- Transcript 'KH2012:KH.C1.681.v1....' >
- Transcript 'KH2012:KH.L8.11.v1.R...' >
- Transcript 'KH2012:KH.C2.1115.v1...'
Transcript Model
Transcript Id
KH2012:KH.C2.1115.v1.A.SL1-1
Possible name(s)
TMTC1; TMTC2; TMTC4
Gene model
Location
KhC2 [6,993,297 / 7,015,983]
Amino acid sequence
Length: 947
>KH.C2.1115.v1.A.SL1-1
SVIITLEKSLKQVSCLVSQQSLLHRSPGSAMIPTEVVVCGLSAVLVYWNTFQADFVYDDL
KAIVNNPDVTQASPIANIFKNDFWGTPLTHTGSHRSYRPLTTLTFRLNHCLFGLSPGPYH
VTNVLLHCVVTMLFCHVIKIVLNFTSQMSMLAGLMFSLHPVHTEAVAGVVGRADVLATLF
TLSALWIYACVVESHERSNTSVIHQKVSYTPGTLVKEGREPKKKSRSKQLNSGGISNMGL
PTVSCSLRRRRKLSADSGINLPLQRQHAENSDIHYPAIVPLQTSFKKFCFLYSALIFLSA
CALLSKEQGYVTLPLCIAYDVWIRHRLGITSALSALFGRDPMYKTLRRRVWSLAIIFLVS
MILRLSLPVWLSGGGDISPGFSTSDNPAAASESFRCRALTFSYLMFFNVKMLLVPTTLSF
DWSMGSIQLIEDWLDQRNLQTVTFYAISITLSYRLWTKLRHRDLNHKVSPSSSNEPESQD
YFYSQSYETKPYHRDRLSSLLLGFLLLFLSLLPASNLFFYVGFVVAERVLYLPSIGICIL
ITEGAFFLLSLSSHCRSIYKSKLSRSVMFWSLACCLLVSYSLKTFTRNKDWRNEFNLYSS
GVSTNPAKAYGNLGNVLRNQQKLDQAEVAYVTALRHRSNMADVHYNLALLYQDTGRLLQA
ERSYRDAISYRPQLALARLNLGVVLSQLGRNQEAKTVYRETAKLDDRGLKDPRSHAHAQI
SALYNLGCLLAEEGNHVAAVSAYQKAIGRKATHYKYHSILNMLGQSLYQLGRIEEAERSF
KLSLAEKPDHVPSHLTYARLLEKVGKISHAEKLYKNAIQMEPSNPVSYQHYSRLHINRGM
YTEASKLLDKAIEVTEGTPDYELLFAAASAHRHAKSYSTSERYYRLAVKVKPKLASSHMN
LGAILHLQGKLSEARKSYTQALSLKPMDPLVLENLEKLDASLNTKKR
Nucleotide sequence
Length: 3,270
>KH2012:KH.C2.1115.v1.A.SL1-1
AGGCTAAAATAGTGTTCAGTAGAAAAGTCAACGTTTTATTAAAAACAAGCGTGACTTCAA
GATAAGTTGTTGTTCAAGCTGTATCTAGCTAACTGGTCACGGCGCTCCCGTGATCAGTAA
TAATCACGCTTGAGAAATCCTTGAAGCAAGTTTCTTGCCTCGTATCTCAGCAGTCACTAT
TGCATCGATCGCCAGGATCAGCCATGATTCCTACTGAAGTAGTTGTTTGTGGACTTAGCG
CCGTTTTGGTGTATTGGAACACTTTTCAAGCCGACTTTGTCTACGATGATCTAAAAGCGA
TCGTAAACAATCCAGATGTTACCCAAGCCTCGCCGATCGCGAATATCTTCAAAAACGATT
TCTGGGGAACCCCCTTAACACATACCGGTAGCCATAGATCGTATCGTCCATTAACCACTT
TAACGTTTCGATTGAATCACTGTCTTTTTGGATTGAGTCCCGGACCCTACCACGTGACCA
ACGTCCTTCTTCACTGTGTCGTCACAATGCTGTTTTGTCACGTTATTAAAATCGTCCTAA
ATTTTACTTCACAAATGTCAATGCTGGCAGGTCTTATGTTTTCGCTCCATCCTGTCCACA
CGGAGGCGGTAGCAGGAGTTGTCGGACGAGCTGACGTTCTTGCAACTTTGTTCACTTTAT
CAGCACTGTGGATATACGCATGTGTAGTTGAGTCTCACGAAAGAAGCAACACTTCAGTTA
TTCATCAAAAAGTTTCATACACTCCGGGAACTTTGGTAAAGGAAGGTCGAGAACCCAAGA
AGAAATCAAGAAGCAAACAACTTAACTCGGGGGGTATTTCGAACATGGGATTGCCTACGG
TGTCATGCAGTTTACGCAGAAGACGAAAACTGTCAGCGGACAGTGGTATAAACCTTCCTT
TGCAGCGACAGCATGCAGAGAACTCAGATATCCATTATCCTGCCATTGTTCCGCTTCAAA
CCAGTTTCAAGAAATTTTGCTTTTTATATTCGGCTTTAATTTTCCTCTCCGCGTGTGCCC
TTCTATCTAAAGAGCAAGGCTACGTCACTCTCCCACTGTGTATCGCATATGACGTATGGA
TTCGTCATCGTCTCGGAATTACCAGTGCGCTTTCGGCTTTATTTGGGCGGGATCCGATGT
ATAAAACACTTCGACGTCGCGTGTGGAGCTTGGCAATCATCTTTCTTGTCTCGATGATTC
TGCGACTTTCGCTACCCGTTTGGTTATCGGGCGGTGGCGACATTTCTCCCGGGTTTTCGA
CAAGTGATAACCCCGCGGCGGCAAGCGAGAGTTTTCGATGTCGTGCGCTCACATTTTCCT
ATCTGATGTTCTTCAATGTAAAAATGTTGCTTGTACCAACCACGCTTAGCTTTGATTGGA
GCATGGGATCAATACAGCTTATAGAAGACTGGCTGGACCAGAGAAACCTTCAGACTGTTA
