- Region 'REG00000791' >
- Clone 'ma313h09' >
- Transcript 'Phfumi.CG.MTP2014.S3...' >
- Transcript 'KH2012:KH.C2.14.v2.A...' >
- Transcript 'KH2012:KH.C2.302.v3....'
Transcript Model
Transcript Id
KH2012:KH.C2.302.v3.B.SL2-1
Possible name(s)
TUB; TULP1; TULP3
Gene model
Location
KhC2 [4,742,968 / 4,754,850]
Amino acid sequence
Length: 516
>KH.C2.302.v3.B.SL2-1
PVCAVACRLSETVKFWIFRCPIHFLCCLVTTNHIMYAGLERKTATDRWSNQAPGSVIDNE
EEVSRQMSNMSFRSIRDKKIEQQKEREEQKQRRKKQDSIMMVATNQPRVGSGGKSRPSTA
SKRDESLPLVESLNTNNKYNPRAEAAYDNPSLEEDNHSTYSRATTITMDNSSESIPHRKT
GTELKMEKLGMGQSADFDVDSEEEETDSGMVAIGPRPQTAKSNSASKEDTDVRPGSSASK
YNIPGMDLDDLESFCMKPAPQGYTIKCRISRDNKGIDRHSYPTYYLHYERDDGKKIFILA
GRKRKRSKTSNYLISVDATDLSRDGESYIGKLRSNIMGTKFTVYDHGIKLGKPGINIDRD
NLREELVAVCYETNVLGFKGPRKMTVIIPGMNISHERVKFKPNHERETILSRWQNRNMEN
LIELSNKTPVWNEETQSYVLNFRGRVTQASVKNFQIVHQSDPEYIVMQFGRVEDNVFTVD
YNYPMNAVQAFAIALSSFDSKLACEYTHSKQPPFYA
Nucleotide sequence
Length: 2,293
>KH2012:KH.C2.302.v3.B.SL2-1
GCCAGTTTGTGCGGTAGCTTGTAGGTTAAGTGAAACTGTAAAATTTTGGATATTTCGCTG
TCCTATTCACTTTCTCTGCTGTTTGGTTACGACTAATCATATCATGTATGCTGGTCTTGA
AAGAAAAACTGCCACTGACCGTTGGTCTAACCAAGCTCCGGGAAGTGTGATTGACAATGA
AGAAGAAGTATCAAGGCAGATGTCCAACATGAGCTTCAGGAGCATAAGAGATAAAAAGAT
CGAACAACAGAAAGAGAGAGAGGAGCAGAAACAGAGGAGGAAAAAACAAGATTCAATCAT
GATGGTTGCCACCAACCAACCTCGAGTTGGTTCTGGTGGAAAATCTCGACCATCAACAGC
AAGCAAACGAGATGAGTCACTGCCATTGGTGGAGAGCCTTAACACCAACAACAAGTATAA
TCCAAGAGCAGAAGCTGCATATGATAACCCTAGCTTGGAAGAAGATAACCATTCAACTTA
TTCAAGAGCAACAACAATTACAATGGATAACTCATCGGAAAGTATTCCACATAGAAAAAC
CGGCACTGAATTAAAGATGGAAAAATTAGGGATGGGACAAAGTGCGGACTTTGATGTTGA
TTCTGAAGAGGAAGAAACAGATTCAGGAATGGTTGCGATAGGTCCTCGACCACAAACAGC
AAAATCGAATTCTGCATCAAAAGAGGACACTGACGTTCGACCTGGCAGCAGTGCATCGAA
ATACAACATCCCCGGTATGGACTTGGACGACTTAGAAAGCTTCTGTATGAAACCAGCACC
CCAGGGGTACACGATAAAATGCAGGATATCACGTGACAACAAGGGCATCGACCGACACTC
CTACCCAACATATTACCTTCATTATGAACGGGACGATGGAAAAAAGATTTTCATACTAGC
GGGCAGGAAGCGAAAACGAAGCAAAACTTCAAATTATTTGATTTCCGTTGACGCCACCGA
