- Transcript 'KH2012:KH.C2.180.v1....'
Transcript Model
Transcript Id
KH2012:KH.C2.180.v1.A.ND1-1
Possible name(s)
CAPS; CAPS2; CAPSL
Gene model
Location
KhC2 [983,574 / 991,585]
Amino acid sequence
Length: 633
>KH.C2.180.v1.A.ND1-1
INKDVSFVRLKERMSKSPRPNSVPKLELDKLVGEHPEDGKHAQPIKKSHAVQSPTARSDI
SWGTSLSAPYALTSADIRIGRTVHRPCTHITHGDKLQTHQTSNATNVNRRKDNGYDFMQD
KPQKATLKNVKNTASYQTTYNNPAINKHLKAVVSKSHVDKEEENMGAPGVKDNKSTEKNK
SKYWYLDEDMVDKPPSPKEVDTGYTVDDMAKFQTEYTSKPYTGLHELRKYAAEEQLIQKQ
KQDIIEQVLIDQLSKHVISDAEQDKDPSRQNPCDPSSNINAAPLRFRSRRLHNTQVSTVG
ASTESKLKSRTTFGGRIITRDGRDALRELFGFYFHIDQTLTVYEYRRFGKNTNKALPLIE
RGKYCHVVGRRKGKQYSAVDFGLGRNISFSTKNLAHLPDSLKQNPTLVIRICEVTSSQTN
SNWDLESSDRGDGSDTALERNDRKITLKVQSLIRQKIGDRSVSIVVGLGKLFRQLDRSGD
GRLDKQELQRAMEKFNLTLPPQDFQAVWRVVDENNDGAIDYGEFMRSFIGEMNETRNSIV
RKVFKKIDPHKTGYVKLLDMQKLYCVKNHPLVVADKFSETEMKENFMTSFNELSSKNNGQ
ISYVEFDEYYEGVSLTVANDGDFINMMRNCWGV
Nucleotide sequence
Length: 2,779
>KH2012:KH.C2.180.v1.A.ND1-1
GCCTTCATAACGCTAGGTCTACAACTCAGTTTACTAGGTGAACAAACGACATCAAGATAC
AGAAAACAGCCGAGTTTTGAAGAGCTCGTCTGCTTCTCCACACAGCAACTTGAAGGCCAA
TATGGCGTGAAACATGTGCGCAAATACAAAGACAGGAAGAAATATTTTACACCAAAGCAG
AGTCTTAGCAACAGAAAACGAAAGTTGAATGTACAATCATTATGGAATGCTATGACAATT
ATTATTCAAATGATACGTGCCCATTCAATACAGATACGCTCTCTCGTTTCTGCTTAAAAT
CGTTTAAAGCCGCTTACCTTCGATTTTAATTATGTGTGTTATGTGAACGGAATGATGTTA
GCATAAATCGCTGTCCGAAATATAAATAAATAAAGATGTCAGCTTTGTGAGGCTTAAAGA
AAGAATGAGTAAATCTCCACGCCCCAACAGTGTTCCTAAACTGGAATTGGATAAGCTTGT
TGGTGAGCACCCAGAAGATGGCAAACATGCACAACCAATAAAGAAGTCTCATGCAGTGCA
GTCCCCAACTGCAAGATCAGATATAAGTTGGGGAACTTCACTTTCTGCTCCTTATGCTTT
GACAAGTGCTGATATCAGAATAGGGAGAACTGTACATCGACCGTGTACACATATCACTCA
TGGTGATAAATTACAGACTCACCAAACTTCAAATGCAACCAATGTTAACAGAAGAAAGGA
TAATGGATATGATTTCATGCAAGATAAACCACAGAAAGCAACTTTAAAAAATGTCAAAAA
CACTGCTTCATATCAAACAACATATAACAATCCTGCAATTAATAAACATTTAAAGGCAGT
TGTTTCTAAGTCACATGTGGATAAAGAAGAAGAAAATATGGGGGCACCTGGTGTTAAAGA
CAACAAATCTACAGAAAAGAATAAATCAAAATACTGGTATCTTGACGAAGATATGGTGGA
TAAACCACCCTCACCAAAGGAGGTAGATACTGGTTATACAGTGGATGATATGGCAAAATT
TCAAACAGAATATACATCTAAACCTTATACTGGACTTCATGAGTTAAGAAAATATGCAGC
AGAAGAACAATTGATCCAGAAACAGAAACAAGACATCATAGAACAAGTTCTCATCGATCA
ATTATCTAAACATGTGATCAGTGATGCAGAACAAGATAAAGATCCGTCTCGACAGAATCC
