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TRANSCRIPT CARD

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  1. Clone 'cicl093l11' > 
  2. Clone 'cima878019' > 
  3. Transcript 'KH2012:KH.C2.506.v4....'

Transcript Model

Transcript Id

KH2012:KH.C2.506.v4.A.SL5-1

Possible name(s)

DHCR7; LBR; TM7SF2

Gene model

KH2012:KH.C2.506

Location

KhC2 [6,650,513 / 6,654,636]

Sequences

Amino acid sequence

Length: 439

>KH.C2.506.v4.A.SL5-1
FYRRVDVWTFFGCLFVLFVCPILPLTFYASCTHHECSLVETAYSVWSGSLDFSLPAVSGF
AARTYFTWIAFQILLSALPDIVHLILPRYVGGIQPGAVTPSGRVNRYNINGLQAWLITHI
LWAANAFYFKLFSPSIVFNNMGAFLVLSNITGYCLATFCYIKGRLFPTHENDCKLSGHFL
YDYLMGVEFNPRIGCWFDFKLFFNGRPGIVAWSIINLSFASRQYETFGHVTDSMILLNFL
QAIYVIDFFWNETWYLKTMDICHDHFGFYLAWGDLAWLPIMYTLQGFYLAYHPVELGVIK
SSLILLLGLVGYVIFRSANSQKDKFRKKKNKCKIWGKSPEYIECSYTSSDGVRHQSTLLV
SGWWGVARHFNYTGDLLGSLAYCLCCGGDHILPYFYIIYMTILLVHRLYRDEHRCKCKYG
EYWTLYVQRVPWRLIPGLY

Nucleotide sequence

Length: 1,453

>KH2012:KH.C2.506.v4.A.SL5-1
TTTTACAGGCGTGTGGATGTTTGGACATTCTTTGGATGTCTTTTCGTTCTGTTCGTGTGC
CCAATTCTGCCGTTAACCTTTTATGCATCGTGTACCCACCACGAGTGTAGTCTGGTCGAA
ACAGCTTACTCTGTGTGGTCCGGATCATTGGATTTTTCTTTACCGGCCGTTTCTGGTTTT
GCCGCTCGGACATATTTTACCTGGATTGCATTTCAGATTCTTCTTTCTGCATTGCCCGAC
ATCGTACACTTGATTCTACCACGTTACGTTGGTGGTATTCAACCTGGCGCAGTTACACCA
AGTGGGAGGGTTAATAGATACAACATCAACGGTCTTCAGGCTTGGTTAATTACACACATA
CTATGGGCGGCCAATGCATTTTACTTCAAGCTTTTCTCGCCATCCATAGTCTTCAATAAC
ATGGGTGCTTTCTTGGTGCTTTCCAACATAACTGGATATTGTCTTGCTACGTTTTGTTAC
ATTAAAGGTCGGTTATTCCCCACTCATGAGAATGATTGCAAACTAAGCGGACATTTCTTG
TACGATTATTTAATGGGTGTTGAATTTAACCCAAGGATTGGGTGTTGGTTCGACTTTAAA
TTATTCTTTAACGGTCGGCCAGGCATTGTAGCTTGGTCAATCATCAATTTATCATTTGCT
TCGCGTCAATACGAGACCTTTGGTCACGTGACCGATTCCATGATTCTTTTGAATTTTCTT
CAAGCAATCTACGTCATTGACTTTTTCTGGAACGAAACTTGGTATTTGAAAACAATGGAT
ATTTGCCATGACCATTTCGGATTCTACCTGGCCTGGGGCGACCTCGCGTGGCTGCCTATT
ATGTATACTTTGCAGGGTTTTTACCTCGCATACCACCCGGTCGAACTCGGAGTTATAAAG
TCAAGCCTCATCTTATTGCTAGGGTTGGTCGGTTACGTCATATTTCGATCCGCTAACAGC
CAGAAGGATAAATTTCGAAAGAAGAAAAATAAATGCAAAATTTGGGGGAAATCTCCCGAA
TATATTGAGTGTTCTTATACGTCATCAGACGGGGTACGTCATCAAAGTACACTTCTAGTA
TCCGGTTGGTGGGGTGTAGCTCGTCACTTCAACTACACCGGAGATTTGTTAGGGTCACTT
GCTTACTGCTTATGTTGCGGGGGTGACCACATTCTGCCATATTTCTACATCATATACATG
ACCATACTGCTGGTACATAGGTTATATAGGGATGAACACAGGTGTAAATGCAAGTACGGG
GAGTATTGGACGCTCTATGTTCAACGTGTGCCTTGGAGACTTATACCTGGCCTGTATTAA
ACGATGGTGCTATACCAGAGTTGATTTGAACATGCTATATTGGGACTGTGTTATTGAATT
GAAATATTTATACCCACGTTTCTGTATTGGCTGTCTCTTCTTGTCAACTGTGATTAAAAT
TACGAAGAATGTC

InterProScan

Pfam
Ergosterol_biosynth_ERG4_ERG24 (IPR001171) - T[82-439] 2.6E-98
ProSitePatterns
Sterol_reductase_CS (IPR018083) - T[403-426] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DHCR7_HUMAN 59.276 % 535 0
ERG24_HUMAN 41.888 % 263 6.41E-84
LBR_HUMAN 38.073 % 278 2.09E-87