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  1. Transcript 'KH2012:KH.C2.573.v1....'

Transcript Model

Transcript Id

KH2012:KH.C2.573.v1.R.SL1-2

Possible name(s)

SMAD1; SMAD5; SMAD9

Location

KhC2 [3,201,112 / 3,212,869]

Sequences

Amino acid sequence

Length: 287

>KH.C2.573.v1.R.SL1-2
FIQQGPSSPYGGSQSTDVYSPNSFQPPQSPDGSVSGPNSPYSIPADTPPPAYMPPEGDKV
VPGSEAMETNRTMISPNNRGIEVPVAYSEPNHWCTIVYYELNNRVGEAFPATSTSIIVDG
FTNPSSTSNRFCLGQLSNVNRNSTIENTRRHISKGVHLYYVGGEVYAECLSDSSIFVQSR
NCNYHHGFHPTTVCKIPPSCSLKIFNNQEFAALLSQSVNHGYEAVFELTKMCTIRMSFVK
GWGAEYHRQDVTSTPCWIEIHLNGPLQWLDKVLTQMGSPNNAISSVS

Nucleotide sequence

Length: 2,331

>KH2012:KH.C2.573.v1.R.SL1-2
GTTGTTCAGGTTGTTGTGTGGAGAAGTTGTTTTTTGTATGGTGGGATATTATGGCGATGA
CAAGTTTATTTGGTTTTACAAGTCCAGCTGTAAAAAGACTGCTTGGCTGGAAACAAGGTG
ACGAGGAAGAAAAATGGGCTGAGAAAGCCGTTGACTCACTTGTGAAGAAGCTAAAGAAGA
AAAAAGGATCCATGGAGGAGCTAGAGCGAGCACTTAGTTGTCCTGGACAACCAAGTAAAT
GTGTCACCATCCCTCGATCGTTAGATGGCAGACTACAGGTCTCCCATAGAAAAGGTTTGC
CGCATGTAATCTACTGTCGAGTGTGGAGATGGCCGGATTTACAAAGTCATCATGAGTTAA
AACCTTTGGAAATCTGCTCCTACCCATTTGATGCAAAGCAGAAAGATGTCTGCATCAATC
CTTACCATTATAAACGTGTGGAAAGCCCAGTCCTTCCTCCAGTGTTGGTTCCACGCCATA
GTGAGTTTGTTCCATCACACAGCATGATACACGGCAACGGAGGTGGACACAACCATAACC
ACAACCATATGCCACCCAATGCCAACTACCCGCAGAATAATTCATACAACAGGGACCAAG
TTCACCCTACGGTGGTTCTCAATCTACTGACGTTTACTCTCCGAACTCGTTCCAACCCCC
ACAGTCACCTGACGGTTCAGTTAGTGGTCCCAACTCTCCATACAGTATACCTGCAGACAC
CCCACCCCCGGCCTACATGCCACCGGAGGGGGATAAGGTAGTGCCCGGATCTGAGGCAAT
GGAGACCAACAGAACAATGATATCACCAAACAACAGAGGCATAGAAGTACCAGTCGCATA
CAGTGAACCAAATCATTGGTGCACCATCGTTTACTACGAGTTAAACAATAGAGTGGGTGA
AGCATTCCCTGCCACATCTACTTCTATAATAGTGGATGGTTTCACCAACCCATCTAGTAC
TTCAAACAGATTCTGCTTGGGTCAGTTATCGAATGTAAACCGGAACTCGACCATCGAAAA
TACGAGACGCCACATCAGTAAAGGCGTTCATCTGTATTACGTGGGAGGTGAGGTATATGC
AGAATGCTTGTCTGATTCGTCAATTTTCGTCCAATCACGTAACTGCAACTACCACCACGG
TTTCCACCCAACCACTGTATGCAAGATACCACCATCATGCTCGCTCAAGATATTTAACAA
TCAGGAATTCGCCGCCCTGCTCTCCCAATCGGTGAACCACGGATACGAGGCTGTGTTCGA
ACTCACCAAGATGTGCACGATCCGAATGAGCTTCGTCAAGGGTTGGGGTGCGGAATACCA
CAGACAGGACGTTACATCCACACCGTGCTGGATCGAAATTCACCTCAATGGCCCCCTCCA
GTGGCTGGACAAAGTGCTTACCCAGATGGGGTCGCCAAACAACGCGATATCATCCGTCTC
CTGAAACCTGGTTTACCACAGCCTTTATTGGAGCGCTTGACAACTGCCGGCAGTTACCAT
GTTGCCAAACGTATTTCTTACCCAATGTAGTATTACTAACTGGTAGCTTTAAAGTTCAGT
GCGAGTTTACAGGTTAAGTATTAAACATATGAAGAAATATTGACATTATAACACCGTTTT
ATGCCCAAGTCTTAAGATCGTGTTCGTTTCAAACTACTCGCCAACTTTTATAAACCTTCT
ATCGTGCCAACACCTATTTCTGTACGAAAATCCCAAGCCGTTTTTACCCTCTTCTGTTGA
AAGTATTTTAGTATTTTCCTGCGTTAGTATTCCTTGTTATTGTGGAAGAATTTGCCACAT
ACCCCTGTGACGTAACTGCAACTGATCTTGGCTAACTTTTAAAGCAATCGGCGTTAAACT
GAAACATTGCAACTGATTTTGACACGCCGATCCTCTGGTGCTTCGCGATTACTTTAGTTA
AATATAACGTTAAATAATTGCGCGTGGTCATGTCAGTTTTTGACCAATGGAAGTCTGTAA
AAAGTTACTCTCTGTTATTACTTCCGTTACATTGTGCTCATTTTTGTGTATTACTTGCGC
CACAATGTAACTGCCAAATCGAATCTGACTCGTTTCTCTTTCTAAGTTTTTGTAGTAAGA
ACAATCTGCTCCTGCGTCAAAGCATACGTCACGAAGAACATTTTCGCGGACGCAACAACT
CGATAGTTGCCGAATAATTACGACGCACCTATTAAGCGTAATTAACGCTACGGCTTGTGC
GTCTTCGCAGTTACCAAATATGGCAGTTTGCGTGAGTTTTTGCAGGTCTGTTAATAATTA
TTTAGTAACTCCTATTAGAAATAAAGAATAAAGAAAACTTTCCCAGAAAAT

InterProScan

PANTHER
Dwarfin (IPR013790) - T[18-287] 1.2E-147
SUPERFAMILY
SMAD_FHA_dom_sf (IPR008984) - T[77-278] 1.06E-91
Gene3D
SMAD-like_dom_sf (IPR017855) - T[84-287] 6.3E-94
SMART
SMAD_dom_Dwarfin-type (IPR001132) - T[91-263] 5.4E-103
Pfam
SMAD_dom_Dwarfin-type (IPR001132) - T[92-263] 9.7E-75
ProSiteProfiles
SMAD_dom_Dwarfin-type (IPR001132) - T[93-287] 73.567

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SMAD5_HUMAN 78.195 % 427 5.25E-150
SMAD1_HUMAN 75.261 % 429 1.18E-150
SMAD9_HUMAN 71.004 % 388 2.38E-134