- Transcript 'KH2012:KH.C5.392.v2....' >
- Transcript 'KH2012:KH.C2.702.v1....'
Transcript Model
Transcript Id
KH2012:KH.C2.702.v1.A.SL4-1
Possible name(s)
ARHGAP1; ARHGAP8; PRR5-ARHGAP8
Gene model
Location
KhC2 [1,174,336 / 1,180,251]
Amino acid sequence
Length: 440
>KH.C2.702.v1.A.SL4-1
LNRLCHHDYKEMGCCCGKRTAIVNPYDGHKATIGASQVTPYPEIGDTARPTSKSAWLDDE
TRAKEEFADIAKYGIIEVSGVDTSGRPVIVVSASKLPSNKELDHKKLLRYLKFSLDKYVE
SDYSVVYLHYGLNSSNKPSFSWLREAYKEFDRKYKKNLKSLYLVHPTTFIRILMNVFKPL
ISVKFGRKMSYVNYLHEIADVVHLDQLPIPQDVLDHDRELVKKLNKAETRPRDASDSDKP
VEPLTTQQFGVSLDFLNTNNPGYNIPKVVQDTISYIKENGLSTEGLFRRSASAIALREVQ
KLYNAGTTVVFDDPHLAAVTLKAFLRQLPEPVLTFQLYEYILNISRVEEETRVRVVSSLL
QKLPRLNFILLKYIMDFLAIVAAHSDENRMTFSNLAVVFGPKLAWSTDQAASLVAMGPIN
TFTMLMLQNHEQLFAEDSDC
Nucleotide sequence
Length: 2,167
>KH2012:KH.C2.702.v1.A.SL4-1
ATTTATTTCAGATCTTTGGCCAGCTAATGTAATGTGACTTAGTGACTAAATAGATTATGT
CACCATGATTATAAAGAAATGGGTTGTTGCTGTGGGAAACGCACTGCTATAGTTAATCCT
TATGATGGTCACAAAGCTACCATAGGAGCATCACAAGTGACCCCTTATCCCGAAATAGGG
GATACCGCACGTCCTACATCTAAGTCAGCATGGCTGGATGATGAGACTCGAGCCAAAGAA
GAATTTGCAGATATTGCTAAATATGGAATAATAGAGGTATCAGGAGTTGATACAAGTGGA
CGACCAGTGATCGTGGTGAGTGCTTCAAAACTTCCTTCTAATAAGGAACTAGATCACAAG
AAATTGTTAAGGTATTTGAAGTTCAGCTTGGACAAGTATGTGGAGTCCGATTACAGTGTG
GTTTACCTTCACTATGGTCTTAACAGCTCAAACAAACCATCGTTTTCATGGTTGCGTGAA
GCTTATAAGGAGTTTGATCGAAAATATAAAAAAAATCTGAAATCCTTATACCTTGTTCAT
CCGACCACCTTCATAAGAATCCTAATGAATGTATTCAAACCACTAATCAGTGTGAAGTTT
GGTCGCAAGATGAGTTATGTTAACTATTTGCATGAAATAGCAGATGTGGTGCACCTTGAT
CAACTTCCAATACCACAGGATGTACTTGATCATGATCGTGAATTGGTGAAGAAGTTAAAC
AAAGCAGAGACTCGTCCTCGTGATGCATCGGATAGTGACAAACCAGTTGAACCGTTGACC
ACACAACAATTTGGTGTCTCACTTGATTTTTTGAACACAAATAATCCAGGCTACAACATT
CCCAAAGTTGTGCAAGATACTATATCATATATTAAAGAAAATGGTTTAAGCACGGAAGGT
TTATTTCGACGATCTGCATCAGCGATTGCATTACGTGAAGTTCAAAAGCTCTATAATGCT
GGGACTACAGTTGTGTTTGATGATCCACACTTGGCTGCTGTCACGCTCAAAGCATTTCTT
CGTCAGCTTCCTGAACCAGTGCTTACTTTTCAACTTTATGAATATATTCTTAACATCTCA
AGAGTTGAAGAAGAGACAAGAGTCAGAGTTGTTTCTTCTCTCCTTCAAAAACTTCCAAGA
