- Transcript 'KH2012:KH.C7.502.v2....' >
- Molecular Tool 'cicl25f08-MO (Hamada's MO)' >
- Transcript 'KH2012:KH.C2.1109.v1...'
Transcript Model
Transcript Id
KH2012:KH.C2.1109.v1.A.SL1-1
Possible name(s)
HCRTR1; HCRTR2; NPY5R
Gene model
Location
KhC2 [1,467,464 / 1,472,023]
Amino acid sequence
Length: 496
>KH.C2.1109.v1.A.SL1-1
RYYSADRPPDSMNSRALTSTVLTAGRKFSEANYSVGINSTAVSINQLDFDIWEYYLKPTN
AEWFVMSLYVLVFLISIIGNCLTIAFILRRKHLRTTINYFMLNLALADIMVTIICLPPTL
MVDFMESWLVGQFLCKFTPYLQMAVTSVSSLSLGAIAVNRWFVVCHPLKVARTRRSAKHA
LLTMTSIWLFSLITLCPIIFVTELTEDFPGYKELNLLKSCGEHWTTFLHQAVFHIYYVTV
CYALPLMVMAIAYTNVFRKLSYTKIPGHVSRETNPIPKRRGQCHSCSSNSEHTHRGSTIG
SEPNSPSKSNPSSPTAKKQDGASVGQEHVRNGIDLPMPREQESLFYTGAWKVKRDSEDYK
KLYLQRNRNSSTFSKLITSRKTQRTYCRKCKIKRNLIQSRKRSGRIQVALVVVYFLCYSP
AMVLDLIRRTSDLFTSVHRESTYFLFAIAHLLVYLNSALNPIIYNCFSVRVSGEILFVQR
PRFARSKTPRTVQAVI
Nucleotide sequence
Length: 2,237
>KH2012:KH.C2.1109.v1.A.SL1-1
GTAGTTAAGGGAAGTGGAGTCAGCGGTAAATCAATTTCGCTTTGACCTTCTCCATAGGCC
GACCCCACTCGGAGGAATGCAATTATACGTATGTAATAATAGGAAACTGATTTGGAAGGA
TAGCAATTTGTTTGTAATGAACAGTTTGTGAGCTGTGCGAGAGCACCCGTACAATAAAAC
ATAACATTTTGCCTATGCGTGGTTAATATAGCGAAGTAAGTGGGGTGCTCTGCATTTCAC
GTCAAGAGGTGCTTCACGCAATGACGAATCGATATGCGCGGCATGCGTAGTCGCATTGCA
AGCGTAATGCACAGACGCTTTCCTCCCGTCAGTGAGAAGCAATAAGAGCGGGTACTTGAG
GCGAAACTTCTAATAACGCTACTACTCGGCTGATCGTCCACCAGATAGCATGAACTCGCG
TGCACTGACCAGCACAGTATTGACAGCAGGCCGAAAATTCAGCGAAGCAAACTACAGTGT
CGGAATTAACTCAACTGCTGTGAGCATTAACCAGCTAGATTTCGATATATGGGAGTATTA
TCTCAAGCCAACCAACGCAGAATGGTTCGTTATGTCTTTGTACGTGCTGGTGTTTTTAAT
TTCGATCATCGGAAATTGCCTCACAATAGCGTTCATTCTGCGTCGAAAACATCTCCGTAC
CACAATCAATTACTTCATGCTGAATTTGGCCCTGGCTGATATAATGGTTACCATAATTTG
CCTCCCACCAACACTTATGGTGGACTTCATGGAATCGTGGTTGGTCGGTCAATTTCTCTG
CAAATTCACTCCATATTTGCAGATGGCAGTGACTTCTGTATCGTCTCTCTCCCTTGGCGC
CATTGCGGTTAATCGTTGGTTCGTGGTCTGTCATCCGCTAAAAGTCGCGAGAACACGGAG
ATCGGCAAAGCATGCACTTCTGACCATGACCAGCATCTGGTTGTTCAGTTTGATTACTCT
GTGTCCAATTATTTTCGTCACTGAACTAACCGAAGACTTCCCGGGATACAAAGAGCTGAA
