- Transcript 'KH2012:KH.C2.175.v1....' >
- Transcript 'KH2012:KH.C2.573.v1....'
Transcript Model
Transcript Id
KH2012:KH.C2.573.v1.R.SL1-2
Possible name(s)
SMAD1; SMAD5; SMAD9
Gene model
Location
KhC2 [3,201,112 / 3,212,869]
Amino acid sequence
Length: 287
>KH.C2.573.v1.R.SL1-2
FIQQGPSSPYGGSQSTDVYSPNSFQPPQSPDGSVSGPNSPYSIPADTPPPAYMPPEGDKV
VPGSEAMETNRTMISPNNRGIEVPVAYSEPNHWCTIVYYELNNRVGEAFPATSTSIIVDG
FTNPSSTSNRFCLGQLSNVNRNSTIENTRRHISKGVHLYYVGGEVYAECLSDSSIFVQSR
NCNYHHGFHPTTVCKIPPSCSLKIFNNQEFAALLSQSVNHGYEAVFELTKMCTIRMSFVK
GWGAEYHRQDVTSTPCWIEIHLNGPLQWLDKVLTQMGSPNNAISSVS
Nucleotide sequence
Length: 2,331
>KH2012:KH.C2.573.v1.R.SL1-2
GTTGTTCAGGTTGTTGTGTGGAGAAGTTGTTTTTTGTATGGTGGGATATTATGGCGATGA
CAAGTTTATTTGGTTTTACAAGTCCAGCTGTAAAAAGACTGCTTGGCTGGAAACAAGGTG
ACGAGGAAGAAAAATGGGCTGAGAAAGCCGTTGACTCACTTGTGAAGAAGCTAAAGAAGA
AAAAAGGATCCATGGAGGAGCTAGAGCGAGCACTTAGTTGTCCTGGACAACCAAGTAAAT
GTGTCACCATCCCTCGATCGTTAGATGGCAGACTACAGGTCTCCCATAGAAAAGGTTTGC
CGCATGTAATCTACTGTCGAGTGTGGAGATGGCCGGATTTACAAAGTCATCATGAGTTAA
AACCTTTGGAAATCTGCTCCTACCCATTTGATGCAAAGCAGAAAGATGTCTGCATCAATC
CTTACCATTATAAACGTGTGGAAAGCCCAGTCCTTCCTCCAGTGTTGGTTCCACGCCATA
GTGAGTTTGTTCCATCACACAGCATGATACACGGCAACGGAGGTGGACACAACCATAACC
ACAACCATATGCCACCCAATGCCAACTACCCGCAGAATAATTCATACAACAGGGACCAAG
TTCACCCTACGGTGGTTCTCAATCTACTGACGTTTACTCTCCGAACTCGTTCCAACCCCC
ACAGTCACCTGACGGTTCAGTTAGTGGTCCCAACTCTCCATACAGTATACCTGCAGACAC
CCCACCCCCGGCCTACATGCCACCGGAGGGGGATAAGGTAGTGCCCGGATCTGAGGCAAT
GGAGACCAACAGAACAATGATATCACCAAACAACAGAGGCATAGAAGTACCAGTCGCATA
CAGTGAACCAAATCATTGGTGCACCATCGTTTACTACGAGTTAAACAATAGAGTGGGTGA
AGCATTCCCTGCCACATCTACTTCTATAATAGTGGATGGTTTCACCAACCCATCTAGTAC
TTCAAACAGATTCTGCTTGGGTCAGTTATCGAATGTAAACCGGAACTCGACCATCGAAAA
TACGAGACGCCACATCAGTAAAGGCGTTCATCTGTATTACGTGGGAGGTGAGGTATATGC
AGAATGCTTGTCTGATTCGTCAATTTTCGTCCAATCACGTAACTGCAACTACCACCACGG
TTTCCACCCAACCACTGTATGCAAGATACCACCATCATGCTCGCTCAAGATATTTAACAA
TCAGGAATTCGCCGCCCTGCTCTCCCAATCGGTGAACCACGGATACGAGGCTGTGTTCGA
ACTCACCAAGATGTGCACGATCCGAATGAGCTTCGTCAAGGGTTGGGGTGCGGAATACCA
CAGACAGGACGTTACATCCACACCGTGCTGGATCGAAATTCACCTCAATGGCCCCCTCCA
GTGGCTGGACAAAGTGCTTACCCAGATGGGGTCGCCAAACAACGCGATATCATCCGTCTC
CTGAAACCTGGTTTACCACAGCCTTTATTGGAGCGCTTGACAACTGCCGGCAGTTACCAT
GTTGCCAAACGTATTTCTTACCCAATGTAGTATTACTAACTGGTAGCTTTAAAGTTCAGT
GCGAGTTTACAGGTTAAGTATTAAACATATGAAGAAATATTGACATTATAACACCGTTTT
ATGCCCAAGTCTTAAGATCGTGTTCGTTTCAAACTACTCGCCAACTTTTATAAACCTTCT
ATCGTGCCAACACCTATTTCTGTACGAAAATCCCAAGCCGTTTTTACCCTCTTCTGTTGA
AAGTATTTTAGTATTTTCCTGCGTTAGTATTCCTTGTTATTGTGGAAGAATTTGCCACAT
ACCCCTGTGACGTAACTGCAACTGATCTTGGCTAACTTTTAAAGCAATCGGCGTTAAACT
GAAACATTGCAACTGATTTTGACACGCCGATCCTCTGGTGCTTCGCGATTACTTTAGTTA
AATATAACGTTAAATAATTGCGCGTGGTCATGTCAGTTTTTGACCAATGGAAGTCTGTAA
AAAGTTACTCTCTGTTATTACTTCCGTTACATTGTGCTCATTTTTGTGTATTACTTGCGC
CACAATGTAACTGCCAAATCGAATCTGACTCGTTTCTCTTTCTAAGTTTTTGTAGTAAGA
ACAATCTGCTCCTGCGTCAAAGCATACGTCACGAAGAACATTTTCGCGGACGCAACAACT
CGATAGTTGCCGAATAATTACGACGCACCTATTAAGCGTAATTAACGCTACGGCTTGTGC
GTCTTCGCAGTTACCAAATATGGCAGTTTGCGTGAGTTTTTGCAGGTCTGTTAATAATTA
TTTAGTAACTCCTATTAGAAATAAAGAATAAAGAAAACTTTCCCAGAAAAT
| PANTHER |
Dwarfin (IPR013790) - T[18-287] 1.2E-147 |
| SUPERFAMILY |
SMAD_FHA_dom_sf (IPR008984) - T[77-278] 1.06E-91 |
| Gene3D |
SMAD-like_dom_sf (IPR017855) - T[84-287] 6.3E-94 |
| SMART |
SMAD_dom_Dwarfin-type (IPR001132) - T[91-263] 5.4E-103 |
| Pfam |
SMAD_dom_Dwarfin-type (IPR001132) - T[92-263] 9.7E-75 |
| ProSiteProfiles |
SMAD_dom_Dwarfin-type (IPR001132) - T[93-287] 73.567 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SMAD5_HUMAN | 78.195 % | 427 | 5.25E-150 |
| SMAD1_HUMAN | 75.261 % | 429 | 1.18E-150 |
| SMAD9_HUMAN | 71.004 % | 388 | 2.38E-134 |