- Transcript 'KH2012:KH.C4.713.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C9.494.v4....' >
- Transcript 'KH2012:KH.C4.420.v1....' >
- Transcript 'KH2012:KH.C2.28.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.C2.28.v1.A.nonSL1-1
Possible name(s)
RPL10A; RSL1D1
Gene model
Location
KhC2 [7,440,270 / 7,443,249]
Amino acid sequence
Length: 196
>KH.C2.28.v1.A.nonSL1-1
KTKQRKFLESVELQISLKNYDPQKDKRFSGTVKLPNLPRNKFRICVLGDAQHCDEANANN
IACMNVESLKKLNKDKKLIKKLAKKYDAFLASESLIKQIPRLLGPGLNKAGKFPSLVTHQ
ESLASKIHDVKSTIKFQMKKVLCLAVAIGNVNMTEDELVQNLNLAINFLVSLLKKNWQNV
RSLYVKSTMGRPQRLY
Nucleotide sequence
Length: 626
>KH2012:KH.C2.28.v1.A.nonSL1-1
AAAACCAAACAGAGGAAGTTTCTTGAATCTGTGGAGCTTCAAATCTCCTTGAAGAACTAC
GATCCACAGAAGGACAAGCGTTTCTCTGGAACAGTCAAGTTGCCAAACTTGCCACGAAAT
AAGTTCCGCATCTGTGTGTTGGGAGATGCTCAACATTGTGATGAAGCAAACGCAAACAAC
ATCGCTTGCATGAATGTAGAGTCGTTGAAGAAGCTCAACAAGGATAAGAAACTCATCAAA
AAGCTCGCAAAGAAATATGATGCTTTCCTTGCTTCTGAATCGCTCATTAAACAAATTCCA
AGATTGCTTGGACCTGGTCTCAACAAAGCAGGAAAGTTTCCCTCCCTTGTGACACACCAG
GAATCTTTGGCATCGAAGATCCATGATGTGAAATCCACCATCAAGTTCCAGATGAAGAAA
GTTCTTTGTTTAGCTGTTGCCATCGGTAACGTGAACATGACGGAAGATGAACTTGTTCAA
AACTTGAATCTCGCCATTAACTTCTTGGTCTCCCTGCTAAAGAAGAACTGGCAAAACGTT
CGTTCCCTGTACGTGAAAAGCACAATGGGACGTCCACAACGCTTGTACTAATTGCAAGCA
ACAATAAATTTGCTGATTACTATTTT
| Pfam |
Ribosomal_L1/biogenesis (IPR028364) - T[1-190] 2.8E-46 |
| PIRSF |
Ribosomal_L1 (IPR002143) - T[1-196] 1.6E-51 |
| SUPERFAMILY |
Ribosomal_L1-like (IPR023674) - T[2-196] 1.31E-65 |
| CDD |
Ribosomal_L1/biogenesis (IPR028364) - T[3-195] 3.04429E-63 |
| Gene3D |
Ribosomal_L1_3-a/b-sand (IPR016095) - T[42-132] 6.5E-69 |
| ProSitePatterns |
Ribosomal_L1_CS (IPR023673) - T[96-115] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RL10A_HUMAN | 78.866 % | 293 | 2.05E-102 |