Aniseed - Transcript Card

Transcript 'KH2012:KH.C2.1105.v1...'

Transcript Model

Transcript Id

KH2012:KH.C2.1105.v1.A.ND1-1

Possible name(s)

ITLN1; ITLN2

Gene model

KH2012:KH.C2.1105

Location

KhC2 [5,740,394 / 5,747,291]

Sequences

Amino acid sequence

Length: 472

>KH.C2.1105.v1.A.ND1-1
YGSSTNPATSCWDLKNSDVSSDGYYFIQPATTSVPIQVYCDMTTSGGGWTLVASIHENDI
NGKCTAGDMWFSNNLVQHSQFSRNWENTNIFGNVKEATSADYKNIGYSSLKASNLMLRHV
PNKTPLDKSKSLASLQYHTTNNFLNKHGGNLFTTYSRHYPMNPKTTVYTHAPNIGKLADS
IVGIKNLTSAIPDFYNYHWGLLNDRLENGGNRTFTKFGMKISLTFDCTYELQYGKEHRCT
STAITSRKSHPFVAIVGISNANHLKFVFQVQSFRPKDDPVSTYNGKLTEGNFELRYKARC
LYGKDVPSICDVGFVVNNTKEWGSSPFTFTESRHIQWIFPTFQNYTWAAPCATSHLAVPV
TYTIGKSYLSNFVPPSMHSATTTGFLQIRAEAYDGTYYAMCPAVKLYNCIGHYVCIGGVK
NGYNQTYDCSDFPDWEGTERHAGTSNIPDFLTSKNYGHSTKDIESTIMIFYR

Nucleotide sequence

Length: 2,022

>KH2012:KH.C2.1105.v1.A.ND1-1
ATATATGAAGCCTAATGTAGTTTCTAATGATTACGTGAAGCCTAATCCAGTTTCTAATAA
TACAGTTTATGAAGAAGAAATCTACCACAATCCCAAGGAAACTTATCACGATGTAGTTGC
GCCCAAAACGCCAGCAAAACGGGATACTGGGAGAAACAATGGTAATAAACTATCGCAGAA
GTTTTGGAAAATCTTTGCTGGCCTTGTTCTTATGTTGGTTCTTATTGTGGCAATTGTTGG
ACTTTACTACATTGCTGTAAGTCCACCACTAGATTTGTAATACGGCTCATCAACAAATCC
AGCTACATCATGTTGGGATCTAAAGAACTCTGATGTTTCTAGTGATGGTTATTACTTTAT
ACAACCTGCTACTACCAGTGTCCCAATTCAGGTTTATTGTGACATGACAACATCTGGTGG
TGGTTGGACATTAGTAGCATCTATCCATGAGAATGATATCAATGGGAAGTGCACAGCTGG
AGATATGTGGTTCAGTAATAACCTGGTACAGCATTCACAATTTTCAAGAAACTGGGAAAA
CACAAACATATTTGGAAATGTAAAAGAAGCAACTTCGGCTGATTATAAAAACATTGGTTA
CTCATCCCTAAAGGCATCTAACTTGATGTTACGTCATGTACCAAACAAAACACCTTTGGA
CAAATCAAAATCCTTAGCAAGCTTGCAATATCACACAACTAACAACTTCCTGAACAAACA
TGGTGGGAATCTATTTACAACCTACTCAAGGCATTATCCAATGAATCCGAAAACAACAGT
TTACACACATGCGCCCAACATTGGGAAGTTGGCTGACAGCATTGTGGGTATAAAGAACTT
GACTTCAGCAATCCCTGACTTTTATAACTATCATTGGGGACTACTAAATGATCGCTTAGA
AAATGGAGGAAACAGAACATTCACTAAATTTGGAATGAAGATCTCTCTCACGTTTGATTG
CACCTACGAACTTCAATATGGTAAAGAACATAGGTGCACTTCAACAGCTATTACGAGCAG
GAAATCTCATCCATTTGTTGCAATTGTAGGAATTTCAAATGCAAATCACCTTAAATTTGT
GTTTCAGGTTCAAAGCTTCAGACCAAAAGATGACCCAGTCTCCACATACAATGGTAAACT
AACAGAGGGTAATTTTGAGCTTCGATACAAAGCTAGATGCCTTTATGGAAAAGATGTTCC
AAGTATTTGTGATGTTGGTTTTGTGGTCAACAATACAAAGGAGTGGGGTTCTTCCCCATT
TACATTTACCGAATCTAGGCATATCCAATGGATCTTTCCAACTTTTCAGAACTATACTTG
GGCAGCTCCATGTGCAACCAGTCATTTAGCAGTACCGGTAACATACACAATTGGCAAATC
TTATTTGAGCAACTTTGTTCCTCCTTCCATGCACTCAGCAACAACCACTGGATTCTTACA
GATTCGTGCTGAAGCATATGATGGTACTTACTATGCTATGTGCCCTGCTGTTAAGTTATA
CAACTGTATAGGACATTATGTATGTATTGGTGGTGTGAAAAATGGATATAATCAAACATA
TGATTGCAGTGATTTTCCTGATTGGGAAGGCACAGAGAGACACGCTGGAACAAGCAACAT
TCCAGATTTCCTTACCAGTAAGAACTATGGCCATTCTACTAAAGACATTGAATCCACCAT
CATGATTTTTTATCGTTAAAAGCTCAACCTACAAGTAGTCTCCTCAGACAGTGAATAAAC
ATACAGTGGAATAATGTATTACTCAATTAGTGTATTATGTTGTTTTATGTTAATCATCTT
TTAGTTTGATTTATCTTTTCACATAGCATAAAGTCATAAAAAATGTGTATTCGCCCCTTT
TATTCCTTGGACATTGTTGAAGTTTATATGATGTTATTATAGCACGCATGTTTTTTTTAA
AACTTTTTTATTAGTATGATCTAAAAATATTTAATACTGATTTATAATTCTGCTTTTTAA
ACAGAATGTTTACACACTCTTATAGTCCAATTGGAATGTTAT

InterProScan

ProSiteProfiles	Fibrinogen_a/b/g_C_dom (IPR002181) - T[2-62] 13.873
Gene3D	Fibrinogen_a/b/g_C_1 (IPR014716) - T[2-111] 4.3E-11
SUPERFAMILY	Fibrinogen-like_C (IPR036056) - T[5-164] 3.14E-25
Pfam	Fibrinogen_a/b/g_C_dom (IPR002181) - T[11-55] 7.0E-7

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
ITLN2_HUMAN	45.283 %	136	2.98E-36
ITLN1_HUMAN	44.444 %	132	6.89E-35