- Transcript 'KH2012:KH.C11.112.v3...' >
- Transcript 'KH2012:KH.C2.702.v1....'
Transcript Model
Transcript Id
KH2012:KH.C2.702.v1.R.ND1-1
Possible name(s)
ARHGAP1; ARHGAP8; PRR5-ARHGAP8
Gene model
Location
KhC2 [1,174,336 / 1,180,238]
Amino acid sequence
Length: 440
>KH.C2.702.v1.R.ND1-1
LNRLCHHDYKEMGCCCGKRTAIVNPYDGHKATIGASQVTPYPEIGDTARPTSKSAWLDDE
TRAKEEFADIAKYGIIEVSGVDTSGRPVIVVSASKLPSNKELDHKKLLRYLKFSLDKYVE
SDYSVVYLHYGLNSSNKPSFSWLREAYKEFDRKYKKNLKSLYLVHPTTFIRILMNVFKPL
ISVKFGRKMSYVNYLHEIADVVHLDQLPIPQDVLDHDRELVKKLNKAETRPRDASDSDKP
VEPLTTQQFGVSLDFLNTNNPGYNIPKVVQDTISYIKENGLSTEGLFRRSASAIALREVQ
KLYNAGTTVVFDDPHLAAVTLKAFLRQLPEPVLTFQLYEYILNISRVEEETRVRVVSSLL
QKLPRLNFILLKYIMDFLAIVAAHSDENRMTFSNLAVVFGPKLAWSTDQAASLVAMGPIN
TFTMLMLQNHEQLFAEDSDC
Nucleotide sequence
Length: 2,154
>KH2012:KH.C2.702.v1.R.ND1-1
CTTTGGCCAGCTAATGTAATGTGACTTAGTGACTAAATAGATTATGTCACCATGATTATA
AAGAAATGGGTTGTTGCTGTGGGAAACGCACTGCTATAGTTAATCCTTATGATGGTCACA
AAGCTACCATAGGAGCATCACAAGTGACCCCTTATCCCGAAATAGGGGATACCGCACGTC
CTACATCTAAGTCAGCATGGCTGGATGATGAGACTCGAGCCAAAGAAGAATTTGCAGATA
TTGCTAAATATGGAATAATAGAGGTATCAGGAGTTGATACAAGTGGACGACCAGTGATCG
TGGTGAGTGCTTCAAAACTTCCTTCTAATAAGGAACTAGATCACAAGAAATTGTTAAGGT
ATTTGAAGTTCAGCTTGGACAAGTATGTGGAGTCCGATTACAGTGTGGTTTACCTTCACT
ATGGTCTTAACAGCTCAAACAAACCATCGTTTTCATGGTTGCGTGAAGCTTATAAGGAGT
TTGATCGAAAATATAAAAAAAATCTGAAATCCTTATACCTTGTTCATCCGACCACCTTCA
TAAGAATCCTAATGAATGTATTCAAACCACTAATCAGTGTGAAGTTTGGTCGCAAGATGA
GTTATGTTAACTATTTGCATGAAATAGCAGATGTGGTGCACCTTGATCAACTTCCAATAC
CACAGGATGTACTTGATCATGATCGTGAATTGGTGAAGAAGTTAAACAAAGCAGAGACTC
GTCCTCGTGATGCATCGGATAGTGACAAACCAGTTGAACCGTTGACCACACAACAATTTG
GTGTCTCACTTGATTTTTTGAACACAAATAATCCAGGCTACAACATTCCCAAAGTTGTGC
AAGATACTATATCATATATTAAAGAAAATGGTTTAAGCACGGAAGGTTTATTTCGACGAT
CTGCATCAGCGATTGCATTACGTGAAGTTCAAAAGCTCTATAATGCTGGGACTACAGTTG
TGTTTGATGATCCACACTTGGCTGCTGTCACGCTCAAAGCATTTCTTCGTCAGCTTCCTG
AACCAGTGCTTACTTTTCAACTTTATGAATATATTCTTAACATCTCAAGAGTTGAAGAAG
AGACAAGAGTCAGAGTTGTTTCTTCTCTCCTTCAAAAACTTCCAAGATTAAACTTCATCT
