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  1. Transcript 'KH2012:KH.L121.1.v1....' > 
  2. Transcript 'Cisavi.CG.ENS81.R489...' > 
  3. Transcript 'KH2012:KH.C2.36.v4.A...' > 
  4. Transcript 'KH2012:KH.C3.195.v1....' > 
  5. Transcript 'KH2012:KH.C2.348.v3....'

Transcript Model

Transcript Id

KH2012:KH.C2.348.v3.A.SL7-3

Possible name(s)

NCOA7; OXR1; TLDC2

Gene model

KH2012:KH.C2.348

Location

KhC2 [5,982,682 / 5,995,420]

Sequences

Amino acid sequence

Length: 378

>KH.C2.348.v3.A.SL7-3
LSVGRVWCCKNMFSTCSSHNGNRKSSQPAGTIQYNVGNRDTLRSIAVNFNTTPSAIMKLN
KLTSSYIFPEQVLFVPETNILKPTVEQVSQNSGTNFDGDFSFLAPLSASPGQLDFSKPKK
FQDLLVVSTQEDIKDANSNSKLLRDMGADTNKPEVTTETPVSPTITRGISQTSDTSVEGK
QPRTRMFSTESEPFEENFIKMTVRYITSTQETVEGVLLVTPTSIMFDPDANDPLAILHGC
EKFGIMCNLSLITSVSMFCDKGCSSTSKIPEPPKPKDENNTPPHDGQLVDISSDSTPTIT
PTLPTNQEAQKSPTGQSETSDKEEKVTTRAEVKLKEEFPFLHSVVKSVEEFFPDEETNQS
GLGSPAQIMLKSVATSSE

Nucleotide sequence

Length: 1,697

>KH2012:KH.C2.348.v3.A.SL7-3
GCGTGAAAAATAATACATATAAGAAAGTCATAATTAAGCGTAGGTCGTGTTTGGTGCTGT
AAAAACATGTTTTCGACCTGTAGCAGCCATAATGGAAACAGAAAATCATCTCAACCTGCA
GGGACCATTCAATACAACGTTGGGAACAGAGACACTTTAAGAAGCATTGCGGTTAACTTT
AACACTACCCCTTCAGCGATTATGAAGTTAAACAAACTAACGTCAAGTTACATTTTCCCT
GAACAAGTTTTATTTGTCCCGGAGACGAATATTTTGAAACCAACAGTAGAACAAGTGTCC
CAAAACTCGGGAACAAATTTTGACGGAGATTTTTCCTTCCTGGCTCCTTTGTCTGCATCA
CCTGGTCAACTTGACTTCTCAAAACCAAAGAAGTTCCAGGATTTGCTGGTAGTTTCCACA
CAAGAGGATATTAAAGATGCAAACAGTAATTCAAAACTGCTAAGAGACATGGGAGCAGAC
ACCAACAAACCAGAGGTTACAACAGAGACTCCAGTAAGCCCCACTATAACAAGAGGTATC
TCCCAAACATCGGACACAAGTGTGGAAGGTAAACAACCTCGTACACGAATGTTTTCAACC
GAGTCCGAACCATTTGAGGAAAACTTTATAAAGATGACTGTACGATATATTACCTCTACT
CAGGAAACTGTTGAAGGTGTTCTTCTCGTCACACCGACCTCAATAATGTTCGATCCTGAT
GCAAACGATCCACTTGCTATTCTACATGGGTGCGAAAAGTTTGGAATCATGTGTAACTTG
TCTCTAATTACAAGTGTTTCCATGTTCTGTGATAAAGGATGCAGTAGTACAAGCAAAATC
CCGGAACCTCCGAAACCAAAAGACGAAAACAACACCCCACCACACGATGGCCAACTTGTG
GATATCTCGTCAGATTCAACGCCCACGATCACGCCCACTTTACCGACCAATCAGGAGGCT
CAAAAATCCCCAACCGGCCAATCAGAGACCTCGGATAAAGAAGAAAAGGTCACGACACGA
GCAGAGGTTAAATTGAAAGAAGAATTCCCGTTTCTTCACTCGGTTGTCAAGTCTGTTGAA
GAATTTTTCCCCGATGAAGAAACGAACCAATCAGGTCTCGGATCCCCGGCACAGATCATG
TTGAAATCGGTAGCGACATCTAGCGAGTAACTGAACGTAACCTGAAAATCATTGTTCTGC
CACCAAATATTTTGGCTTTTACCGGATAACGATATCAAATTTAGTTTGTGGGTTTAATGT
TACAAACTATACAACGTTTTTATAATGATAACTTTTTATGAAACGTATAATTAAATTAAG
ACGTATTTCAACCTATTTTTGCACATCTAATACAAACGTAACATTAATTATTTTTTTGTC
ATGGAATATGTACCCGGGAAATTCCCTAAAGTGCGAATCTTGGTTGTTTTATTGTTTGTT
CATAATCGACTTTTGGTCAAACACACCGGGTGTACCTTGTCTGTTGTTCGCTCTGTGACG
TCACTGTCGCGATTGTTGCTCCTGTGTTACGAAAACATGGTTCGATTATGCCGCGTGTGC
AACTTCATGTAGCAACTGACGTCATATTGGATTGCTTTTCAACCAAACAACATCGTTTGT
GACGTACATAACATAACATACATTTTATTTATCTTTTGAAAACAGCGGCGATCATATTAT
TAAAACAACGAAAAGAA

InterProScan

Gene3D
LysM_dom_sf (IPR036779) - T[17-83] 2.0E-12
ProSiteProfiles
LysM_dom (IPR018392) - T[32-75] 10.646
CDD
LysM_dom (IPR018392) - T[32-75] 5.44939E-7
SMART
LysM_dom (IPR018392) - T[33-76] 4.0E-7
Pfam
LysM_dom (IPR018392) - T[34-76] 1.4E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
OXR1_HUMAN 53.521 % 87 1.53E-18
NCOA7_HUMAN 33.333 % 117 1.88E-28