- Transcript 'KH2012:KH.C2.1099.v1...'
Transcript Model
Transcript Id
KH2012:KH.C2.1099.v1.C.ND1-1
Possible name(s)
LAYN
Gene model
Location
KhC2 [6,114,020 / 6,117,093]
Amino acid sequence
Length: 419
>KH.C2.1099.v1.C.ND1-1
TNMSNKHDGCYKSINGRLGKLHYHRGQNFTDAQKHCERVDNSQLAVMKDNATIYDVVASL
ESYPENRKCIERDFWIGLHKENDKYKWLDGGVWDQTITPVDNSYPGNCVQLYWVRGMKPR
WSQENCSSLSAFLCYTSLTDEPLSTTTVTTFSTLRMTTSSTTHITTSSTPHMTTSPTPRM
TTSLTPCMTTSSTLRMTTSSTPRMTTSSTPRMTTRSTPRMTTSLTPRMTTSSTPRMTTSS
TTRMTTSSATRMTTSLTPPMTTSSTPRIYSNSSLLSESTATAASPQSVSPVLIGAIAGGV
FALLLALILVMYFCRKRKQRNQNLSPAQNPEVNMSLNFNPMYEESAQEKINPIYNMDIEL
RLQPEDASLNLNPQACGSNDVIPVNGDVTPDQNINMNPSPKNEVSFTPDVPYAKVNKKK
Nucleotide sequence
Length: 3,073
>KH2012:KH.C2.1099.v1.C.ND1-1
TTTGAGTTTTAGTGGAGATTGCCATATATTCACAGCTTTCTTAATGTGCTAATATGTAAT
ACAGATTGTTATAGGCTAGGCTGATACCAGTATCTTTAAGGAGCAAAGCATTAAACAAAC
ATGAGTAATAAACATGATGGTTGTTATAAAAGCATTAATGGAAGATTGGGCAAACTTCAT
TATCACAGAGGCCAAAACTTTACTGATGCACAAAAACACTGCGAGAGAGTGGATAATTCA
CAACTTGCCGTTATGAAGGACAATGCTACAATATATGACGTGGTTGCTTCCCTGGAAAGT
TATCCTGAAAATAGAAAGTGTATTGAGAGAGATTTCTGGATAGGTTTGCACAAAGAAAAT
GACAAATACAAATGGTTAGATGGTGGTGTGTGGGATCAAACCATTACACCCGTTGATAAT
AGTTATCCTGGAAACTGTGTTCAACTGTATTGGGTTAGAGGAATGAAACCACGGTGGTCC
CAAGAAAACTGTTCCAGTCTATCAGCTTTCTTGTGTTATACTTCATTAACAGATGAGCCA
CTTTCAACAACAACAGTGACCACCTTCTCGACACTCCGCATGACCACCAGCTCAACAACG
CACATTACCACCAGCTCGACACCGCACATGACCACCAGCCCGACACCGCGCATGACCACC
AGCTTAACACCCTGCATGACCACCAGCTCAACACTGCGCATGACCACCAGCTCGACACCC
CGCATGACCACCAGCTCGACACCCCGCATGACCACCAGGTCGACACCACGCATGACCACC
AGCTTAACACCCCGCATGACCACCAGCTCGACACCGCGCATGACCACCAGCTCGACAACG
CGCATGACCACCAGCTCAGCAACGCGCATGACCACCAGCTTGACACCCCCCATGACCACC
AGCTCAACACCGCGCATATACAGTAATTCAAGCTTATTATCCGAATCCACCGCTACAGCA
GCCTCACCCCAATCTGTATCTCCAGTGCTGATCGGGGCAATTGCAGGAGGAGTTTTCGCG
CTATTGCTCGCACTTATTCTTGTGATGTATTTCTGCAGAAAACGCAAACAGAGAAATCAA
AACCTCAGCCCTGCCCAAAATCCTGAAGTCAACATGAGTTTGAACTTCAACCCAATGTAT
GAAGAATCTGCACAGGAAAAAATCAATCCGATATACAACATGGACATCGAACTTCGCCTT
CAGCCTGAAGATGCTTCATTAAACTTGAATCCTCAAGCGTGTGGTTCTAATGATGTCATT
CCTGTAAATGGTGATGTCACACCTGATCAGAATATTAACATGAACCCATCTCCGAAAAAT
GAAGTCTCATTCACCCCGGATGTACCTTACGCCAAAGTGAACAAAAAGAAATAAACCAAG
