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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C11.648.v1...'
  2. Transcript 'KH2012:KH.C2.348.v1....'

Transcript Model

Transcript Id

KH2012:KH.C2.348.v1.A.SL6-2

Possible name(s)

NCOA7; OXR1; TLDC2

Location

KhC2 [5,985,975 / 5,995,382]

Sequences

Amino acid sequence

Length: 278

>KH.C2.348.v1.A.SL6-2
VGRVWCCKNMFSTCSSHNGNRKSSQPAGTIQYNVGNRDTLRSIAVNFNTTPSAIMKLNKL
TSSYIFPEQVLFVPETNILKPTVEQVSQNSGTNFDGDFSFLAPLSASPGQLDFSKPKKFQ
DLLVVSTQEDIKDANSNSKLLRDMGADTNKPEVTTETPVSPTITRGISQTSDTSVEGKQP
RTRMFSTESEPFEENFIKMTVRYITSTQETVEGVLLVTPTSIMFDPDANDPLAILHGCEK
FGIMCNLSLITSVSMFCDKGCSSTRKLLKVFFLSHRPQ

Nucleotide sequence

Length: 908

>KH2012:KH.C2.348.v1.A.SL6-2
CGTAGGTCGTGTTTGGTGCTGTAAAAACATGTTTTCGACCTGTAGCAGCCATAATGGAAA
CAGAAAATCATCTCAACCTGCAGGGACCATTCAATACAACGTTGGGAACAGAGACACTTT
AAGAAGCATTGCGGTTAACTTTAACACTACCCCTTCAGCGATTATGAAGTTAAACAAACT
AACGTCAAGTTACATTTTCCCTGAACAAGTTTTATTTGTCCCGGAGACGAATATTTTGAA
ACCAACAGTAGAACAAGTGTCCCAAAACTCGGGAACAAATTTTGACGGAGATTTTTCCTT
CCTGGCTCCTTTGTCTGCATCACCTGGTCAACTTGACTTCTCAAAACCAAAGAAGTTCCA
GGATTTGCTGGTAGTTTCCACACAAGAGGATATTAAAGATGCAAACAGTAATTCAAAACT
GCTAAGAGACATGGGAGCAGACACCAACAAACCAGAGGTTACAACAGAGACTCCAGTAAG
CCCCACTATAACAAGAGGTATCTCCCAAACATCGGACACAAGTGTGGAAGGTAAACAACC
TCGTACACGAATGTTTTCAACCGAGTCCGAACCATTTGAGGAAAACTTTATAAAGATGAC
TGTACGATATATTACCTCTACTCAGGAAACTGTTGAAGGTGTTCTTCTCGTCACACCGAC
CTCAATAATGTTCGATCCTGATGCAAACGATCCACTTGCTATTCTACATGGGTGCGAAAA
GTTTGGAATCATGTGTAACTTGTCTCTAATTACAAGTGTTTCCATGTTCTGTGATAAAGG
ATGCAGTAGTACAAGGAAACTGTTGAAGGTGTTCTTCTTGTCACACCGACCTCAATAATG
TTCGATCCTGATGCAAACGATCCACTTGCTATTCTACATGGGTGCGAAAAGTTTGGAATC
ATGTGTAA

InterProScan

Gene3D
LysM_dom_sf (IPR036779) - T[15-81] 1.2E-12
CDD
LysM_dom (IPR018392) - T[30-73] 3.92464E-7
ProSiteProfiles
LysM_dom (IPR018392) - T[30-73] 10.646
SMART
LysM_dom (IPR018392) - T[31-74] 4.0E-7
Pfam
LysM_dom (IPR018392) - T[32-74] 9.0E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
OXR1_HUMAN 53.521 % 87 3.47E-19
NCOA7_HUMAN 33.333 % 116 2.99E-29