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  1. Transcript 'Boschl.CG.Botznik201...' > 
  2. Transcript 'KH2012:KH.C2.348.v3....'

Transcript Model

Transcript Id

KH2012:KH.C2.348.v3.A.SL10-3

Possible name(s)

NCOA7; OXR1; TLDC2

Gene model

KH2012:KH.C2.348

Location

KhC2 [5,982,682 / 5,995,377]

Sequences

Amino acid sequence

Length: 374

>KH.C2.348.v3.A.SL10-3
RVWCCKNMFSTCSSHNGNRKSSQPAGTIQYNVGNRDTLRSIAVNFNTTPSAIMKLNKLTS
SYIFPEQVLFVPETNILKPTVEQVSQNSGTNFDGDFSFLAPLSASPGQLDFSKPKKFQDL
LVVSTQEDIKDANSNSKLLRDMGADTNKPEVTTETPVSPTITRGISQTSDTSVEGKQPRT
RMFSTESEPFEENFIKMTVRYITSTQETVEGVLLVTPTSIMFDPDANDPLAILHGCEKFG
IMCNLSLITSVSMFCDKGCSSTSKIPEPPKPKDENNTPPHDGQLVDISSDSTPTITPTLP
TNQEAQKSPTGQSETSDKEEKVTTRAEVKLKEEFPFLHSVVKSVEEFFPDEETNQSGLGS
PAQIMLKSVATSSE

Nucleotide sequence

Length: 1,654

>KH2012:KH.C2.348.v3.A.SL10-3
GTCGTGTTTGGTGCTGTAAAAACATGTTTTCGACCTGTAGCAGCCATAATGGAAACAGAA
AATCATCTCAACCTGCAGGGACCATTCAATACAACGTTGGGAACAGAGACACTTTAAGAA
GCATTGCGGTTAACTTTAACACTACCCCTTCAGCGATTATGAAGTTAAACAAACTAACGT
CAAGTTACATTTTCCCTGAACAAGTTTTATTTGTCCCGGAGACGAATATTTTGAAACCAA
CAGTAGAACAAGTGTCCCAAAACTCGGGAACAAATTTTGACGGAGATTTTTCCTTCCTGG
CTCCTTTGTCTGCATCACCTGGTCAACTTGACTTCTCAAAACCAAAGAAGTTCCAGGATT
TGCTGGTAGTTTCCACACAAGAGGATATTAAAGATGCAAACAGTAATTCAAAACTGCTAA
GAGACATGGGAGCAGACACCAACAAACCAGAGGTTACAACAGAGACTCCAGTAAGCCCCA
CTATAACAAGAGGTATCTCCCAAACATCGGACACAAGTGTGGAAGGTAAACAACCTCGTA
CACGAATGTTTTCAACCGAGTCCGAACCATTTGAGGAAAACTTTATAAAGATGACTGTAC
GATATATTACCTCTACTCAGGAAACTGTTGAAGGTGTTCTTCTCGTCACACCGACCTCAA
TAATGTTCGATCCTGATGCAAACGATCCACTTGCTATTCTACATGGGTGCGAAAAGTTTG
GAATCATGTGTAACTTGTCTCTAATTACAAGTGTTTCCATGTTCTGTGATAAAGGATGCA
GTAGTACAAGCAAAATCCCGGAACCTCCGAAACCAAAAGACGAAAACAACACCCCACCAC
ACGATGGCCAACTTGTGGATATCTCGTCAGATTCAACGCCCACGATCACGCCCACTTTAC
CGACCAATCAGGAGGCTCAAAAATCCCCAACCGGCCAATCAGAGACCTCGGATAAAGAAG
AAAAGGTCACGACACGAGCAGAGGTTAAATTGAAAGAAGAATTCCCGTTTCTTCACTCGG
TTGTCAAGTCTGTTGAAGAATTTTTCCCCGATGAAGAAACGAACCAATCAGGTCTCGGAT
CCCCGGCACAGATCATGTTGAAATCGGTAGCGACATCTAGCGAGTAACTGAACGTAACCT
GAAAATCATTGTTCTGCCACCAAATATTTTGGCTTTTACCGGATAACGATATCAAATTTA
GTTTGTGGGTTTAATGTTACAAACTATACAACGTTTTTATAATGATAACTTTTTATGAAA
CGTATAATTAAATTAAGACGTATTTCAACCTATTTTTGCACATCTAATACAAACGTAACA
TTAATTATTTTTTTGTCATGGAATATGTACCCGGGAAATTCCCTAAAGTGCGAATCTTGG
TTGTTTTATTGTTTGTTCATAATCGACTTTTGGTCAAACACACCGGGTGTACCTTGTCTG
TTGTTCGCTCTGTGACGTCACTGTCGCGATTGTTGCTCCTGTGTTACGAAAACATGGTTC
GATTATGCCGCGTGTGCAACTTCATGTAGCAACTGACGTCATATTGGATTGCTTTTCAAC
CAAACAACATCGTTTGTGACGTACATAACATAACATACATTTTATTTATCTTTTGAAAAC
AGCGGCGATCATATTATTAAAACAACGAAAAGAA

InterProScan

Gene3D
LysM_dom_sf (IPR036779) - T[13-79] 2.0E-12
CDD
LysM_dom (IPR018392) - T[28-71] 5.39125E-7
ProSiteProfiles
LysM_dom (IPR018392) - T[28-71] 10.646
SMART
LysM_dom (IPR018392) - T[29-72] 4.0E-7
Pfam
LysM_dom (IPR018392) - T[30-72] 1.4E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
OXR1_HUMAN 53.521 % 87.4 1.4E-18
NCOA7_HUMAN 33.333 % 117 1.72E-28