- Transcript 'KH2012:KH.C2.180.v1....'
Transcript Model
Transcript Id
KH2012:KH.C2.180.v1.A.SL2-1
Possible name(s)
CAPS; CAPS2; CAPSL
Gene model
Location
KhC2 [983,574 / 991,312]
Amino acid sequence
Length: 633
>KH.C2.180.v1.A.SL2-1
INKDVSFVRLKERMSKSPRPNSVPKLELDKLVGEHPEDGKHAQPIKKSHAVQSPTARSDI
SWGTSLSAPYALTSADIRIGRTVHRPCTHITHGDKLQTHQTSNATNVNRRKDNGYDFMQD
KPQKATLKNVKNTASYQTTYNNPAINKHLKAVVSKSHVDKEEENMGAPGVKDNKSTEKNK
SKYWYLDEDMVDKPPSPKEVDTGYTVDDMAKFQTEYTSKPYTGLHELRKYAAEEQLIQKQ
KQDIIEQVLIDQLSKHVISDAEQDKDPSRQNPCDPSSNINAAPLRFRSRRLHNTQVSTVG
ASTESKLKSRTTFGGRIITRDGRDALRELFGFYFHIDQTLTVYEYRRFGKNTNKALPLIE
RGKYCHVVGRRKGKQYSAVDFGLGRNISFSTKNLAHLPDSLKQNPTLVIRICEVTSSQTN
SNWDLESSDRGDGSDTALERNDRKITLKVQSLIRQKIGDRSVSIVVGLGKLFRQLDRSGD
GRLDKQELQRAMEKFNLTLPPQDFQAVWRVVDENNDGAIDYGEFMRSFIGEMNETRNSIV
RKVFKKIDPHKTGYVKLLDMQKLYCVKNHPLVVADKFSETEMKENFMTSFNELSSKNNGQ
ISYVEFDEYYEGVSLTVANDGDFINMMRNCWGV
Nucleotide sequence
Length: 2,506
>KH2012:KH.C2.180.v1.A.SL2-1
ATACGCTCTCTCGTTTCTGCTTAAAATCGTTTAAAGCCGCTTACCTTCGATTTTAATTAT
GTGTGTTATGTGAACGGAATGATGTTAGCATAAATCGCTGTCCGAAATATAAATAAATAA
AGATGTCAGCTTTGTGAGGCTTAAAGAAAGAATGAGTAAATCTCCACGCCCCAACAGTGT
TCCTAAACTGGAATTGGATAAGCTTGTTGGTGAGCACCCAGAAGATGGCAAACATGCACA
ACCAATAAAGAAGTCTCATGCAGTGCAGTCCCCAACTGCAAGATCAGATATAAGTTGGGG
AACTTCACTTTCTGCTCCTTATGCTTTGACAAGTGCTGATATCAGAATAGGGAGAACTGT
ACATCGACCGTGTACACATATCACTCATGGTGATAAATTACAGACTCACCAAACTTCAAA
TGCAACCAATGTTAACAGAAGAAAGGATAATGGATATGATTTCATGCAAGATAAACCACA
GAAAGCAACTTTAAAAAATGTCAAAAACACTGCTTCATATCAAACAACATATAACAATCC
TGCAATTAATAAACATTTAAAGGCAGTTGTTTCTAAGTCACATGTGGATAAAGAAGAAGA
AAATATGGGGGCACCTGGTGTTAAAGACAACAAATCTACAGAAAAGAATAAATCAAAATA
CTGGTATCTTGACGAAGATATGGTGGATAAACCACCCTCACCAAAGGAGGTAGATACTGG
TTATACAGTGGATGATATGGCAAAATTTCAAACAGAATATACATCTAAACCTTATACTGG
ACTTCATGAGTTAAGAAAATATGCAGCAGAAGAACAATTGATCCAGAAACAGAAACAAGA
CATCATAGAACAAGTTCTCATCGATCAATTATCTAAACATGTGATCAGTGATGCAGAACA
AGATAAAGATCCGTCTCGACAGAATCCATGTGACCCATCGTCCAACATCAATGCTGCTCC
GCTTAGATTTCGAAGCAGACGACTCCATAACACGCAAGTAAGCACAGTTGGTGCATCAAC
TGAATCGAAATTAAAAAGTCGAACAACATTTGGAGGTCGAATAATAACTAGGGATGGTCG
