Aniseed - Transcript Card

Transcript 'Boschl.CG.Botznik201...' >
Transcript 'KH2012:KH.C2.643.v1....'

Transcript Model

Transcript Id

KH2012:KH.C2.643.v1.A.nonSL4-1

Possible name(s)

ADRM1

Gene model

KH2012:KH.C2.643

Location

KhC2 [6,871,923 / 6,875,467]

Sequences

Amino acid sequence

Length: 365

>KH.C2.643.v1.A.nonSL4-1
FVRCFICYTTMSLFGNSARSSSKNLVEFRAGKMHLKGTTVSPDKRKGLVYVYQAEDSLMH
FCWKDRTSGRVEDDLIIFPDDCELKKVAQCTTGRVFLLTFKSTSRKLFFWMQEPKTDKDE
EFCKKVNDSLNNPPQPGQSSGSGADLGGMDGNIQDLLNNMDQQQLLQLMAGGGLGNLLSP
GRSTSRSSRNQTTSSPRSTTTVTPQRSTVADTIPAPAATTTTTTTTASQPGVQLSQLQDI
LSQMGAPKPEPKHINLADAITPAAMIPILADPKVQERLKPFLPEGQEFTSTEQELRETVR
SPQLRQAISYFGSALAAGDLAPVLAQFGLPEAAQLAASKGDVEAFAKAMQESEKKPEEEE
HMSVD

Nucleotide sequence

Length: 1,242

>KH2012:KH.C2.643.v1.A.nonSL4-1
ACTTGATATAATGTTTAAACGTTACGTCGTTTAGGTTTCTATTTGTTTTAGGTTTCTATT
CTATTTGGTTAGAATATTTTTAATTGATTCGTACGCTGTTTTATCTGCTATACAACAATG
TCTTTATTCGGAAACTCTGCAAGAAGTTCCAGCAAAAACTTGGTCGAGTTTCGTGCCGGG
AAAATGCATTTAAAGGGAACCACAGTATCACCAGACAAGAGAAAGGGTCTTGTTTACGTT
TACCAAGCCGAAGACAGCTTAATGCATTTCTGCTGGAAGGATCGAACAAGTGGAAGAGTT
GAAGATGATCTTATTATTTTTCCAGATGATTGTGAGCTGAAGAAAGTTGCCCAGTGCACA
ACAGGAAGAGTCTTCCTGCTCACTTTCAAGTCAACAAGCCGGAAATTGTTTTTTTGGATG
CAGGAACCCAAGACAGACAAGGATGAAGAGTTTTGTAAGAAAGTGAACGATTCTTTGAAC
AATCCTCCCCAACCAGGACAAAGTTCAGGCTCTGGTGCAGATCTTGGGGGAATGGATGGC
AACATACAGGATTTGTTGAACAACATGGACCAACAGCAGTTGCTTCAACTTATGGCAGGT
GGAGGGCTTGGTAATTTACTCAGTCCAGGTCGTTCCACTTCCCGGAGTTCACGAAATCAA
ACAACTTCTTCACCACGTTCCACAACAACTGTCACACCTCAGCGTTCCACCGTAGCTGAT
ACAATCCCTGCTCCAGCTGCAACAACAACAACAACAACTACTACAGCATCACAGCCTGGT
GTTCAGTTGAGTCAACTGCAAGATATTTTATCCCAAATGGGAGCTCCAAAGCCGGAGCCA
AAACATATTAACTTAGCAGATGCTATCACCCCTGCTGCAATGATTCCTATACTTGCTGAT
CCAAAGGTCCAAGAGCGATTGAAACCGTTTCTCCCAGAAGGTCAAGAATTCACATCAACT
GAGCAGGAGTTGCGAGAAACGGTTCGTTCTCCTCAGTTGCGACAAGCCATCTCCTACTTT
GGATCGGCTCTTGCAGCCGGTGATCTTGCCCCTGTACTTGCTCAGTTTGGACTTCCAGAG
GCAGCACAGTTGGCAGCAAGCAAAGGAGATGTAGAAGCTTTCGCAAAAGCCATGCAAGAA
TCCGAGAAGAAGCCAGAAGAGGAAGAACACATGTCAGTCGATTAAATGATCTTTTCATTG
CAATGTGACTACAATGAATAAACTGCATTAACAAAACAGGAA

InterProScan

PANTHER	Rpn13/ADRM1 (IPR006773) - T[18-354] 4.2E-111
Gene3D	Rpn13/ADRM1_sf (IPR038633) - T[24-132] 2.3E-47
Pfam	Rpn13/ADRM1 (IPR006773) - T[31-113] 4.4E-32
Gene3D	RPN13_C_sf (IPR038108) - T[234-355] 8.3E-37
Pfam	RPN13_C (IPR032368) - T[238-349] 1.2E-32

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
ADRM1_HUMAN	65.244 %	231	1.03E-72