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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S6...' > 
  2. Transcript 'Moocci.CG.ELv1_2.S33...' > 
  3. Transcript 'KH2012:KH.C2.348.v6....' > 
  4. Transcript 'Phfumi.CG.MTP2014.S6...' > 
  5. Transcript 'KH2012:KH.C2.348.v3....'

Transcript Model

Transcript Id

KH2012:KH.C2.348.v3.A.nonSL9-3

Possible name(s)

NCOA7; OXR1; TLDC2

Gene model

KH2012:KH.C2.348

Location

KhC2 [5,982,682 / 5,995,434]

Sequences

Amino acid sequence

Length: 378

>KH.C2.348.v3.A.nonSL9-3
LSVGRVWCCKNMFSTCSSHNGNRKSSQPAGTIQYNVGNRDTLRSIAVNFNTTPSAIMKLN
KLTSSYIFPEQVLFVPETNILKPTVEQVSQNSGTNFDGDFSFLAPLSASPGQLDFSKPKK
FQDLLVVSTQEDIKDANSNSKLLRDMGADTNKPEVTTETPVSPTITRGISQTSDTSVEGK
QPRTRMFSTESEPFEENFIKMTVRYITSTQETVEGVLLVTPTSIMFDPDANDPLAILHGC
EKFGIMCNLSLITSVSMFCDKGCSSTSKIPEPPKPKDENNTPPHDGQLVDISSDSTPTIT
PTLPTNQEAQKSPTGQSETSDKEEKVTTRAEVKLKEEFPFLHSVVKSVEEFFPDEETNQS
GLGSPAQIMLKSVATSSE

Nucleotide sequence

Length: 1,711

>KH2012:KH.C2.348.v3.A.nonSL9-3
ATACTGATTTTAAGGCGTGAAAAATAATACATATAAGAAAGTCATAATTAAGCGTAGGTC
GTGTTTGGTGCTGTAAAAACATGTTTTCGACCTGTAGCAGCCATAATGGAAACAGAAAAT
CATCTCAACCTGCAGGGACCATTCAATACAACGTTGGGAACAGAGACACTTTAAGAAGCA
TTGCGGTTAACTTTAACACTACCCCTTCAGCGATTATGAAGTTAAACAAACTAACGTCAA
GTTACATTTTCCCTGAACAAGTTTTATTTGTCCCGGAGACGAATATTTTGAAACCAACAG
TAGAACAAGTGTCCCAAAACTCGGGAACAAATTTTGACGGAGATTTTTCCTTCCTGGCTC
CTTTGTCTGCATCACCTGGTCAACTTGACTTCTCAAAACCAAAGAAGTTCCAGGATTTGC
TGGTAGTTTCCACACAAGAGGATATTAAAGATGCAAACAGTAATTCAAAACTGCTAAGAG
ACATGGGAGCAGACACCAACAAACCAGAGGTTACAACAGAGACTCCAGTAAGCCCCACTA
TAACAAGAGGTATCTCCCAAACATCGGACACAAGTGTGGAAGGTAAACAACCTCGTACAC
GAATGTTTTCAACCGAGTCCGAACCATTTGAGGAAAACTTTATAAAGATGACTGTACGAT
ATATTACCTCTACTCAGGAAACTGTTGAAGGTGTTCTTCTCGTCACACCGACCTCAATAA
TGTTCGATCCTGATGCAAACGATCCACTTGCTATTCTACATGGGTGCGAAAAGTTTGGAA
TCATGTGTAACTTGTCTCTAATTACAAGTGTTTCCATGTTCTGTGATAAAGGATGCAGTA
GTACAAGCAAAATCCCGGAACCTCCGAAACCAAAAGACGAAAACAACACCCCACCACACG
ATGGCCAACTTGTGGATATCTCGTCAGATTCAACGCCCACGATCACGCCCACTTTACCGA
CCAATCAGGAGGCTCAAAAATCCCCAACCGGCCAATCAGAGACCTCGGATAAAGAAGAAA
AGGTCACGACACGAGCAGAGGTTAAATTGAAAGAAGAATTCCCGTTTCTTCACTCGGTTG
TCAAGTCTGTTGAAGAATTTTTCCCCGATGAAGAAACGAACCAATCAGGTCTCGGATCCC
CGGCACAGATCATGTTGAAATCGGTAGCGACATCTAGCGAGTAACTGAACGTAACCTGAA
AATCATTGTTCTGCCACCAAATATTTTGGCTTTTACCGGATAACGATATCAAATTTAGTT
TGTGGGTTTAATGTTACAAACTATACAACGTTTTTATAATGATAACTTTTTATGAAACGT
ATAATTAAATTAAGACGTATTTCAACCTATTTTTGCACATCTAATACAAACGTAACATTA
ATTATTTTTTTGTCATGGAATATGTACCCGGGAAATTCCCTAAAGTGCGAATCTTGGTTG
TTTTATTGTTTGTTCATAATCGACTTTTGGTCAAACACACCGGGTGTACCTTGTCTGTTG
TTCGCTCTGTGACGTCACTGTCGCGATTGTTGCTCCTGTGTTACGAAAACATGGTTCGAT
TATGCCGCGTGTGCAACTTCATGTAGCAACTGACGTCATATTGGATTGCTTTTCAACCAA
ACAACATCGTTTGTGACGTACATAACATAACATACATTTTATTTATCTTTTGAAAACAGC
GGCGATCATATTATTAAAACAACGAAAAGAA

InterProScan

Gene3D
LysM_dom_sf (IPR036779) - T[17-83] 2.0E-12
ProSiteProfiles
LysM_dom (IPR018392) - T[32-75] 10.646
CDD
LysM_dom (IPR018392) - T[32-75] 5.44939E-7
SMART
LysM_dom (IPR018392) - T[33-76] 4.0E-7
Pfam
LysM_dom (IPR018392) - T[34-76] 1.4E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
OXR1_HUMAN 53.521 % 87 1.53E-18
NCOA7_HUMAN 33.333 % 117 1.88E-28