GATGCCAGCAGCAGTATCAACTAAACTAAAAGAACTAACTGTGGATGTGCTATATTCAAT
TTCAGCTACATTACTGTTAAGCTTAGTAATTTTTGGTTTTAGTGCTTTTAGTGGCTCACA
AAGTCTTTTGACTGTAAAAGTTAATTATTTTATGTATATAGGCTTAAAAGTATTTGTCTA
AATTGTAATTTTTTCTGAATGGTCGTCTAAGTTTTATTTCTTGGTTACGTTTGTTTCACT
GCTATACAGTAGGGCTTAGTTTTTATGTTAACCTTAAGTTTACAAGGAAGTAAAACGATT
AAAGTCTATTACAACATTTATTGTTCACCGATAGCTATTTATAATAACCGAAACTAAATT
TGCAACGGTATTAGAAACAATGGCCTTATTGCTTTTAGCATGACGTGATACTGTATTGTT
CACTTTCAAAAATTCCCCAGAACTTTTTTTGTAACCCTTTTCCGAAAATTCCCTTTTTTT
ACAAACTTTTTCTTTTTTGTTCTATATGTCACAATTCTTAGCTTGTAAATCTGTGACAGT
ATATATACTGTGTTGTTCTTTGTAGTTCGCTCGTCTCATAGAAGATGACAAACAATGAAA
AGCAAGAAGAGGCTTGTTATGCAAGTAATAATGGAAAATTAGGCCAAGTTTATTTCCACA
GGCAACAGTTAAACTTTACTGATGCACAAAAACACTGCGAGAGAGTGGATAATTCACAAC
TGGCCATCATGAAGGACAATGCTACAATATATGACGTGGTTGCTTCTCTGAAAAGTTTCG
TGCAGCATAATATTACAGATAGATGTTATGACCGATACTTCTGGATAGGTTTAAGCAAAA
AAGGTGACAAATACAAATGGTTGGATGGTGGTGTGTGGGTTAGAATCAATCAACTACAAT
GGTTGAAAACAGTCATCCTGGTAATCCTGGAAACTGTGTATCACTGTTGTGAATTAGAGA
ATCCAAATCACGCTGGATTCCACAAAACTGTTCAACTCCAATAACTTTCTTGTGTTACCC
TCCGTACCCAACTAATGTGATCACCACACCCAGCAGCTCGAACATGCAAACAAACATGAC
TGCGCCATTTATTACACCAGTGATAAAATTGCCTTAGGAATGTTCGCGCTTCTACTCTTA
CTTATCTTTTTGGTGTGTACCTACAGAAGCTGGGTTCTCAGAATGGACAGGTCTGACCCC
CAATATATCAATATTGAACCACCCAATGACTATTATGAAACATGGTATTCGCACCCCATA
TATATATGATACAATCAACTGGTAATATAATAATGTTGCTGCTACCTGGTACTTTAAAAC
ATTTTATTTTGCAACAAAAACTATGACCTATTGTTAACCAGAAAAAGCTACCACTTTAAA
ATTATCCAGAAAAGCGATTATTTATAAAATTGTTTTTAATTACGCCTTTGTTAAAAATCA
TAACAATTTGTGTTGCAACTAAATACCAAGTTAGTGTTATTGGTTTGTACATATTTATTT
ATGGCAAGTGACACTAAAATAGTTTTGGGGAACAATGGCACCAATGTTTTCTTGTATATA
CTATGAGTATAGCACAGCATAGCACAATACTTCACAAAAATTACAGAAAGAAAGCCTTTT
TTACAACCGTTCGCTCTTTTTTGTTATATTAGTCACAATATCCAAACAGTATTTGTTCTA
TTATTATGTTTCT
| SMART |
C-type_lectin-like (IPR001304) - T[2-135] 6.3E-8 |
| ProSiteProfiles |
C-type_lectin-like (IPR001304) - T[6-135] 12.237 |
| Gene3D |
C-type_lectin-like/link_sf (IPR016186) - T[22-175] 6.2E-15 |
| SUPERFAMILY |
CTDL_fold (IPR016187) - T[24-147] 8.93E-17 |
| Pfam |
C-type_lectin-like (IPR001304) - T[27-135] 8.2E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|
