- Clone 'cima879561' >
- Transcript 'Boleac.CG.SB_v3.S52....' >
- Clone 'cies009m08' >
- Transcript 'Phfumi.CG.MTP2014.S9...' >
- Transcript 'KH2012:KH.C2.469.v1....'
Transcript Model
Transcript Id
KH2012:KH.C2.469.v1.A.SL1-1
Possible name(s)
SFRP1; SFRP2; SFRP5
Gene model
Location
KhC2 [5,468,395 / 5,471,691]
Amino acid sequence
Length: 307
>KH.C2.469.v1.A.SL1-1
VNPLLPLLLRPTFKMKNLQLVILYTIFAFVISTGSGKRKQQKRPKIRRPLIFPQPAQPPD
SKCEIIPEHFGLCYGMEYPRMRLPNLLGHATMTEVLQQSRFWPPLVSKGCNPETRKFLCS
LFAPVCMKGIDRSIPPCRGLCEAVRDNCSRTMRNFGYPWPEILNCTQFPQQGQMCIEEDR
SGLPTPPPKVCQPCRRRRALQYLKTKFCSFDFVMKVRVKNLSYGYDETRMVIKPKHTIRW
DKSLRGTRKNDLWMRDGFHCRCSVINNIKKSYLVTGWKTANKLVVHSILKWNKKSKRVVK
RLKRAKC
Nucleotide sequence
Length: 1,378
>KH2012:KH.C2.469.v1.A.SL1-1
GTGCCGAACATAAGTGAATCCGCTGCTGCCTTTGCTTTTAAGACCAACGTTTAAAATGAA
GAACTTGCAGCTTGTGATTTTGTACACGATTTTCGCGTTTGTGATATCTACTGGCAGCGG
CAAACGGAAGCAGCAAAAAAGACCAAAGATTCGTCGCCCTTTAATTTTTCCCCAGCCAGC
ACAACCTCCAGATTCAAAGTGCGAAATTATCCCCGAACACTTCGGCCTTTGCTATGGAAT
GGAATACCCCAGAATGCGACTCCCAAACCTGCTTGGTCACGCCACTATGACCGAAGTGTT
GCAACAATCGAGGTTCTGGCCACCGCTAGTGTCGAAAGGCTGCAACCCAGAGACGCGCAA
GTTTCTTTGCTCATTGTTTGCTCCTGTGTGCATGAAAGGAATCGACAGGTCCATTCCACC
TTGTCGTGGTCTGTGTGAAGCTGTGCGCGATAATTGCTCACGCACAATGAGGAACTTCGG
TTACCCGTGGCCAGAAATCCTCAACTGCACGCAGTTTCCACAACAAGGCCAAATGTGTAT
TGAAGAAGACAGGTCCGGCCTACCAACACCCCCGCCAAAGGTTTGCCAACCGTGCCGACG
GAGACGGGCCCTGCAATATCTGAAGACCAAGTTTTGCTCGTTCGATTTCGTGATGAAGGT
GCGCGTTAAAAACTTGTCCTACGGTTACGATGAAACTCGGATGGTTATCAAGCCAAAGCA
CACGATTCGTTGGGATAAATCACTCCGTGGTACACGAAAAAACGATCTATGGATGCGAGA
CGGATTCCATTGCCGATGTTCAGTGATCAACAATATCAAAAAATCTTATCTCGTGACCGG
CTGGAAAACCGCAAACAAACTAGTTGTTCATTCAATTTTAAAGTGGAACAAAAAAAGCAA
ACGGGTTGTAAAAAGGCTCAAACGAGCAAAATGCTGAACGCGTTAACGTTTGGTTAAAAA
TCTGCAAGACAAAAGGGAGAGTCGGACTCCACCGATCGCTGCCCAGTGTGATATTGTTTT
TAAATATGGTTTATCATATTGCCTGTTTCATATGCTTTACTATTACTTTGCTTTTTCTTG
TACCTCCATTCTTCAAATATTTTATGTCAAAATTTCGTTACATTTATCTCGTCCTATATA
ACCCTGGCTCCAGCAGGTACTAAAGCTTAAACAGGACGAAGTATTACTGCTGTTTTTAAC
GATAAATCCAATATGTTTACCATCAAACCAGAGCTCGTACTCTGCACAAAACAAATACTT
CTGTCATTTTTCAGAATGTTACCTTCTAAGGGATTTAAAGTAAGAAATCGGTACTTTTAT
TTAAACGGTGTGTACAAAATTTGATTGGCTTGTGGGTTGTGAATACAATTCTTTGTAG
| Gene3D |
Frizzled_dom_sf (IPR036790) - T[56-182] 1.5E-36 |
| ProSiteProfiles |
Frizzled_dom (IPR020067) - T[58-178] 23.94 |
| PANTHER |
Frizzled/SFRP (IPR015526) - T[60-305] 5.4E-70 |
| PANTHER |
SFRP2 (IPR026558) - T[60-305] 5.4E-70 |
| SUPERFAMILY |
Frizzled_dom_sf (IPR036790) - T[61-176] 4.19E-38 |
| SMART |
Frizzled_dom (IPR020067) - T[62-180] 2.2E-45 |
| Pfam |
Frizzled_dom (IPR020067) - T[63-171] 2.8E-25 |
| SUPERFAMILY |
TIMP-like_OB-fold (IPR008993) - T[185-307] 3.77E-13 |
| ProSiteProfiles |
Netrin_domain (IPR001134) - T[191-307] 14.888 |
| Pfam |
Netrin_module_non-TIMP (IPR018933) - T[206-303] 2.0E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SFRP2_HUMAN | 41.502 % | 215 | 1.11E-68 |
| SFRP5_HUMAN | 39.6 % | 179 | 2.39E-54 |
| SFRP1_HUMAN | 35.714 % | 151 | 1.27E-43 |