CTTGCTTAAATCATGTGGAGAACATTGGACAACGTTCCTGCACCAAGCCGTTTTCCATAT
ATACTACGTCACTGTATGCTACGCTCTACCGTTGATGGTGATGGCAATCGCTTATACAAA
TGTCTTCCGTAAACTTTCTTACACCAAGATCCCCGGACACGTTTCAAGGGAAACGAACCC
AATTCCTAAACGAAGAGGGCAGTGCCACAGTTGCTCGAGCAATTCAGAGCACACACATCG
CGGTTCGACTATAGGATCAGAACCAAATTCCCCTTCCAAATCGAATCCAAGCAGCCCGAC
CGCAAAGAAGCAAGACGGCGCATCAGTGGGCCAAGAACACGTGCGTAACGGTATTGATTT
ACCGATGCCTAGGGAGCAGGAATCATTGTTCTATACGGGAGCTTGGAAGGTGAAACGAGA
TTCGGAAGATTACAAGAAACTATATTTGCAGCGTAATAGAAACAGCAGCACCTTCAGTAA
ACTGATCACCTCGCGAAAGACACAGCGCACGTACTGCAGGAAATGCAAAATTAAGCGAAA
TTTGATACAGTCTCGAAAAAGAAGCGGGAGGATTCAAGTGGCTCTAGTGGTTGTGTATTT
TCTCTGCTACTCTCCAGCGATGGTACTTGATCTGATCCGAAGAACGTCCGATTTGTTTAC
CTCCGTACATCGAGAGTCGACTTATTTCTTATTCGCGATCGCCCACTTGCTCGTGTATCT
CAACAGCGCTCTTAACCCCATCATTTACAACTGTTTCAGTGTTCGAGTCAGCGGAGAAAT
TCTGTTCGTTCAACGGCCGCGCTTCGCTCGCTCGAAGACACCAAGGACCGTACAAGCTGT
GATATGATGTTGTAACGTAATTCTCCGTATAAGTTTTGTTTGTGAACAAACTTGTCGTCT
TAAGCCGGATGTTTTAATATATAGTAAATAAGGCGGGACAAGATGGTACAACTGTTCATT
TTATTTACTCGTTTAGTAAACAAAGAATATTTAAAGAATTATAAAACAGTATCATACACG
ACATAGATCACGACTCCTATAGACCGTTGTCAGGATATTTGAATATTATGTGCTACGGGT
GTTTTCCCGCCCTACTATATACTTATTTATTGTAACGGTAAACACCTGCTGGCTTTGTAA
GTTTAATTTTTGGTATTCATACACTGTGTCCCGAACGTATCATAGTATATTCGTAAATAA
AGCCAATTCATCTAGAC
| PRINTS |
Orexin_rcpt (IPR000204) - T[47-63] 1.5E-8 - T[115-131] 1.5E-8 - T[167-178] 1.5E-8 - T[224-242] 1.5E-8 - T[257-277] 1.5E-8 |
| PRINTS |
GPCR_Rhodpsn (IPR000276) - T[64-88] 4.3E-35 - T[97-118] 4.3E-35 - T[142-164] 4.3E-35 - T[179-200] 4.3E-35 - T[234-257] 4.3E-35 - T[403-427] 4.3E-35 - T[446-472] 4.3E-35 |
| ProSiteProfiles |
GPCR_Rhodpsn_7TM (IPR017452) - T[79-464] 40.232 |
| Pfam |
GPCR_Rhodpsn (IPR000276) - T[79-464] 1.1E-50 |
| ProSitePatterns |
GPCR_Rhodpsn (IPR000276) - T[148-164] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| OX1R_HUMAN | 41.629 % | 168 | 4.47E-47 |
| OX2R_HUMAN | 38.824 % | 194 | 1.83E-56 |
| NPY5R_HUMAN | 27.759 % | 118 | 9.09E-29 |