- Transcript 'KH2012:KH.C2.175.v1....' >
- Transcript 'KH2012:KH.C2.573.v1....' >
- Transcript 'KH2012:KH.L149.21.v1...' >
- Transcript 'KH2012:KH.C2.573.v2....'
Transcript Model
Transcript Id
KH2012:KH.C2.573.v2.R.SL1-1
Possible name(s)
SMAD1; SMAD5; SMAD9
Gene model
Location
KhC2 [3,201,112 / 3,203,015]
Amino acid sequence
Length: 161
>KH.C2.573.v2.R.SL1-1
CSGCCVEKLFFVWWDIMAMTSLFGFTSPAVKRLLGWKQGDEEEKWAEKAVDSLVKKLKKK
KGSMEELERALSCPGQPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELK
PLEICSYPFDAKQKDVCINPYHYKRVESPGLLKSGTENSHF
Nucleotide sequence
Length: 674
>KH2012:KH.C2.573.v2.R.SL1-1
GTTGTTCAGGTTGTTGTGTGGAGAAGTTGTTTTTTGTATGGTGGGATATTATGGCGATGA
CAAGTTTATTTGGTTTTACAAGTCCAGCTGTAAAAAGACTGCTTGGCTGGAAACAAGGTG
ACGAGGAAGAAAAATGGGCTGAGAAAGCCGTTGACTCACTTGTGAAGAAGCTAAAGAAGA
AAAAAGGATCCATGGAGGAGCTAGAGCGAGCACTTAGTTGTCCTGGACAACCAAGTAAAT
GTGTCACCATCCCTCGATCGTTAGATGGCAGACTACAGGTCTCCCATAGAAAAGGTTTGC
CGCATGTAATCTACTGTCGAGTGTGGAGATGGCCGGATTTACAAAGTCATCATGAGTTAA
AACCTTTGGAAATCTGCTCCTACCCATTTGATGCAAAGCAGAAAGATGTCTGCATCAATC
CTTACCATTATAAACGTGTGGAAAGCCCAGGTTTGTTAAAAAGTGGAACTGAAAATAGTC
ATTTTTAAACCTTGTAAACTAGCTTTTTAAACTTTCACTGTGAGGTTTAGTGTCAGTTTT
AAATTAGTTGAATCTATATTTCTAAATATAGACCCACAGGCAACTGTCACATTCGAGTTG
GCCAAACACTGTATTATTGCTGGCAATTACTGATCGTTATTATTAAAAATGTCAAGTTAA
AATGAGTTAACAAG
| PANTHER |
Dwarfin (IPR013790) - T[18-151] 3.4E-92 |
| Gene3D |
SMAD_MH1_sf (IPR036578) - T[19-156] 1.7E-62 |
| ProSiteProfiles |
MAD_homology_MH1 (IPR013019) - T[28-152] 36.771 |
| SUPERFAMILY |
SMAD_MH1_sf (IPR036578) - T[29-147] 1.57E-46 |
| SMART |
MAD_homology1_Dwarfin-type (IPR003619) - T[41-150] 1.3E-67 |
| Pfam |
MAD_homology1_Dwarfin-type (IPR003619) - T[47-147] 7.0E-43 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SMAD5_HUMAN | 88.235 % | 243 | 8.12E-80 |
| SMAD1_HUMAN | 89.63 % | 244 | 3.61E-80 |
| SMAD9_HUMAN | 89.474 % | 241 | 3.75E-79 |