ATGTGACCCATCGTCCAACATCAATGCTGCTCCGCTTAGATTTCGAAGCAGACGACTCCA
TAACACGCAAGTAAGCACAGTTGGTGCATCAACTGAATCGAAATTAAAAAGTCGAACAAC
ATTTGGAGGTCGAATAATAACTAGGGATGGTCGGGATGCCCTCCGTGAACTCTTTGGTTT
TTATTTCCATATTGACCAAACATTGACTGTGTATGAATATCGACGTTTTGGAAAGAACAC
CAACAAAGCACTCCCTCTGATAGAACGAGGAAAATATTGTCATGTTGTTGGCCGAAGGAA
GGGAAAACAATATTCTGCAGTTGATTTTGGTTTAGGAAGAAATATCAGTTTCTCAACAAA
AAACCTCGCTCATTTACCAGACTCACTGAAACAAAACCCAACACTTGTTATAAGAATTTG
TGAAGTCACTTCATCGCAAACAAATTCTAATTGGGATTTGGAGTCATCAGACCGTGGCGA
TGGTTCAGACACAGCACTGGAACGAAATGATAGGAAAATTACACTAAAAGTTCAATCATT
AATACGTCAAAAGATTGGAGATCGTAGTGTTAGTATCGTGGTTGGGCTGGGCAAGTTATT
CCGACAACTTGATCGATCTGGGGATGGTAGGTTGGATAAACAGGAACTACAACGTGCGAT
GGAGAAGTTTAACCTGACACTTCCACCTCAGGATTTTCAAGCAGTATGGAGAGTGGTCGA
TGAGAATAATGATGGAGCGATTGATTATGGAGAATTTATGAGATCCTTTATTGGTGAAAT
GAATGAAACACGAAACTCAATTGTTAGGAAGGTATTTAAAAAGATTGATCCTCATAAAAC
TGGGTACGTGAAGTTACTTGATATGCAGAAACTCTATTGTGTGAAGAATCATCCACTTGT
CGTTGCTGATAAATTTTCCGAGACAGAGATGAAAGAGAACTTCATGACATCATTTAATGA
GTTAAGTTCTAAGAACAATGGACAAATATCTTACGTTGAGTTTGATGAGTATTATGAAGG
TGTTAGTTTAACTGTTGCAAATGATGGTGATTTTATCAACATGATGCGAAATTGCTGGGG
AGTATGATGTTTCAATGTATTTAAAAATTACTCATTTTTTTTCGTTATGTTTTTTTCCTT
CACTTTTCAGATGTTTTATTGAAACTGTTCAAGCTTTTAATGGTTTCTCAAACATTCTAA
GTCATTAGTTTATCTCTGAAAACCTTTGCACAATAATTTATAACTCTCAAGCACTAACTC
CAACCCCACGAATAAAAGTTGACTTTATTTGATTGGCTCAATTAATAAACATTGTGTATG
ATCACAGCAATGAAACAACACATGTTATTTTGCCCATCCACATACATTTGTATTTGCCAA
CAGACATATTTGGCAATGTTTTTTAAAAGTTATTTCAATATTTTATTTCTTTTAAATTAA
ATTGATTCGGTGCTATTTAGTTTCATATAACACTGTTTTTGCAATTAGTTTTTTAGTCCC
TGTAATTTATATATTAATAACATTGCAATTATTTTAGTGTAAAAATTAAACTTATATTTT
TCGTAGCAAATAAATATTT
| ProSiteProfiles |
EF_hand_dom (IPR002048) - T[463-498] 11.25 - T[499-534] 11.305 - T[535-570] 6.758 - T[581-616] 8.125 |
| SMART |
EF_hand_dom (IPR002048) - T[467-495] 0.0071 - T[503-531] 0.25 |
| SUPERFAMILY |
EF-hand-dom_pair (IPR011992) - T[468-631] 1.9E-27 |
| Pfam |
EF_hand_dom (IPR002048) - T[470-526] 5.9E-10 |
| ProSitePatterns |
EF_Hand_1_Ca_BS (IPR018247) - T[476-488] . - T[512-524] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CAPSL_HUMAN | 28.108 % | 93.6 | 8.85E-22 |
| CAYP1_HUMAN | 32.961 % | 117 | 2.64E-30 |
| CAYP2_HUMAN | 40.97 % | 295 | 3.92E-92 |
