- Transcript 'KH2012:KH.C2.336.v1....'
Transcript Model
Transcript Id
KH2012:KH.C2.336.v1.A.SL2-1
Possible name(s)
BMP5; BMP6; BMP7
Gene model
Location
KhC2 [5,221,495 / 5,226,232]
Amino acid sequence
Length: 667
>KH.C2.336.v1.A.SL2-1
TGTYFSVMTCHRNKAHLRSELEPTGYDCQSVCSCKIGHKWSMRIASKDMRRHSDIDTMDL
SKTSSRDCCELIYRKKLKLRRRRFELPTAPQFYIYSTLLLILFISVISSDAYVIEHEGPT
QSHLYRRLAGKERREYQRQILSLLGLNHRPRPANQSYQVRTSAPLYMLGLYNSASGGVAE
RPIGHTQAEIDPTRNQLEGATDLGGGVGFDRYSLNRRTMPNGVFRGGVSTTLNRYLEEGR
IFNEVGIFEENSDQSRQPQSFHATGGPYNSLATNQVEKRLLDDSDLVMSFVNTKQPRGVD
DETFSSRELRRILIRHRSFYFEMRHVGENERLSAAKFRLYKERSEYGTSNQTLRVNVYQA
MPDARGRPTVYLLGTRLVGTSEEGWLVYDVTSAVRDWIITGTNVGLKVTVETLDGSYLKP
QKVGVVGRKGEAAKQAFLVAFFAQGEDSQREQITRRFRRSPPDAEEAEEDEEEDDWEDES
APGDSENTHTNDTNNQTWRAPGSAASEVVYDRGTRSDITSNTVPGNDDAPERERTMWRRK
ARRRKKKNRSKKKKTPSRRKKSEPCHRKIFNVRFKDIGWEDWLIAPQHYAAYRCSGACAF
PLNHHTNATNHAIIQSMVSTMIRTASVPMPCCTPTELLSLDFLYFDENENVMYRRFKDMV
VVSCGCN
Nucleotide sequence
Length: 2,577
>KH2012:KH.C2.336.v1.A.SL2-1
ACAGTTCGTTTTTCAGGTTGCAATCACTTGAAATACTAAGCACATACTGAATGTTAAGAG
TTTGGTGAAGAACAAAACCTGGAAAATCTGAACACCAGCACCTGACAGCGTTATCTGCTC
GAACAACTCAACCGAACAAGAGATCCATCAGCAGCTATAACTGTGGCACACATTCGTTCC
GTGTGAACCTCGTTCGGATGGAAGAGAGCCGTTATCTCTGCTCATGCTCAAAGATTGAGC
TCAACACGACATAGAAGGAATTAGTTTGGCGTAAACAAGCGTCTGTTTTCACTTGGGAAA
GTGAACAGGGACCTACTTTTCCGTGATGACTTGTCATCGCAATAAAGCGCACCTGCGCAG
TGAACTGGAACCTACTGGTTACGATTGCCAGTCAGTATGCAGCTGTAAGATCGGACACAA
GTGGAGCATGCGGATCGCAAGTAAGGACATGCGACGGCATTCAGATATTGACACTATGGA
TCTAAGTAAGACTTCAAGTCGAGATTGCTGTGAACTGATATACCGTAAAAAACTGAAGCT
TAGGCGACGGAGATTTGAACTGCCGACAGCGCCGCAATTTTATATATATTCTACTTTGCT
CTTGATTTTATTTATTAGCGTCATTTCTTCGGATGCGTACGTCATTGAACACGAGGGTCC
AACTCAATCACACCTTTACAGAAGACTTGCAGGTAAGGAGAGGCGGGAATATCAACGTCA
GATCTTATCTTTGCTGGGACTCAATCATCGTCCTCGACCCGCCAATCAAAGCTACCAAGT
TCGCACCTCTGCGCCACTGTACATGCTTGGTCTATACAACTCGGCGTCAGGCGGGGTTGC
TGAAAGACCGATAGGTCACACCCAAGCGGAAATCGATCCCACGAGAAACCAGTTGGAAGG
TGCAACGGACTTGGGCGGTGGCGTGGGATTCGATCGCTATTCGCTTAACCGAAGGACGAT
GCCAAATGGGGTTTTCAGGGGCGGAGTATCGACCACTTTAAACCGATACTTAGAGGAAGG
TAGGATTTTTAACGAAGTCGGAATTTTCGAAGAGAATTCGGACCAGAGTCGGCAACCACA
AAGTTTTCATGCGACAGGAGGGCCGTACAACAGCTTGGCTACGAACCAGGTTGAAAAGAG
