- EST 'AHC0AAA234YG07_RM1' >
- Transcript 'KH2012:KH.C2.125.v2....'
Transcript Model
Transcript Id
KH2012:KH.C2.125.v2.A.ND1-1
Possible name(s)
FGF16; FGF20; FGF9
Gene model
Location
KhC2 [4,477,034 / 4,478,981]
Amino acid sequence
Length: 120
>KH.C2.125.v2.A.ND1-1
RCACFIVVAVLEFISTGIGSLTIRGVASGLYLAMNSKGRLYASETFNRECIFYETVLENN
QNTFESFAHRNGSKKCYIALGRHGRPKQGCRLHPNNRHSQFLPRNIDTDKVKNLYSGRLY
Nucleotide sequence
Length: 1,239
>KH2012:KH.C2.125.v2.A.ND1-1
CGAGCGGCAGATGCAGCTTTCTGGGGCGAACCTCGCGCCATATCTCACCGATTTTCGCAT
CGAACGTTCGATCCGAAGAGGTTGGATACCAGATTCCGCTCACAGCATTACGTATTATTC
CCCAAAAGCAGCTGGGAATTTAAAACTCGCTGTCAATCCACGAATCATTGTTAAGCTAGT
TGTAGTTACGGAACGCAACATCCAAACTTACAAGACACAAACAAGCCGCCTTTGAAGCGC
CGATTTTATACTGGGGAAAAATGTGTGTTAGCTTTTGTAGCCATTGACGTCACACGAGGT
TTCGATTACATAATTAACGTTGTGCTTGTTTTATTGTTGTAGCCGTCCTTGAATTTATTT
CTACTGGAATCGGAAGTCTCACCATCCGGGGTGTCGCAAGTGGTCTCTACCTGGCAATGA
ACAGCAAAGGAAGATTGTATGCTTCGGAAACATTCAATCGCGAGTGCATCTTCTACGAAA
CAGTATTGGAAAACAACCAGAACACGTTCGAATCATTCGCCCACAGAAATGGCTCAAAGA
AATGCTACATCGCCCTTGGTCGTCATGGAAGACCAAAGCAAGGATGCAGACTACACCCAA
ACAACCGACACAGCCAATTCTTGCCCAGGAACATCGATACTGATAAAGTAAAAAACCTGT
ACTCTGGCCGACTCTACTGAGTACAGCTACGAAGGTGGAAACTGTACGGACACCTCGGCA
ACGCATCGTAGGATGATTCGCCAAGAGGAAGAAGCACCCTAGCATTACCTTTCCGACAAG
GAAGCTATACGTTTCAGTGTTACACAACTGCCCAGTATTACGCACTAGTTTCACAGCAGA
CGAACGCGGTGAGATCCCCAACTCCTGAGGACCCGCTCCATCTCGAAGATGAGCCCTTTA
GACGCACACAGTAGATACCGCACACACGACATGCCAGCTTGATGTTAAGCTACATTTTGT
TTCAGCACACGCCACGTTAGATTCTGCACCCAAGTCGACGTCGCTCCCCGCCAATTTTAT
TTATTGCTTTTATATTTATCGCTCTACCGCCATATAGTGGCAGCTCGTATATTTTTGTTA
CTTTTATTAATTGTAGTTTCGCCCCGCTGCTTCAAAATCGCACCCCTAGCGTTTTATTTT
AGTTGTTTACCATTTGTTCGTTTATAAGATTTCTACCCAGCTATTTTGCATCCGCCATTT
TATGCAGTGACTTAATAAAGCAATTGAGAATCGAGACTC
| SMART |
Fibroblast_GF_fam (IPR002209) - T[1-105] 7.6E-16 |
| SUPERFAMILY |
IL1/FGF (IPR008996) - T[8-110] 8.83E-34 |
| PANTHER |
Fibroblast_GF_fam (IPR002209) - T[9-120] 8.1E-57 |
| Pfam |
Fibroblast_GF_fam (IPR002209) - T[9-102] 4.2E-30 |
| CDD |
Fibroblast_GF_fam (IPR002209) - T[9-105] 7.16284E-37 |
| PRINTS |
Fibroblast_GF_fam (IPR002209) - T[11-25] 8.8E-14 - T[31-43] 8.8E-14 - T[47-66] 8.8E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FGF16_HUMAN | 41.667 % | 98.6 | 5.9E-27 |
| FGF9_HUMAN | 45.872 % | 106 | 4.27E-30 |
| FGF20_HUMAN | 42.609 % | 101 | 4.39E-28 |