAAGTTGTATCTATTCGATCCATTGCATTCTT
CGGCGCAGAATATTGCAAATGGTCAATTGGTCAATTACACAACAGTGCGATACACGTTTT
TTCGAAATCAAACTACTTTATCAGAATTGTTTTTTTTTTCACAACAAAAAAAAGGTTATT
TCCAAAGCTAAACATTTTTGGCTGCTTTATTACAAATTTGATATTTTTACCCATTTTGAG
TGATTTAGCTAGGTGAAAGGCATTTCGTAATAAATTGTAATGGAAA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[51-152] 1.9E-22 - T[153-395] 1.6E-35 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[65-364] 1.2E-56 |
| SMART |
WD40_repeat (IPR001680) - T[66-106] 5.1E-5 - T[109-148] 2.7E-11 - T[195-235] 0.19 - T[281-320] 1.6E-5 - T[324-364] 0.14 |
| Pfam |
WD40_repeat (IPR001680) - T[70-106] 0.0016 - T[110-148] 5.3E-8 - T[288-319] 2.0E-4 - T[325-364] 0.0024 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[73-115] 10.508 - T[116-148] 12.38 - T[288-319] 11.444 - T[332-373] 10.676 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[73-373] 33.59 |
| Pfam |
Sof1 (IPR007287) - T[365-451] 4.0E-31 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DCA13_HUMAN | 62.385 % | 589 | 0 |