CTTATCTAGAGACGGGGAATCATATATTGGTAAATTACGCTCCAATATCATGGGAACCAA
ATTCACGGTGTACGACCACGGTATAAAGCTGGGGAAACCTGGAATCAACATCGACAGAGA
TAATCTACGGGAAGAACTTGTCGCCGTATGCTATGAGACCAACGTGTTAGGTTTCAAGGG
TCCGCGTAAGATGACGGTCATTATACCTGGGATGAACATTTCTCATGAGAGAGTCAAATT
CAAACCGAACCATGAAAGAGAGACTATATTATCAAGGTGGCAAAACCGAAACATGGAGAA
CCTGATCGAGCTTTCCAACAAGACCCCTGTTTGGAACGAAGAAACCCAATCTTACGTTCT
CAACTTCCGTGGTCGAGTTACACAAGCTTCAGTGAAAAACTTTCAAATAGTTCATCAGAG
CGATCCTGAATACATAGTGATGCAGTTCGGACGTGTCGAGGACAATGTATTCACCGTAGA
TTACAATTACCCAATGAATGCAGTGCAAGCATTTGCTATTGCTCTCTCCAGTTTCGACTC
AAAACTCGCCTGCGAATATACCCATTCGAAACAACCCCCTTTTTACGCCTAATGTCGCTA
TATCGCTTTAACCCGTTATTATATGTGCGAATTATCGNAATTAAGTTTGCACCGCTTCAA
ATTTCACAGTGCTAGGTGTTACCAGTCCCTTCCTTACACTTCATATACTTCGTGGAAACT
ACGCCGACGTATTCCGTTCTTTTTTTACTATCAGTATTTTCTTTTCAACCGGCAGCCACT
ATTTAATGTAACGCGCATCACTGTAAGCTTTAATTTTTTCCCTTTTTGTGAACTTTTTCG
AATTTTCTCAATCATCAGAACGCACGAAAAATAACTTGTGGCGTCACGCTACGGGTCCGC
GTGCCCCTCGTTGAGCAGACTTAACTTATTGCAACCAATTTTCGCTTCATAACCCACCGC
GCAATGAGCAACTGCTTCGCTGTTTGATTCTCGTCGTGTGCTAGATATTTTACCTTTGGA
TTTTTATCAGGCGGTCTGCGCGGCCTGCCTGTTATCTAGTTAAAATACATGTGTGCTATT
CAATTTATATCTAAGCGCCAAAAAGTTATTTCAACGGTTCTATTCAATTGCCGCAAAGTT
TTTTTTAGGTTTTGCTTTTCTTTCCTCGCTGTACGGCAAGCGACTATTTGACTTTTTCTG
GATTTCCTTATTTGCAATTTCGCAATGTATATTTTCCAGTAGCAATTGATGTTAGGTATC
AACTATATATGTTATCGTTGTAGTCTTATAGTATATTTTAAGTATTGTGTACATTAAACT
GTTCAAGGAACGC
| Gene3D |
Tubby-like_C (IPR025659) - T[243-505] 1.8E-119 |
| SUPERFAMILY |
Tubby-like_C (IPR025659) - T[246-505] 1.12E-106 |
| Pfam |
Tubby_C (IPR000007) - T[257-500] 2.0E-88 |
| PRINTS |
Tubby_C (IPR000007) - T[312-328] 7.0E-77 - T[328-352] 7.0E-77 - T[363-390] 7.0E-77 - T[424-441] 7.0E-77 - T[442-458] 7.0E-77 - T[462-481] 7.0E-77 - T[483-505] 7.0E-77 |
| ProSitePatterns |
Tubby_C_CS (IPR018066) - T[442-455] . - T[490-505] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TUB_HUMAN | 67.01 % | 424 | 1.47E-144 |
| TULP3_HUMAN | 49.195 % | 416 | 3.31E-142 |
| TULP1_HUMAN | 61.45 % | 362 | 7.18E-120 |