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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C7.389.v1....'
  2. Clone 'cien184358'
  3. Clone 'cien176430'
  4. Transcript 'KH2012:KH.C2.702.v1....'

Transcript Model

Transcript Id

KH2012:KH.C2.702.v1.A.SL3-1

Possible name(s)

ARHGAP1; ARHGAP8; PRR5-ARHGAP8

Location

KhC2 [1,174,336 / 1,180,240]

Sequences

Amino acid sequence

Length: 440

>KH.C2.702.v1.A.SL3-1
LNRLCHHDYKEMGCCCGKRTAIVNPYDGHKATIGASQVTPYPEIGDTARPTSKSAWLDDE
TRAKEEFADIAKYGIIEVSGVDTSGRPVIVVSASKLPSNKELDHKKLLRYLKFSLDKYVE
SDYSVVYLHYGLNSSNKPSFSWLREAYKEFDRKYKKNLKSLYLVHPTTFIRILMNVFKPL
ISVKFGRKMSYVNYLHEIADVVHLDQLPIPQDVLDHDRELVKKLNKAETRPRDASDSDKP
VEPLTTQQFGVSLDFLNTNNPGYNIPKVVQDTISYIKENGLSTEGLFRRSASAIALREVQ
KLYNAGTTVVFDDPHLAAVTLKAFLRQLPEPVLTFQLYEYILNISRVEEETRVRVVSSLL
QKLPRLNFILLKYIMDFLAIVAAHSDENRMTFSNLAVVFGPKLAWSTDQAASLVAMGPIN
TFTMLMLQNHEQLFAEDSDC

Nucleotide sequence

Length: 2,156

>KH2012:KH.C2.702.v1.A.SL3-1
ATCTTTGGCCAGCTAATGTAATGTGACTTAGTGACTAAATAGATTATGTCACCATGATTA
TAAAGAAATGGGTTGTTGCTGTGGGAAACGCACTGCTATAGTTAATCCTTATGATGGTCA
CAAAGCTACCATAGGAGCATCACAAGTGACCCCTTATCCCGAAATAGGGGATACCGCACG
TCCTACATCTAAGTCAGCATGGCTGGATGATGAGACTCGAGCCAAAGAAGAATTTGCAGA
TATTGCTAAATATGGAATAATAGAGGTATCAGGAGTTGATACAAGTGGACGACCAGTGAT
CGTGGTGAGTGCTTCAAAACTTCCTTCTAATAAGGAACTAGATCACAAGAAATTGTTAAG
GTATTTGAAGTTCAGCTTGGACAAGTATGTGGAGTCCGATTACAGTGTGGTTTACCTTCA
CTATGGTCTTAACAGCTCAAACAAACCATCGTTTTCATGGTTGCGTGAAGCTTATAAGGA
GTTTGATCGAAAATATAAAAAAAATCTGAAATCCTTATACCTTGTTCATCCGACCACCTT
CATAAGAATCCTAATGAATGTATTCAAACCACTAATCAGTGTGAAGTTTGGTCGCAAGAT
GAGTTATGTTAACTATTTGCATGAAATAGCAGATGTGGTGCACCTTGATCAACTTCCAAT
ACCACAGGATGTACTTGATCATGATCGTGAATTGGTGAAGAAGTTAAACAAAGCAGAGAC
TCGTCCTCGTGATGCATCGGATAGTGACAAACCAGTTGAACCGTTGACCACACAACAATT
TGGTGTCTCACTTGATTTTTTGAACACAAATAATCCAGGCTACAACATTCCCAAAGTTGT
GCAAGATACTATATCATATATTAAAGAAAATGGTTTAAGCACGGAAGGTTTATTTCGACG
ATCTGCATCAGCGATTGCATTACGTGAAGTTCAAAAGCTCTATAATGCTGGGACTACAGT
TGTGTTTGATGATCCACACTTGGCTGCTGTCACGCTCAAAGCATTTCTTCGTCAGCTTCC
TGAACCAGTGCTTACTTTTCAACTTTATGAATATATTCTTAACATCTCAAGAGTTGAAGA
AGAGACAAGAGTCAGAGTTGTTTCTTCTCTCCTTCAAAAACTTCCAAGATTAAACTTCAT
CTTACTCAAATATATCATGGATTTCCTAGCAATTGTTGCTGCGCATTCGGATGAGAATCG
AATGACCTTCAGCAACCTTGCTGTTGTGTTCGGACCAAAACTAGCTTGGTCAACTGATCA
GGCTGCATCCTTGGTGGCAATGGGTCCAATCAACACTTTCACAATGCTGATGCTTCAAAA
TCATGAACAACTGTTCGCTGAAGACTCAGATTGCTAACCACACTTATGACATCACAATGG
TAACCTTTATATTGACTAGACTTAGTGCGGTGGTGGTATCTTGTAATATTGCCCATATTT
GTACATGCGGAAGCTAGTTCTAGTGTTGAAGCTGGTTTTTATTTGATTTCAAACTGTCCC
AGTATTTGTAGATATGGAGTGTGAACTAACACACTATAATGAATAAGTCAAACATACTGG
GTTACACAGTAAGAGTACAAACAAGTTTATTAAAATCTGTTATATAAATATTGTTTTATG
CACTTTGTATTTTAAGCATACAAAAACAACCCTTTCCTAATGTTTAAACAACATGATCTG
GTTAATATTACATTTATTCTAACCCCCCCTAAAACATTCAACCAAAACAATCATTACATT
TATTCACATATTCTAGACAGAAAAATACACCCATTTTATTCTGGTAATGTGTAAATTATT
GCCGTATGTATGGAGTGTTGAATGTATTCTATTGATTTTAAATGTGCAATGCTCATACAC
TGTGTAACTTCATTTCCGTTGTGTTGCGGATATTCCACTTCTGTAGCAAGTTATCTAAAG
TTTCAAACACCGCTGCTGGCGTAACCACTTTTTCTGCCTACCTTTTTTAACTTACCACAC
AAAAACTAGAATGTAGAGTTGACATTTTAAATACGTTGAAACAAAAAATTATCAAAATTG
GCAAAATCCATTGCTGGCAGTGGTTGAGTTTTCGCAATTGTAGGACTATATTATTACTTG
TATAATGTAAAACCTACCGCCTGCTTCATTTTAACCAAATACATTATAGAAACATA

InterProScan

CDD
CRAL-TRIO_dom (IPR001251) - T[64-210] 5.62367E-27
ProSiteProfiles
CRAL-TRIO_dom (IPR001251) - T[66-221] 14.156
SUPERFAMILY
CRAL-TRIO_dom_sf (IPR036865) - T[66-209] 1.57E-24
SMART
CRAL-TRIO_dom (IPR001251) - T[67-216] 8.1E-19
Gene3D
CRAL-TRIO_dom_sf (IPR036865) - T[69-222] 1.5E-44
Pfam
CRAL-TRIO_dom (IPR001251) - T[85-219] 1.5E-36
Gene3D
Rho_GTPase_activation_prot (IPR008936) - T[242-434] 7.6E-58
SUPERFAMILY
Rho_GTPase_activation_prot (IPR008936) - T[245-434] 1.51E-50
ProSiteProfiles
RhoGAP_dom (IPR000198) - T[251-434] 40.234
SMART
RhoGAP_dom (IPR000198) - T[263-431] 3.2E-49
Pfam
RhoGAP_dom (IPR000198) - T[266-409] 1.5E-39

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RHG17_HUMAN 32.609 % 111 3.73E-26
RHG01_HUMAN 51.613 % 375 2.78E-127
RHG08_HUMAN 46.845 % 358 1.41E-120