Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C2.693.v1.A.nonSL21-1

Possible name(s)

RPS3A

Gene model

KH2012:KH.C2.693

Location

KhC2 [2,684,400 / 2,688,009]

Sequences

Amino acid sequence

Length: 270

>KH.C2.693.v1.A.nonSL21-1
TQCRMAVGKNKRLTKGGKKGGKKKIVDPFSKKDWYDVKAPAVFKNRQIGKTLVSRTVGTK
IAADGLKGRVFECNQADLHGDESTYRKMKLIVEDVQGKHCLTNFHGMSLTRDKLCSMVKK
WQTLIEASCDVSTTDGYKVRMFCIGFTHRRSNQIKKTSYAQHMQVINIRAKMIEIMTREV
NLGNLRELVNKLIPDSIAKDIEKACQGIYPLHDVHIRKVKVLKKPKLDLGRLMEMHGEGS
AKTGQSKSDTGSKVERSGGDSYEPPVQDSV

Nucleotide sequence

Length: 1,260

>KH2012:KH.C2.693.v1.A.nonSL21-1
CAACACAGTGCAGGATGGCCGTGGGTAAAAATAAACGCCTGACCAAAGGGGGCAAAAAGG
GTGGAAAAAAGAAGATCGTCGACCCATTCTCCAAGAAGGATTGGTATGATGTAAAGGCTC
CAGCCGTGTTCAAAAACCGTCAAATCGGTAAAACTTTGGTGTCAAGAACCGTTGGAACAA
AAATTGCAGCTGATGGTTTAAAAGGCCGAGTCTTTGAGTGCAATCAGGCTGATTTGCATG
GCGACGAATCAACTTATCGAAAGATGAAGTTGATTGTTGAAGATGTTCAAGGCAAACATT
GTCTCACCAACTTCCATGGCATGAGTCTCACCAGGGACAAGTTATGCTCAATGGTAAAAA
AGTGGCAAACATTGATCGAAGCATCATGTGATGTATCAACCACTGACGGATACAAGGTCC
GTATGTTCTGCATTGGATTCACTCACAGGAGAAGCAATCAGATCAAAAAAACATCTTACG
CCCAACACATGCAGGTGATTAACATCCGAGCCAAGATGATCGAAATCATGACACGAGAGG
TGAACCTCGGTAACCTTCGTGAGCTCGTGAACAAACTCATCCCTGACTCCATTGCTAAGG
ATATTGAGAAGGCTTGCCAAGGCATTTACCCTCTTCATGATGTTCATATAAGAAAGGTTA
AGGTGCTGAAGAAGCCAAAGCTTGACCTTGGTCGATTGATGGAGATGCATGGTGAAGGAA
GTGCCAAAACTGGCCAATCCAAGTCCGACACTGGATCCAAGGTGGAACGCTCTGGCGGTG
ACAGTTATGAACCACCAGTCCAAGATTCCGTTTAAATAATAAAATCGGAAAACAAGTTTA
TGAGTGTAGTTGGTTGTTGTTACGCGGTAGCTTACCAGTTGCTCAAAAGAGTTTGGTGAA
GTAGTGTAGACTGAATTATTCATTTATTGATATAATGTAGAAGTCTTGTTGTGTTACTAT
GTGTCGATAGATGTTATGCTCTTGCTGTTCTAAGTGAATTTTGGTTACATATATCCATCT
GTGGGTAGAATACGCTTGACATGCACTATTTTAAATGGTTAAAGACTAAACCCCTCAATA
AGTTTTATTCGAGTATTCCATGGGTTGAATAACGTATTGTTGCTATCAAATGATATACCG
CACATTGAATTGCACATCAATTGATTTGGGGTTTGGTCAACTTAAAGTGAGCGAAATTTG
ACGGTGTTTTTTAATGTTGGTCAATCTGGACGGGAGATGTCGCTAGTGGGTCAAAAAAAT

InterProScan

Hamap	Ribosomal_S1/3_euk (IPR027500) - T[5-270] 39.413
SMART	Ribosomal_S3Ae (IPR001593) - T[20-225] 3.1E-133
Pfam	Ribosomal_S3Ae (IPR001593) - T[20-225] 9.1E-96

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RS3A_HUMAN	74.06 %	395	1.7E-140