CATTTTATGCAATTTCGATAACATTGAGTTATCGGCTATGGACAAAACTTCGTCATCGAG
ATTTAAACCACAAAGTTTCCCCAAGTTCATCAAATGAACCTGAATCTCAGGACTATTTCT
ACTCACAGTCGTATGAAACGAAACCTTACCATCGAGATCGCCTTTCGTCTCTCCTCCTGG
GGTTTCTCCTACTCTTCCTCTCACTCCTCCCGGCATCTAACCTCTTCTTCTATGTGGGAT
TTGTGGTGGCGGAACGAGTCCTCTACCTCCCGAGCATCGGGATTTGCATCCTCATCACAG
AAGGAGCGTTTTTTCTTTTATCTCTCTCCAGTCACTGTCGTTCCATTTACAAATCAAAAC
TTTCCAGATCAGTTATGTTTTGGTCGTTAGCCTGTTGTTTGCTTGTAAGTTACTCATTAA
AAACATTCACCAGAAACAAAGATTGGAGAAACGAGTTTAATCTTTACAGCTCCGGAGTTT
CAACAAATCCAGCAAAGGCCTATGGTAACCTTGGTAACGTGTTACGTAACCAGCAGAAGC
TAGACCAAGCAGAGGTTGCTTACGTCACTGCATTACGTCATAGATCAAATATGGCGGACG
TTCATTATAATCTGGCGTTGCTGTACCAAGACACTGGCCGACTCCTACAAGCAGAACGAA
GTTATAGAGATGCCATTTCATATCGCCCACAGCTGGCGCTAGCGAGACTGAATCTTGGTG
TCGTATTGTCCCAGCTTGGCAGAAACCAAGAAGCGAAAACAGTATACAGAGAAACTGCAA
AGTTGGACGACCGGGGCCTCAAGGATCCACGAAGCCATGCGCATGCGCAGATTTCCGCTT
TGTACAACCTCGGATGCTTATTGGCGGAAGAAGGGAACCACGTGGCGGCAGTTTCAGCCT
ATCAGAAAGCGATCGGGCGGAAAGCAACCCACTATAAATACCATAGCATTCTAAACATGT
TAGGTCAGTCGCTGTACCAGTTGGGTAGAATCGAAGAAGCAGAACGAAGTTTTAAGCTCT
CATTGGCTGAGAAACCAGATCACGTGCCGTCACATTTAACTTACGCCCGACTTCTAGAAA
AAGTTGGAAAAATCTCTCACGCCGAGAAATTGTACAAGAACGCAATTCAAATGGAGCCAA
GTAACCCAGTGTCATATCAACATTACAGTCGGCTACATATAAATAGAGGAATGTATACAG
AAGCCAGTAAGCTACTTGATAAAGCCATTGAGGTCACTGAAGGCACACCGGATTACGAGC
TGCTCTTTGCCGCCGCAAGCGCCCACAGGCACGCAAAATCTTACAGCACGTCTGAGAGAT
ATTACAGATTGGCCGTGAAAGTAAAACCGAAGCTGGCGTCCTCTCACATGAATCTCGGTG
CCATTCTACATCTTCAAGGAAAGCTCTCTGAAGCCAGGAAGTCTTACACGCAAGCCCTGA
GTTTAAAACCTATGGATCCACTTGTGCTCGAAAACCTTGAAAAATTAGACGCAAGTTTAA
ATACCAAGAAGCGATGAAAACAAACGTTTATAAATTAGTCCAATTTAATCAATTAAAGTT
CATGGTGCTGTTGTTACCAATCTTGGATTGGTTAAGTAATTATGTATCAATTGTTTTTCA
CTGTAGTCGTTATTGAGCAAATAATTTCCAATTCTATGACGAACTTCAAACGTACAAATT
TACAAATATAACATGAATTCGCAGTTTTTAATTATGTTGATAAAGTTTTGTCTTTTTAAT
TTTGTTTCTCGTTTCTTCTCTAAATCTTATCAGACCTAATTGTATACAAAGTGCAATAGT
GAAATAAAACGTATATTCTCCGTTAAAAGT
| Pfam |
DUF1736 (IPR013618) - T[378-447] 2.0E-27 |
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[553-942] 6.4E-67 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[604-706] 4.11E-21 - T[720-933] 7.84E-30 |
| SMART |
TPR_repeat (IPR019734) - T[607-640] 1.9E-4 - T[641-674] 0.0053 - T[675-708] 12.0 - T[720-753] 0.017 - T[757-790] 0.028 - T[791-824] 17.0 - T[825-858] 380.0 - T[861-894] 35.0 - T[895-928] 3.1E-5 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[607-640] 7.346 - T[641-674] 9.322 - T[675-708] 7.346 - T[720-753] 7.995 - T[757-790] 8.791 - T[791-824] 8.526 - T[825-858] 6.962 - T[861-894] 6.077 - T[895-928] 10.679 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[607-928] 55.207 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TMTC1_HUMAN | 29.802 % | 226 | 7.71E-62 |
| TMTC4_HUMAN | 29.745 % | 191 | 1.26E-50 |
| TMTC2_HUMAN | 39.349 % | 428 | 2.59E-136 |