GTTGTTGGACGACTCTGATCTCGTCATGAGTTTTGTGAACACAAAGCAACCGAGAGGTGT
CGATGATGAGACGTTCTCGTCCAGAGAGTTGCGGAGAATTTTGATTCGTCACCGATCTTT
TTATTTCGAGATGCGTCACGTGGGAGAGAACGAGCGACTCTCAGCGGCCAAATTCCGTCT
CTACAAAGAGAGAAGCGAGTATGGAACAAGCAACCAAACACTGAGAGTCAACGTGTACCA
AGCAATGCCGGATGCTCGGGGAAGACCAACTGTTTATCTGCTTGGCACCCGATTGGTTGG
GACTTCAGAGGAAGGATGGTTGGTTTATGACGTCACAAGCGCTGTACGCGACTGGATCAT
TACTGGAACTAACGTGGGCTTAAAAGTCACCGTTGAAACCCTAGACGGTTCTTACTTGAA
GCCGCAGAAAGTTGGAGTTGTGGGCAGGAAGGGAGAGGCTGCAAAACAAGCTTTTCTCGT
CGCCTTCTTCGCACAGGGAGAAGACTCTCAGCGTGAACAAATAACCAGGAGGTTCAGGAG
AAGTCCTCCGGATGCAGAAGAGGCGGAAGAAGACGAAGAGGAGGATGACTGGGAAGATGA
ATCAGCTCCGGGGGATTCAGAAAATACGCACACAAACGACACAAACAATCAAACCTGGAG
AGCCCCAGGTTCTGCTGCTTCGGAAGTTGTGTACGACAGGGGGACGCGTTCGGACATTAC
AAGCAACACTGTTCCCGGAAATGACGATGCACCGGAGAGAGAGAGAACGATGTGGAGAAG
AAAGGCGAGAAGACGAAAGAAAAAAAATCGTTCCAAGAAGAAAAAAACGCCATCCAGACG
AAAAAAATCCGAACCTTGCCATAGAAAAATATTCAATGTCCGTTTTAAAGATATTGGCTG
GGAGGACTGGTTGATTGCGCCACAACACTACGCGGCTTACAGGTGCTCAGGTGCTTGCGC
ATTCCCTCTTAATCACCACACGAACGCTACAAATCATGCCATTATTCAGTCGATGGTTAG
CACAATGATTAGGACAGCCTCAGTACCTATGCCATGTTGTACACCCACCGAACTACTTAG
TCTTGATTTTCTGTATTTTGACGAGAACGAGAATGTAATGTACCGAAGGTTCAAAGACAT
GGTTGTCGTGTCATGCGGGTGCAACTGATCATTCAACCAACACGAGTCAAATATATGATG
AAATTAGTTCCACCAGAAGACGCACCGGTTCCAGTGATCTTATTACAAGACCACACTTCA
ACCCAGCAATAACAATGCGCCGATGCCTGAAAGGAAATTTTGGTGACGTAAATTATGATT
GATTTAACGTCATTTAAAGGCAGATATGACCAGTGTACCTTTTCTTTCGTGCCTTCTCAT
TTACTGCTCGGCTGCTTTTACCCGTGTGAAGTTTTAATAAAAGGGCAGTATACACAA
| PANTHER |
TGF-beta-rel (IPR015615) - T[68-667] 9.3E-116 |
| Pfam |
TGF-b_propeptide (IPR001111) - T[119-441] 1.9E-63 |
| ProSiteProfiles |
TGF-b_C (IPR001839) - T[544-667] 37.92 |
| Gene3D |
Cystine-knot_cytokine (IPR029034) - T[550-667] 1.2E-36 |
| SUPERFAMILY |
Cystine-knot_cytokine (IPR029034) - T[558-666] 3.4E-34 |
| Pfam |
TGF-b_C (IPR001839) - T[564-666] 1.1E-30 |
| SMART |
TGF-b_C (IPR001839) - T[565-667] 4.3E-46 |
| ProSitePatterns |
TGFb_CS (IPR017948) - T[583-598] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| BMP5_HUMAN | 33.639 % | 150 | 3.71E-39 |
| BMP7_HUMAN | 42.647 % | 136 | 1.02E-34 |
| BMP6_HUMAN | 31.025 % | 150 | 5.81E-39 |