TACTCAAATATATCATGGATTTCCTAGCAATTGTTGCTGCGCATTCGGATGAGAATCGAA
TGACCTTCAGCAACCTTGCTGTTGTGTTCGGACCAAAACTAGCTTGGTCAACTGATCAGG
CTGCATCCTTGGTGGCAATGGGTCCAATCAACACTTTCACAATGCTGATGCTTCAAAATC
ATGAACAACTGTTCGCTGAAGACTCAGATTGCTAACCACACTTATGACATCACAATGGTA
ACCTTTATATTGACTAGACTTAGTGCGGTGGTGGTATCTTGTAATATTGCCCATATTTGT
ACATGCGGAAGCTAGTTCTAGTGTTGAAGCTGGTTTTTATTTGATTTCAAACTGTCCCAG
TATTTGTAGATATGGAGTGTGAACTAACACACTATAATGAATAAGTCAAACATACTGGGT
TACACAGTAAGAGTACAAACAAGTTTATTAAAATCTGTTATATAAATATTGTTTTATGCA
CTTTGTATTTTAAGCATACAAAAACAACCCTTTCCTAATGTTTAAACAACATGATCTGGT
TAATATTACATTTATTCTAACCCCCCCTAAAACATTCAACCAAAACAATCATTACATTTA
TTCACATATTCTAGACAGAAAAATACACCCATTTTATTCTGGTAATGTGTAAATTATTGC
CGTATGTATGGAGTGTTGAATGTATTCTATTGATTTTAAATGTGCAATGCTCATACACTG
TGTAACTTCATTTCCGTTGTGTTGCGGATATTCCACTTCTGTAGCAAGTTATCTAAAGTT
TCAAACACCGCTGCTGGCGTAACCACTTTTTCTGCCTACCTTTTTTAACTTACCACACAA
AAACTAGAATGTAGAGTTGACATTTTAAATACGTTGAAACAAAAAATTATCAAAATTGGC
AAAATCCATTGCTGGCAGTGGTTGAGTTTTCGCAATTGTAGGACTATATTATTACTTGTA
TAATGTAAAACCTACCGCCTGCTTCATTTTAACCAAATACATTATAGAAACATA
| CDD |
CRAL-TRIO_dom (IPR001251) - T[64-210] 5.62367E-27 |
| ProSiteProfiles |
CRAL-TRIO_dom (IPR001251) - T[66-221] 14.156 |
| SUPERFAMILY |
CRAL-TRIO_dom_sf (IPR036865) - T[66-209] 1.57E-24 |
| SMART |
CRAL-TRIO_dom (IPR001251) - T[67-216] 8.1E-19 |
| Gene3D |
CRAL-TRIO_dom_sf (IPR036865) - T[69-222] 1.5E-44 |
| Pfam |
CRAL-TRIO_dom (IPR001251) - T[85-219] 1.5E-36 |
| Gene3D |
Rho_GTPase_activation_prot (IPR008936) - T[242-434] 7.6E-58 |
| SUPERFAMILY |
Rho_GTPase_activation_prot (IPR008936) - T[245-434] 1.51E-50 |
| ProSiteProfiles |
RhoGAP_dom (IPR000198) - T[251-434] 40.234 |
| SMART |
RhoGAP_dom (IPR000198) - T[263-431] 3.2E-49 |
| Pfam |
RhoGAP_dom (IPR000198) - T[266-409] 1.5E-39 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RHG17_HUMAN | 32.609 % | 111 | 3.73E-26 |
| RHG01_HUMAN | 51.613 % | 375 | 2.78E-127 |
| RHG08_HUMAN | 46.845 % | 358 | 1.41E-120 |