TTAAACTTCATCTTACTCAAATATATCATGGATTTCCTAGCAATTGTTGCTGCGCATTCG
GATGAGAATCGAATGACCTTCAGCAACCTTGCTGTTGTGTTCGGACCAAAACTAGCTTGG
TCAACTGATCAGGCTGCATCCTTGGTGGCAATGGGTCCAATCAACACTTTCACAATGCTG
ATGCTTCAAAATCATGAACAACTGTTCGCTGAAGACTCAGATTGCTAACCACACTTATGA
CATCACAATGGTAACCTTTATATTGACTAGACTTAGTGCGGTGGTGGTATCTTGTAATAT
TGCCCATATTTGTACATGCGGAAGCTAGTTCTAGTGTTGAAGCTGGTTTTTATTTGATTT
CAAACTGTCCCAGTATTTGTAGATATGGAGTGTGAACTAACACACTATAATGAATAAGTC
AAACATACTGGGTTACACAGTAAGAGTACAAACAAGTTTATTAAAATCTGTTATATAAAT
ATTGTTTTATGCACTTTGTATTTTAAGCATACAAAAACAACCCTTTCCTAATGTTTAAAC
AACATGATCTGGTTAATATTACATTTATTCTAACCCCCCCTAAAACATTCAACCAAAACA
ATCATTACATTTATTCACATATTCTAGACAGAAAAATACACCCATTTTATTCTGGTAATG
TGTAAATTATTGCCGTATGTATGGAGTGTTGAATGTATTCTATTGATTTTAAATGTGCAA
TGCTCATACACTGTGTAACTTCATTTCCGTTGTGTTGCGGATATTCCACTTCTGTAGCAA
GTTATCTAAAGTTTCAAACACCGCTGCTGGCGTAACCACTTTTTCTGCCTACCTTTTTTA
ACTTACCACACAAAAACTAGAATGTAGAGTTGACATTTTAAATACGTTGAAACAAAAAAT
TATCAAAATTGGCAAAATCCATTGCTGGCAGTGGTTGAGTTTTCGCAATTGTAGGACTAT
ATTATTACTTGTATAATGTAAAACCTACCGCCTGCTTCATTTTAACCAAATACATTATAG
AAACATA
| CDD |
CRAL-TRIO_dom (IPR001251) - T[64-210] 5.62367E-27 |
| ProSiteProfiles |
CRAL-TRIO_dom (IPR001251) - T[66-221] 14.156 |
| SUPERFAMILY |
CRAL-TRIO_dom_sf (IPR036865) - T[66-209] 1.57E-24 |
| SMART |
CRAL-TRIO_dom (IPR001251) - T[67-216] 8.1E-19 |
| Gene3D |
CRAL-TRIO_dom_sf (IPR036865) - T[69-222] 1.5E-44 |
| Pfam |
CRAL-TRIO_dom (IPR001251) - T[85-219] 1.5E-36 |
| Gene3D |
Rho_GTPase_activation_prot (IPR008936) - T[242-434] 7.6E-58 |
| SUPERFAMILY |
Rho_GTPase_activation_prot (IPR008936) - T[245-434] 1.51E-50 |
| ProSiteProfiles |
RhoGAP_dom (IPR000198) - T[251-434] 40.234 |
| SMART |
RhoGAP_dom (IPR000198) - T[263-431] 3.2E-49 |
| Pfam |
RhoGAP_dom (IPR000198) - T[266-409] 1.5E-39 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RHG17_HUMAN | 32.609 % | 111 | 3.73E-26 |
| RHG01_HUMAN | 51.613 % | 375 | 2.78E-127 |
| RHG08_HUMAN | 46.845 % | 358 | 1.41E-120 |