- Clone 'csef007l03' >
- Transcript 'KH2012:KH.C2.573.v3....'
Transcript Model
Transcript Id
KH2012:KH.C2.573.v3.A.SL1-2
Possible name(s)
SMAD1; SMAD5; SMAD9
Gene model
Location
KhC2 [3,201,112 / 3,212,869]
Amino acid sequence
Length: 493
>KH.C2.573.v3.A.SL1-2
CSGCCVEKLFFVWWDIMAMTSLFGFTSPAVKRLLGWKQGDEEEKWAEKAVDSLVKKLKKK
KGSMEELERALSCPGQPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELK
PLEICSYPFDAKQKDVCINPYHYKRVESPVLPPVLVPRHSEFVPSHSMIHGNGGGHNHNH
NHMPPNANYPQNNSYNRPVPQLNHPTIPNQGPSSPYGGSQSTDVYSPNSFQPPQSPDGSV
SGPNSPYSIPADTPPPAYMPPEGDKVVPGSEAMETNRTMISPNNRGIEVPVAYSEPNHWC
TIVYYELNNRVGEAFPATSTSIIVDGFTNPSSTSNRFCLGQLSNVNRNSTIENTRRHISK
GVHLYYVGGEVYAECLSDSSIFVQSRNCNYHHGFHPTTVCKIPPSCSLKIFNNQEFAALL
SQSVNHGYEAVFELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEIHLNGPLQWLDKVLT
QMGSPNNAISSVS
Nucleotide sequence
Length: 2,371
>KH2012:KH.C2.573.v3.A.SL1-2
GTTGTTCAGGTTGTTGTGTGGAGAAGTTGTTTTTTGTATGGTGGGATATTATGGCGATGA
CAAGTTTATTTGGTTTTACAAGTCCAGCTGTAAAAAGACTGCTTGGCTGGAAACAAGGTG
ACGAGGAAGAAAAATGGGCTGAGAAAGCCGTTGACTCACTTGTGAAGAAGCTAAAGAAGA
AAAAAGGATCCATGGAGGAGCTAGAGCGAGCACTTAGTTGTCCTGGACAACCAAGTAAAT
GTGTCACCATCCCTCGATCGTTAGATGGCAGACTACAGGTCTCCCATAGAAAAGGTTTGC
CGCATGTAATCTACTGTCGAGTGTGGAGATGGCCGGATTTACAAAGTCATCATGAGTTAA
AACCTTTGGAAATCTGCTCCTACCCATTTGATGCAAAGCAGAAAGATGTCTGCATCAATC
CTTACCATTATAAACGTGTGGAAAGCCCAGTCCTTCCTCCAGTGTTGGTTCCACGCCATA
GTGAGTTTGTTCCATCACACAGCATGATACACGGCAACGGAGGTGGACACAACCATAACC
ACAACCATATGCCACCCAATGCCAACTACCCGCAGAATAATTCATACAACAGACCTGTAC
CGCAATTAAACCATCCAACAATACCAAACCAGGGACCAAGTTCACCCTACGGTGGTTCTC
AATCTACTGACGTTTACTCTCCGAACTCGTTCCAACCCCCACAGTCACCTGACGGTTCAG
TTAGTGGTCCCAACTCTCCATACAGTATACCTGCAGACACCCCACCCCCGGCCTACATGC
CACCGGAGGGGGATAAGGTAGTGCCCGGATCTGAGGCAATGGAGACCAACAGAACAATGA
TATCACCAAACAACAGAGGCATAGAAGTACCAGTCGCATACAGTGAACCAAATCATTGGT
GCACCATCGTTTACTACGAGTTAAACAATAGAGTGGGTGAAGCATTCCCTGCCACATCTA
CTTCTATAATAGTGGATGGTTTCACCAACCCATCTAGTACTTCAAACAGATTCTGCTTGG
GTCAGTTATCGAATGTAAACCGGAACTCGACCATCGAAAATACGAGACGCCACATCAGTA
AAGGCGTTCATCTGTATTACGTGGGAGGTGAGGTATATGCAGAATGCTTGTCTGATTCGT
CAATTTTCGTCCAATCACGTAACTGCAACTACCACCACGGTTTCCACCCAACCACTGTAT
