Aniseed - Transcript Card

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Transcript Model

Transcript Id

KH2012:KH.C2.317.v1.A.SL1-1

Possible name(s)

NENF; PGRMC1; PGRMC2

Gene model

KH2012:KH.C2.317

Location

KhC2 [5,623,713 / 5,627,533]

Sequences

Amino acid sequence

Length: 185

>KH.C2.317.v1.A.SL1-1
NKMDADESIGLLESIFKNPINIGLMMVCGYLLYKICKSNSTEDNFGPPPEPEMPKMKKRD
MSIEELREYDGVAHDGRILIAVNGKVFDVTRGKKFYGPDGPYGVFAGRDASRGLAQFRLD
KETIKDGYDDISDLNAMEMESVREWEMQFSEKYEFIGKLLKPGEEPTDYSDFSEAETDKE
KSKDD

Nucleotide sequence

Length: 1,544

>KH2012:KH.C2.317.v1.A.SL1-1
GTTCATTATTATATGTGGTAGTTCTAAGTTGTGTATGAAATAAAATGGATGCTGATGAAA
GCATAGGTTTACTTGAAAGTATTTTCAAGAATCCAATAAACATTGGATTAATGATGGTGT
GTGGATATTTGCTGTACAAGATTTGCAAATCTAACTCTACAGAAGATAACTTTGGTCCTC
CTCCTGAGCCAGAGATGCCAAAGATGAAGAAGAGGGACATGTCAATCGAAGAGTTAAGGG
AGTATGATGGGGTGGCACATGATGGGAGAATACTAATCGCTGTGAATGGGAAAGTGTTTG
ATGTTACGCGAGGAAAGAAATTTTATGGCCCAGATGGGCCATATGGTGTGTTTGCTGGCA
GAGATGCATCAAGAGGACTAGCTCAATTTCGTTTGGACAAGGAAACAATTAAAGATGGTT
ATGATGATATTTCTGATTTAAATGCAATGGAAATGGAAAGTGTCAGGGAATGGGAGATGC
AGTTTTCTGAAAAATATGAATTTATTGGGAAACTTCTAAAGCCAGGAGAAGAGCCGACTG
ATTATTCTGATTTTAGTGAAGCTGAAACTGACAAAGAGAAAAGCAAAGACGATTAAGATA
ATAAACTCATTTCATTTACCTTAACCTATAAGCCCCGCCGCTGTTTGGTAAACTGCTTGG
AGCTATTGTCATGTTTATTTGTAGTTTACAAAAGCGCTTCTACTGCTTAATATTCTAATG
TATTTCAAAGCATAATTACTCCATATTGGATGCCAGGACCTTCTCCACAGGTTAAGACTT
CCATCATCAGTGTTTTTGCTGCATACTTACATCAAAAGTAAAGTCCTGCATGATGATGCA
TCTTTGCTCCATACATTGTTTTAATTGCAAACTGTGATATAAAGATGGTTTAATTATTAA
TTTAAACAACTCAAAGTCCAACCACACTGCACAGCTGTTGATTGGCCATTACATCTGTGA
TTTATCTTCTGGCAATACTTAACCTAGAGTTTGTAAAAAGAGAAAGATTACCCAACTCAA
AGAAGTGAATTCTTGGGCTATGGATTAGCCAATTTTACAATTATTGTTGTTAATTTTAAA
CACTTTCTTTAAAACTTACTAAGGTTATTTTATTTTCCATTGGCAACAAAAAAATCTGCA
ATCGAAAATTTTTCAATTTGTAATACATATGAATTTCATCTTTTTTCAAAGTTTTAAACA
CCGTTTTACTCAGTTAATTGCTGCCATATTATTGTTTTGAAGCATTCTATTCCAAGGTCG
TTAATTGTAACTTTGTTTTTGTCCAATTCTCCTAAACCATGCCAAGTACAGTTACTTACT
CCTTTAAGCATTTTATGTGCTTGTAAATATAACGTCATTCTTTTTCCATTAGTAATGCAA
ACAATCCAATAGAATTGTTTTGTAAATATCTGTTCATTTTTGTGTAATTTTCACACTTCC
TGTTCGTACACCTTTGGATGTTAAAATTTGAACTTTTTCTTTATATTAAGCGTTTTATTA
AGTGGGTTAAAGTCATGTTATCTCTATTAAAATGTCAAATAATG

InterProScan

SUPERFAMILY	Cyt_B5-like_heme/steroid_sf (IPR036400) - T[52-160] 3.01E-26
Gene3D	Cyt_B5-like_heme/steroid_sf (IPR036400) - T[53-162] 3.6E-39
SMART	Cyt_B5-like_heme/steroid-bd (IPR001199) - T[61-160] 9.2E-21
Pfam	Cyt_B5-like_heme/steroid-bd (IPR001199) - T[63-135] 1.9E-13

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
PGRC1_HUMAN	55.191 %	182	6.32E-59
PGRC2_HUMAN	65.693 %	191	6.78E-62