- Transcript 'KH2012:KH.C2.1152.v1...'
Transcript Model
Transcript Id
KH2012:KH.C2.1152.v1.A.ND1-1
Possible name(s)
FIGLA; NHLH1; TAL2
Gene model
Location
KhC2 [7,308,088 / 7,313,971]
Amino acid sequence
Length: 333
>KH.C2.1152.v1.A.ND1-1
RRNAVGYERRSRIKTKCLLSVYSLSREIYRRIDSTYPIMGSITFDGDVGITSSTSTSLDL
TRRRQRLVRLREQSLRESSRLFMESHGQNLNSLRSMTLDGSQSPPLRHNGFQGVSKRREA
NARERLRVRNLNSGFAKLRRILPTVPPNRKPSKVDTLQGAIDYIHQLEQLLEATGGIPDI
GVCSAGNNHPHSRQSVTESPFFPVTDLNPAISSRLSQRRKRFALNTEEDATMTEEKLSET
AAENVSLHRYFPYVHEPAPNCKENRDYAEQTAESANVTNREFYHSESTAEPSVYFPTSLP
SWEFSPLYKYSSNDPLPLCGGIETTTQPNPITV
Nucleotide sequence
Length: 1,766
>KH2012:KH.C2.1152.v1.A.ND1-1
CGAAGGAACGCCGTGGGATACGAAAGGCGAAGTCGGATTAAAACTAAGTGCTTACTGTCA
GTATATAGCTTATCACGTGAAATATACCGTCGTATTGATTCTACATATCCTATAATGGGA
AGCATTACGTTTGATGGTGACGTAGGCATTACGTCATCAACCTCTACGTCATTGGATCTA
ACTCGAAGGCGACAACGGTTGGTTCGGCTGAGGGAGCAGTCGTTACGAGAATCTTCACGA
TTATTCATGGAAAGCCATGGACAAAATTTAAACTCCCTTCGCTCTATGACGTTGGATGGG
TCACAATCGCCCCCGTTACGTCATAATGGTTTCCAAGGAGTATCGAAACGAAGAGAAGCA
AACGCGAGGGAACGACTTAGGGTTCGAAACCTTAACTCTGGATTCGCAAAATTGAGACGG
ATTTTACCAACAGTTCCACCGAATCGTAAACCAAGCAAAGTCGACACTTTACAAGGAGCC
ATAGATTATATTCACCAATTAGAACAGCTGCTCGAAGCGACGGGAGGAATACCAGACATC
GGGGTTTGTTCTGCGGGAAATAACCACCCACATTCCCGCCAGTCAGTCACCGAAAGCCCC
TTCTTCCCTGTCACTGACCTCAACCCTGCTATTTCGTCACGCTTATCGCAACGGCGGAAA
CGGTTTGCGTTAAACACAGAGGAAGACGCCACAATGACCGAAGAAAAATTATCTGAAACG
GCTGCGGAAAACGTTTCTCTACACCGGTACTTCCCCTACGTACACGAGCCTGCACCGAAC
TGTAAGGAAAATCGAGATTATGCGGAACAAACAGCTGAAAGTGCAAACGTCACCAACAGA
GAATTCTACCATTCTGAAAGTACAGCCGAACCTAGCGTGTACTTTCCTACCTCGCTACCA
AGTTGGGAATTTTCTCCTCTTTACAAATATTCCTCCAACGATCCTTTGCCGCTATGTGGC
GGTATTGAGACTACGACTCAACCAAACCCAATAACAGTTTAAATAACATAACATGTTGTT
TCGTTTACCTCTTCGAAAACGATGGAAAAGATCATGTTCATTAAATAACCAAAAAAAGGG
TATCAACAAAAAAAAGGTATTTTTAGTGATCAAAAATCAAGAGCAACACACCCTTTTTAT
TAGACTCTATACGTAAATTGCACCAAATGCCCACGAGTAACCAACACGTAACTCTATGCT
GTATTTTCTTTGCTGGTTGATATGTTGAGCCATACATAAACGGCGTTTGGTGACTTTCTT
TCCTACGCACATGTTTATTATAATACGCCTTGGTGTAATTGTCCAACTCTCTGGCATTAA
CCCAATGGCCCTGTAAGCCCGCATGTATAGGACATACTCCGATAAAACGGCAAGAGAGGT
CGTCGATATTCAAAGTTTGTATCGACTTTACTATCTTTGGAAAGTTTCCGATCCCGTATT
GATTTAACTGCTACGTTTTCTAAAGCAATGATTTGTTTTAGTTCATAACGTGTTCCTTAT
ACATGCAGTAACCGTATTTAACACAAAACACTTTGCTAAAATTAATCGTCTCTTTTCAAA
CCAACACAGTTAAAATGGCGGCAGTATAGCAGGAACTCAAACAGAAAGATCAAATTTCGT
TCGGTCTCCGGTTTTTACACAGAGGCATCAACCGAAACGTGTCTTCCGCAGCCACTTCAT
GTTACTCACGTGACTGTTGTAGGTTCATTCATGCGTGACATGTGACGTAATGTAAAAAAA
ACTCGTAACCTGGTACGAGGTGTATG
| Gene3D |
HLH_DNA-bd_sf (IPR036638) - T[112-175] 3.6E-22 |
| CDD |
bHLH_dom (IPR011598) - T[114-172] 2.53276E-19 |
| SUPERFAMILY |
HLH_DNA-bd_sf (IPR036638) - T[115-173] 2.09E-18 |
| ProSiteProfiles |
bHLH_dom (IPR011598) - T[115-167] 17.111 |
| Pfam |
bHLH_dom (IPR011598) - T[116-168] 7.1E-19 |
| SMART |
bHLH_dom (IPR011598) - T[121-173] 1.0E-19 |
| Protein Name | Identity | Bit Score | e-value |
|---|