GGATGCCCTCCGTGAACTCTTTGGTTTTTATTTCCATATTGACCAAACATTGACTGTGTA
TGAATATCGACGTTTTGGAAAGAACACCAACAAAGCACTCCCTCTGATAGAACGAGGAAA
ATATTGTCATGTTGTTGGCCGAAGGAAGGGAAAACAATATTCTGCAGTTGATTTTGGTTT
AGGAAGAAATATCAGTTTCTCAACAAAAAACCTCGCTCATTTACCAGACTCACTGAAACA
AAACCCAACACTTGTTATAAGAATTTGTGAAGTCACTTCATCGCAAACAAATTCTAATTG
GGATTTGGAGTCATCAGACCGTGGCGATGGTTCAGACACAGCACTGGAACGAAATGATAG
GAAAATTACACTAAAAGTTCAATCATTAATACGTCAAAAGATTGGAGATCGTAGTGTTAG
TATCGTGGTTGGGCTGGGCAAGTTATTCCGACAACTTGATCGATCTGGGGATGGTAGGTT
GGATAAACAGGAACTACAACGTGCGATGGAGAAGTTTAACCTGACACTTCCACCTCAGGA
TTTTCAAGCAGTATGGAGAGTGGTCGATGAGAATAATGATGGAGCGATTGATTATGGAGA
ATTTATGAGATCCTTTATTGGTGAAATGAATGAAACACGAAACTCAATTGTTAGGAAGGT
ATTTAAAAAGATTGATCCTCATAAAACTGGGTACGTGAAGTTACTTGATATGCAGAAACT
CTATTGTGTGAAGAATCATCCACTTGTCGTTGCTGATAAATTTTCCGAGACAGAGATGAA
AGAGAACTTCATGACATCATTTAATGAGTTAAGTTCTAAGAACAATGGACAAATATCTTA
CGTTGAGTTTGATGAGTATTATGAAGGTGTTAGTTTAACTGTTGCAAATGATGGTGATTT
TATCAACATGATGCGAAATTGCTGGGGAGTATGATGTTTCAATGTATTTAAAAATTACTC
ATTTTTTTTCGTTATGTTTTTTTCCTTCACTTTTCAGATGTTTTATTGAAACTGTTCAAG
CTTTTAATGGTTTCTCAAACATTCTAAGTCATTAGTTTATCTCTGAAAACCTTTGCACAA
TAATTTATAACTCTCAAGCACTAACTCCAACCCCACGAATAAAAGTTGACTTTATTTGAT
TGGCTCAATTAATAAACATTGTGTATGATCACAGCAATGAAACAACACATGTTATTTTGC
CCATCCACATACATTTGTATTTGCCAACAGACATATTTGGCAATGTTTTTTAAAAGTTAT
TTCAATATTTTATTTCTTTTAAATTAAATTGATTCGGTGCTATTTAGTTTCATATAACAC
TGTTTTTGCAATTAGTTTTTTAGTCCCTGTAATTTATATATTAATAACATTGCAATTATT
TTAGTGTAAAAATTAAACTTATATTTTTCGTAGCAAATAAATATTT
| ProSiteProfiles |
EF_hand_dom (IPR002048) - T[463-498] 11.25 - T[499-534] 11.305 - T[535-570] 6.758 - T[581-616] 8.125 |
| SMART |
EF_hand_dom (IPR002048) - T[467-495] 0.0071 - T[503-531] 0.25 |
| SUPERFAMILY |
EF-hand-dom_pair (IPR011992) - T[468-631] 1.9E-27 |
| Pfam |
EF_hand_dom (IPR002048) - T[470-526] 5.9E-10 |
| ProSitePatterns |
EF_Hand_1_Ca_BS (IPR018247) - T[476-488] . - T[512-524] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CAPSL_HUMAN | 28.108 % | 93.6 | 8.85E-22 |
| CAYP1_HUMAN | 32.961 % | 117 | 2.64E-30 |
| CAYP2_HUMAN | 40.97 % | 295 | 3.92E-92 |