GCAAGATACCACCATCATGCTCGCTCAAGATATTTAACAATCAGGAATTCGCCGCCCTGC
TCTCCCAATCGGTGAACCACGGATACGAGGCTGTGTTCGAACTCACCAAGATGTGCACGA
TCCGAATGAGCTTCGTCAAGGGTTGGGGTGCGGAATACCACAGACAGGACGTTACATCCA
CACCGTGCTGGATCGAAATTCACCTCAATGGCCCCCTCCAGTGGCTGGACAAAGTGCTTA
CCCAGATGGGGTCGCCAAACAACGCGATATCATCCGTCTCCTGAAACCTGGTTTACCACA
GCCTTTATTGGAGCGCTTGACAACTGCCGGCAGTTACCATGTTGCCAAACGTATTTCTTA
CCCAATGTAGTATTACTAACTGGTAGCTTTAAAGTTCAGTGCGAGTTTACAGGTTAAGTA
TTAAACATATGAAGAAATATTGACATTATAACACCGTTTTATGCCCAAGTCTTAAGATCG
TGTTCGTTTCAAACTACTCGCCAACTTTTATAAACCTTCTATCGTGCCAACACCTATTTC
TGTACGAAAATCCCAAGCCGTTTTTACCCTCTTCTGTTGAAAGTATTTTAGTATTTTCCT
GCGTTAGTATTCCTTGTTATTGTGGAAGAATTTGCCACATACCCCTGTGACGTAACTGCA
ACTGATCTTGGCTAACTTTTAAAGCAATCGGCGTTAAACTGAAACATTGCAACTGATTTT
GACACGCCGATCCTCTGGTGCTTCGCGATTACTTTAGTTAAATATAACGTTAAATAATTG
CGCGTGGTCATGTCAGTTTTTGACCAATGGAAGTCTGTAAAAAGTTACTCTCTGTTATTA
CTTCCGTTACATTGTGCTCATTTTTGTGTATTACTTGCGCCACAATGTAACTGCCAAATC
GAATCTGACTCGTTTCTCTTTCTAAGTTTTTGTAGTAAGAACAATCTGCTCCTGCGTCAA
AGCATACGTCACGAAGAACATTTTCGCGGACGCAACAACTCGATAGTTGCCGAATAATTA
CGACGCACCTATTAAGCGTAATTAACGCTACGGCTTGTGCGTCTTCGCAGTTACCAAATA
TGGCAGTTTGCGTGAGTTTTTGCAGGTCTGTTAATAATTATTTAGTAACTCCTATTAGAA
ATAAAGAATAAAGAAAACTTTCCCAGAAAAT
| PANTHER |
Dwarfin (IPR013790) - T[17-493] 6.9E-256 |
| Gene3D |
SMAD_MH1_sf (IPR036578) - T[19-160] 4.1E-65 |
| ProSiteProfiles |
MAD_homology_MH1 (IPR013019) - T[28-152] 37.598 |
| SUPERFAMILY |
SMAD_MH1_sf (IPR036578) - T[29-147] 2.22E-45 |
| SMART |
MAD_homology1_Dwarfin-type (IPR003619) - T[41-150] 1.5E-67 |
| Pfam |
MAD_homology1_Dwarfin-type (IPR003619) - T[47-147] 8.1E-42 |
| SUPERFAMILY |
SMAD_FHA_dom_sf (IPR008984) - T[283-484] 5.03E-91 |
| Gene3D |
SMAD-like_dom_sf (IPR017855) - T[290-493] 2.7E-93 |
| SMART |
SMAD_dom_Dwarfin-type (IPR001132) - T[297-469] 5.4E-103 |
| Pfam |
SMAD_dom_Dwarfin-type (IPR001132) - T[298-469] 3.6E-74 |
| ProSiteProfiles |
SMAD_dom_Dwarfin-type (IPR001132) - T[299-493] 73.567 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SMAD5_HUMAN | 73.499 % | 692 | 0 |
| SMAD1_HUMAN | 75.26 % | 698 | 0 |
| SMAD9_HUMAN | 70.588 % | 651 | 0 |