- Transcript 'KH2012:KH.C2.21.v3.B...'
Transcript Model
Transcript Id
KH2012:KH.C2.21.v3.B.ND2-1
Possible name(s)
CSMD1; MASP1; PAMR1
Gene model
Location
KhC2 [7,627,565 / 7,631,938]
Amino acid sequence
Length: 362
>KH.C2.21.v3.B.ND2-1
MALYSCIGDDVILIGNSTRVCLNTGGWSGYAPLCLKVCRDPGIPTYADKTIIYPDHVVED
GERHLVVGTRIKFSCMFPDLRIVGVKLRVCLEDGSWSGTRNPLCLPRAFIGDNLIITSAQ
CVTYSFTNLKYNVSSMVVGIGDVTRTVIRHKYHISRILIHHNYDPMLRHNDVALLVMTSS
VPIDFSGEIWPICLRASNKKRSKLLAARRRGLMSSWSPYMGCHVRNPSANGTRGCQDNHR
EVKVFNVTRAKNIHCSGKLRMGGKYMCWHLPAQPTCPVAIGFGQPFFNRVGSNTDSNAET
HPRGGGRESYVWVLTGIGRAAENCNDRYDSNYIAFSKVDRYLSWIRQCMKVLRNEGELYR
QT
Nucleotide sequence
Length: 2,334
>KH2012:KH.C2.21.v3.B.ND2-1
ATGGCGCTTTATTCGTGCATTGGGGATGACGTCATATTGATCGGGAATTCTACTCGGGTT
TGTTTAAACACTGGTGGTTGGTCGGGATATGCTCCACTATGTTTAAAAGTTTGTCGCGAC
CCTGGAATTCCGACCTACGCTGACAAAACAATCATATATCCTGATCACGTGGTAGAGGAT
GGCGAGCGACACTTAGTGGTAGGAACGCGGATTAAGTTTTCTTGCATGTTTCCTGACCTT
CGGATCGTTGGAGTAAAACTTAGAGTTTGTTTAGAAGACGGGAGCTGGAGCGGAACCCGG
AACCCTCTTTGTTTGCCAAGAGCATTTATCGGAGACAATCTAATTATTACAAGTGCACAG
TGCGTCACTTACTCGTTCACGAATCTGAAATACAATGTCAGCTCCATGGTTGTTGGTATC
GGTGACGTAACAAGGACAGTCATACGTCATAAATATCACATTTCTCGGATTTTAATTCAC
CACAATTACGACCCCATGTTGCGTCATAATGACGTTGCATTGTTGGTGATGACGTCATCC
GTTCCTATTGATTTTTCGGGAGAAATTTGGCCGATTTGTTTAAGGGCAAGCAACAAAAAG
AGATCAAAACTTTTGGCCGCTAGACGTCGCGGTTTAATGAGTTCGTGGTCACCTTATATG
GGCTGTCACGTGAGAAATCCTTCGGCAAATGGAACAAGAGGTTGCCAAGATAACCATCGT
GAGGTTAAAGTATTCAACGTAACTAGAGCGAAGAATATTCACTGCAGTGGCAAGCTACGG
ATGGGCGGGAAATATATGTGTTGGCATTTACCTGCTCAACCTACCTGCCCTGTAGCAATT
GGATTCGGTCAACCATTCTTTAACCGGGTTGGGTCAAATACTGATTCAAATGCTGAAACA
CATCCGCGTGGTGGCGGTAGAGAGAGCTACGTATGGGTGCTGACAGGCATCGGGCGTGCG
GCAGAGAACTGCAATGACCGATATGATTCAAACTATATCGCATTCTCTAAAGTTGACAGG
TATCTATCATGGATTCGCCAATGCATGAAAGTACTAAGAAACGAAGGTGAATTATATCGA
CAAACTTAGTTGTGTTTTCCCATGTACGCCTTCCCACGCTTTGTTTCTATAGCCCTGTTT
TATAACGATTGGCGCACCGAACACACGTTATATTTTGACAAATATTTATTCGAGTAAAAG
GTTATCAAATGTAATAAAGACTCGTCATTTCCGCGTCGTATTATTGAAAAGCAGAACGTA
TATTGTTACAAAACGTTCTTTGTGTGACGTCACAAAGACAACAATCGTCATTGTAATTTC
GAAACATGGCAATCGGGAACTAAAAGTAAAAATAGAGAAAGTAAAAAAGTAATACCAAAG
TATGTGCGAATTTCACATTAAAACGGCTTTTTCATAGTCTTTTTTCACAAGATTATGCAC
TGGTTTGGATTTCCCATGGTTAATTCGTCTTTATTCAATACGTGTGCTTCTACCATACCG
CCCGTGTGCTTAAATGAATCAGGTCTGCATCCACCGCATTCAATCCTTCTTATTGCGTTT
GAGTTTTCGTTGGTTATTCGCGCAGAAGTCTGATATGATTTTAAAGGAGTTCCGCATCGA
TGACAGCAAAGTCTTTTGTTTTCAGTGTGCAATTGTTTATATACTTTCGCCATTTTTTAT
GATTGAATAAACGTGTATATTTCTGCAAATGCAAATAAGAGTAAACTATATAAAAATAAA
ATTATTCACTAGACTAAAAATAACGCAGAAGAAAAAGTGTATTTTTGACAAATGCAAAAT
ACAGTCATCATATAGGTCTGTGGAGTAAGATGGGATATCGATAGCACATAATATCTCATA
TTTTATAGTTGTAACGCTATTTTACGACCGCGAGAATGCTGTTACGTAATTCTGTAAAAT
ATTCTCTGATTTCTACGATATAAGACGATAAAAGAAAATATAAACCTGTCCCAACTTACC
CCACCCTACCATCTATTGTAAACTTAAAAAGCCTGCTCTGACTAAACTTATAACAAAACG
TCAAATGACTGCCAATCATTTTACTACGCTCTGCTTTATGTTATATTGCATGTCTTAAGT
CTTTACGCATGTCTTTAAATAGTTAATTACGTCCTCAAAACGATAACGCGAAATTTACAA
CTACGTGTAGAGTTGTAGACAGTCGTAAGCCATTGTTATGCTACCTATAGTACGTGTTCT
CTCGCTGCTGCGGGTCATCGGTTAATCCCATTGCTGACTTTACAAGACGAGCTGTTCTTC
TAATTACTGGAACTAGGTTAATTTTCCGAGAAGTTATAAGTTACATAAAATAAA
| ProSiteProfiles |
Sushi_SCR_CCP_dom (IPR000436) - T[1-34] 6.138 - T[36-106] 8.603 |
| SUPERFAMILY |
Sushi/SCR/CCP_sf (IPR035976) - T[3-43] 2.87E-7 - T[61-106] 6.12E-6 |
| CDD |
Sushi_SCR_CCP_dom (IPR000436) - T[38-104] 1.72204E-4 |
| Pfam |
Sushi_SCR_CCP_dom (IPR000436) - T[63-104] 0.002 |
| SMART |
Trypsin_dom (IPR001254) - T[81-345] 0.0011 |
| ProSiteProfiles |
Trypsin_dom (IPR001254) - T[82-350] 12.36 |
| Pfam |
Trypsin_dom (IPR001254) - T[109-217] 2.1E-8 |
| SUPERFAMILY |
Peptidase_S1_PA (IPR009003) - T[109-268] 1.73E-18 - T[311-350] 1.73E-18 |
| Protein Name | Identity | Bit Score | e-value |
|---|
