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TRANSCRIPT CARD

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  1. Clone 'man19m04' > 
  2. Transcript 'Phmamm.CG.MTP2014.S8...' > 
  3. Clone 'ma106h21' > 
  4. Clone 'cien56260' > 
  5. Transcript 'KH2012:KH.C2.714.v1....'

Transcript Model

Transcript Id

KH2012:KH.C2.714.v1.A.nonSL4-1

Possible name(s)

DCAF13; KATNB1; POC1B

Gene model

KH2012:KH.C2.714

Location

KhC2 [2,629,510 / 2,633,768]

Sequences

Amino acid sequence

Length: 457

>KH.C2.714.v1.A.nonSL4-1
STKYYIRNHQTMKVKVLSRNPDDYLRETKRDIHKVFRNYNPVLHPFEAPREYMRALNATK
LDRVFAKPFLASLDGHRDGVCCLCKHRKRLSYLFSGSCDGEIRQWNLTNRQCIRTLQGHT
GFVRGLACSPDGKRFISVGDDKTVKHWNSDPLSEERDIPINTVVAKSLYTGVDHHWTDSI
YATCGQSVDIWNMERSEPVRVYKWGMDSIQSVKFNPVETNLCISTVSDRSIRLYDIRAAV
PLNKVTLKLRSNVAVWNPMEAYNFTAANEDHNLYTFDMRKLDFALNVHTDHTDAVLDVDY
SPTGRELVSGSYDRTIRIFPVSGTGHSREVYHTKRMQRVFTVKWSADNRYILSGSDETNI
RMWKARASEKLGRMTPREKAAADYNEKLKLKYAYHPQVKRIARHRHVPKTIYQAMKEKKL
IKDSQRKKEQNLRANSKPGTVPRVPEKLKHIVLPPQE

Nucleotide sequence

Length: 1,662

>KH2012:KH.C2.714.v1.A.nonSL4-1
ATAAAGAGCCGCATGTGTGCCGTGTGGTGTACTGTAGTTTGTATAATGTACATCTCAAAT
TAAAGTGAAACTTATTTCTCTGATCTACAAAATATTACATACGTAACCATCAAACCATGA
AGGTAAAAGTTCTATCTAGAAACCCTGATGATTACCTGCGAGAAACTAAACGTGACATAC
ACAAAGTTTTCCGCAACTACAACCCTGTCCTCCACCCCTTTGAGGCTCCAAGAGAGTATA
TGAGAGCTTTGAATGCTACGAAACTTGACAGAGTCTTTGCTAAACCGTTTCTAGCTTCAC
TAGATGGACACCGTGACGGTGTTTGCTGCTTATGTAAACATAGAAAGAGATTGAGTTATT
TATTTTCGGGATCCTGTGATGGAGAGATACGTCAATGGAATCTCACTAACAGGCAATGTA
TCCGAACATTACAAGGTCATACTGGGTTTGTAAGAGGTTTAGCATGTTCACCAGATGGAA
AGAGGTTCATATCAGTTGGTGATGATAAAACAGTAAAACATTGGAACTCAGATCCTCTCA
GTGAAGAAAGAGACATTCCTATCAACACAGTGGTAGCTAAGTCCCTGTATACTGGTGTTG
ATCACCATTGGACGGATTCAATATATGCAACATGTGGACAATCTGTTGATATTTGGAATA
TGGAACGTTCAGAACCTGTCAGAGTTTATAAATGGGGGATGGATTCAATTCAAAGTGTCA
AGTTTAATCCTGTTGAAACTAATCTGTGTATAAGCACAGTTTCTGACCGAAGCATCAGAC
TTTATGACATTAGAGCTGCGGTGCCTCTCAATAAAGTAACATTAAAACTTCGAAGTAATG
TTGCTGTGTGGAATCCCATGGAAGCATACAATTTCACTGCTGCCAATGAAGACCATAACT
TATATACATTTGATATGAGAAAATTGGATTTTGCATTGAATGTCCACACCGATCACACCG
ATGCTGTGCTTGATGTTGATTATTCACCAACTGGTCGCGAACTTGTATCTGGGAGCTACG
ATAGGACGATACGAATATTTCCTGTGTCTGGTACTGGTCATAGTAGGGAAGTGTATCATA
CAAAACGAATGCAACGCGTATTTACTGTAAAGTGGTCAGCTGATAACAGGTATATTTTAT
CTGGATCTGATGAAACAAATATTCGAATGTGGAAAGCAAGGGCATCAGAGAAACTTGGAA
GGATGACGCCTCGTGAAAAAGCAGCTGCTGATTATAATGAAAAATTAAAGCTGAAATATG
CCTACCATCCTCAAGTAAAGAGAATTGCACGCCACAGACATGTACCTAAAACTATTTATC
AAGCTATGAAAGAAAAGAAATTGATAAAAGATTCTCAACGGAAAAAAGAGCAAAATCTGA
GAGCCAACAGCAAGCCAGGGACTGTTCCACGGGTGCCAGAAAAATTAAAACACATTGTTT
TGCCACCACAAGAGTAAATTGTTACAACAAAAGTTTTATTACAATTAACAACACAGTGAA
GAACATTGACATAATAAAATACTGTATTACCAACAACATTATGTGTATTTATCTTAATGG
CATGTCTTGCAATATATGATTAATGAACATTGTTAAATATGTAGAATGTGTTACAACAAC
TTAAACATTAAAACAACATGAATAAAGCAATATACCATAAAA

InterProScan

Gene3D
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[51-152] 1.9E-22 - T[153-395] 1.6E-35
SUPERFAMILY
WD40_repeat_dom_sf (IPR036322) - T[65-364] 1.2E-56
SMART
WD40_repeat (IPR001680) - T[66-106] 5.1E-5 - T[109-148] 2.7E-11 - T[195-235] 0.19 - T[281-320] 1.6E-5 - T[324-364] 0.14
Pfam
WD40_repeat (IPR001680) - T[70-106] 0.0016 - T[110-148] 5.3E-8 - T[288-319] 2.0E-4 - T[325-364] 0.0024
ProSiteProfiles
WD40_repeat (IPR001680) - T[73-115] 10.508 - T[116-148] 12.38 - T[288-319] 11.444 - T[332-373] 10.676
ProSiteProfiles
WD40_repeat_dom (IPR017986) - T[73-373] 33.59
Pfam
Sof1 (IPR007287) - T[365-451] 4.0E-31

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DCA13_HUMAN 62.385 % 589 0