- Transcript 'KH2012:KH.C2.21.v5.A...'
Transcript Model
Transcript Id
KH2012:KH.C2.21.v5.A.SL4-1
Possible name(s)
CSMD1; MASP1; PAMR1
Gene model
Location
KhC2 [7,627,488 / 7,631,938]
Amino acid sequence
Length: 353
>KH.C2.21.v5.A.SL4-1
CFRLLNPVGGRVRLNMSSDVIITGTMALYSCIGDDVILIGNSTRVCLNTGGWSGYAPLCL
KGCGLFPMTSEILGTVPWHVTILRRNTVTNRWHPVCNGAFIGDNLIITSAQCVTYSFTNL
KYNVSSMVVGIGDVTRTVIRHKYHISRILIHHNYDPMLRHNDVALLVMTSSVPIDFSGEI
WPICLRASNKKRSKLLAARRRGLMSSWSPYMGCHVRNPSANGTRGCQDNHREVKVFNVTR
AKNIHCSGKLRMGGKYMCWHLPAQPTCPVAIGFGQPFFNRVGSNTDSNAETHPRGGGRES
YVWVLTGIGRAAENCNDRYDSNYIAFSKVDRYLSWIRQCMKVLRNEGELYRQT
Nucleotide sequence
Length: 2,309
>KH2012:KH.C2.21.v5.A.SL4-1
CTTGTTTCCGCTTACTCAACCCCGTTGGCGGGAGAGTTCGTTTGAATATGTCTAGTGACG
TCATAATCACTGGAACAATGGCGCTTTATTCGTGCATTGGGGATGACGTCATATTGATCG
GGAATTCTACTCGGGTTTGTTTAAACACTGGTGGTTGGTCGGGATATGCTCCACTATGTT
TAAAAGGATGCGGATTGTTTCCAATGACGTCAGAAATATTAGGGACTGTCCCGTGGCACG
TCACAATCTTGCGTCGAAACACTGTGACCAATCGTTGGCATCCTGTGTGTAATGGAGCAT
TTATCGGAGACAATCTAATTATTACAAGTGCACAGTGCGTCACTTACTCGTTCACGAATC
TGAAATACAATGTCAGCTCCATGGTTGTTGGTATCGGTGACGTAACAAGGACAGTCATAC
GTCATAAATATCACATTTCTCGGATTTTAATTCACCACAATTACGACCCCATGTTGCGTC
ATAATGACGTTGCATTGTTGGTGATGACGTCATCCGTTCCTATTGATTTTTCGGGAGAAA
TTTGGCCGATTTGTTTAAGGGCAAGCAACAAAAAGAGATCAAAACTTTTGGCCGCTAGAC
GTCGCGGTTTAATGAGTTCGTGGTCACCTTATATGGGCTGTCACGTGAGAAATCCTTCGG
CAAATGGAACAAGAGGTTGCCAAGATAACCATCGTGAGGTTAAAGTATTCAACGTAACTA
GAGCGAAGAATATTCACTGCAGTGGCAAGCTACGGATGGGCGGGAAATATATGTGTTGGC
ATTTACCTGCTCAACCTACCTGCCCTGTAGCAATTGGATTCGGTCAACCATTCTTTAACC
GGGTTGGGTCAAATACTGATTCAAATGCTGAAACACATCCGCGTGGTGGCGGTAGAGAGA
GCTACGTATGGGTGCTGACAGGCATCGGGCGTGCGGCAGAGAACTGCAATGACCGATATG
ATTCAAACTATATCGCATTCTCTAAAGTTGACAGGTATCTATCATGGATTCGCCAATGCA
TGAAAGTACTAAGAAACGAAGGTGAATTATATCGACAAACTTAGTTGTGTTTTCCCATGT
ACGCCTTCCCACGCTTTGTTTCTATAGCCCTGTTTTATAACGATTGGCGCACCGAACACA
CGTTATATTTTGACAAATATTTATTCGAGTAAAAGGTTATCAAATGTAATAAAGACTCGT
CATTTCCGCGTCGTATTATTGAAAAGCAGAACGTATATTGTTACAAAACGTTCTTTGTGT
GACGTCACAAAGACAACAATCGTCATTGTAATTTCGAAACATGGCAATCGGGAACTAAAA
GTAAAAATAGAGAAAGTAAAAAAGTAATACCAAAGTATGTGCGAATTTCACATTAAAACG
GCTTTTTCATAGTCTTTTTTCACAAGATTATGCACTGGTTTGGATTTCCCATGGTTAATT
CGTCTTTATTCAATACGTGTGCTTCTACCATACCGCCCGTGTGCTTAAATGAATCAGGTC
TGCATCCACCGCATTCAATCCTTCTTATTGCGTTTGAGTTTTCGTTGGTTATTCGCGCAG
AAGTCTGATATGATTTTAAAGGAGTTCCGCATCGATGACAGCAAAGTCTTTTGTTTTCAG
TGTGCAATTGTTTATATACTTTCGCCATTTTTTATGATTGAATAAACGTGTATATTTCTG
CAAATGCAAATAAGAGTAAACTATATAAAAATAAAATTATTCACTAGACTAAAAATAACG
CAGAAGAAAAAGTGTATTTTTGACAAATGCAAAATACAGTCATCATATAGGTCTGTGGAG
TAAGATGGGATATCGATAGCACATAATATCTCATATTTTATAGTTGTAACGCTATTTTAC
GACCGCGAGAATGCTGTTACGTAATTCTGTAAAATATTCTCTGATTTCTACGATATAAGA
CGATAAAAGAAAATATAAACCTGTCCCAACTTACCCCACCCTACCATCTATTGTAAACTT
AAAAAGCCTGCTCTGACTAAACTTATAACAAAACGTCAAATGACTGCCAATCATTTTACT
ACGCTCTGCTTTATGTTATATTGCATGTCTTAAGTCTTTACGCATGTCTTTAAATAGTTA
ATTACGTCCTCAAAACGATAACGCGAAATTTACAACTACGTGTAGAGTTGTAGACAGTCG
TAAGCCATTGTTATGCTACCTATAGTACGTGTTCTCTCGCTGCTGCGGGTCATCGGTTAA
TCCCATTGCTGACTTTACAAGACGAGCTGTTCTTCTAATTACTGGAACTAGGTTAATTTT
CCGAGAAGTTATAAGTTACATAAAATAAA
| SMART |
Sushi_SCR_CCP_dom (IPR000436) - T[1-59] 5.2E-4 |
| SUPERFAMILY |
Sushi/SCR/CCP_sf (IPR035976) - T[1-59] 8.7E-6 |
| ProSiteProfiles |
Sushi_SCR_CCP_dom (IPR000436) - T[1-61] 7.847 |
| CDD |
Sushi_SCR_CCP_dom (IPR000436) - T[13-59] 0.00228719 |
| SUPERFAMILY |
Peptidase_S1_PA (IPR009003) - T[38-259] 1.28E-25 - T[302-341] 1.28E-25 |
| ProSiteProfiles |
Trypsin_dom (IPR001254) - T[38-341] 14.952 |
| SMART |
Trypsin_dom (IPR001254) - T[71-336] 2.6E-5 |
| Pfam |
Trypsin_dom (IPR001254) - T[74-208] 3.9E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PAMR1_HUMAN | 32.597 % | 85.9 | 2.98E-18 |
