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  1. Transcript 'KH2012:KH.C2.1096.v1...'

Transcript Model

Transcript Id

KH2012:KH.C2.1096.v1.A.nonSL3-1

Possible name(s)

ASPSCR1; UBXN6

Gene model

KH2012:KH.C2.1096

Location

KhC2 [5,175,066 / 5,179,922]

Sequences

Amino acid sequence

Length: 553

>KH.C2.1096.v1.A.nonSL3-1
EKLVCFKISFSSSYVIMSKSVVVLCLSGRRRTVKFTPNFTIVQILEEVCKKENLDPACHE
LRNGRSVVDRSLPWRYTNLPNNAKLELFESKQTEGVSDVRIAVQLDNGHRLQGTFSSPST
LLAIVQNFSEEIKKQLPEEHLKTPSVVYMRQEITGEELLSKSTLRQLGIVKGSALLRLSY
KEQEASTSDQSSSHKSSDPPPSCSSQPPVVEKKSSEPKVFKNSDDLKNINKEDAPKPASP
SDPPITENSSVSSMSVGSVYKSTSDASMMSLPDIVSDPDTADVKEQPSTSKVKRKVSEDG
NSTTKRIKTEESESPEETSYQVDLSNFKFPEESKGQSLYDSASCSYNESALSEPCDRQEV
LFLEKGRNTQSNEEVDDKFFEVTVEDVRNMMADLQQERKKHESKELLTEEIRKARRLEKA
SKYPKVIVRVIFPSRHVLQAMFNPLETMKELYAIVEEHVSQSFYLYTSPPKEILKDKTVT
LFEAGFAPAARVYISANASSTQLLQESSLEKLEDADVANMSLACVFKIPNKTTAATSKNK
EEKLKKFLKIGKS

Nucleotide sequence

Length: 1,958

>KH2012:KH.C2.1096.v1.A.nonSL3-1
AGTTTCGATATAGGGAATTCACCCATAGGCTAAAACAAATTTTAGGAAAAGCTGGTTTGT
TTTAAAATTTCGTTTAGTTCCTCATACGTTATCATGTCGAAATCCGTCGTCGTTCTCTGT
TTATCTGGTAGAAGAAGAACCGTCAAGTTCACTCCAAATTTTACCATTGTGCAGATTTTA
GAAGAAGTTTGCAAAAAAGAAAATCTCGATCCTGCATGTCATGAATTGAGGAATGGTCGA
TCAGTTGTTGATCGTTCGTTACCATGGCGATACACCAACCTACCCAACAATGCAAAACTT
GAACTGTTTGAATCTAAACAAACAGAAGGTGTTTCTGATGTGAGAATTGCCGTACAACTG
GACAATGGTCATCGCTTACAAGGGACTTTTTCTTCCCCATCTACATTGTTGGCAATTGTT
CAAAACTTTTCTGAAGAAATTAAAAAGCAGTTACCAGAAGAGCATTTGAAAACTCCATCT
GTTGTTTACATGAGACAAGAAATAACTGGGGAAGAACTTTTGTCAAAGTCAACTCTTAGG
CAACTTGGAATTGTAAAAGGAAGTGCATTGTTGAGGCTTTCATACAAAGAGCAAGAAGCA
TCCACATCTGATCAATCTTCATCCCATAAGTCTTCCGATCCTCCACCCTCCTGTTCTTCT
CAACCTCCAGTTGTCGAAAAAAAATCTTCAGAACCAAAAGTGTTCAAAAATAGTGATGAC
TTGAAAAACATCAACAAAGAAGACGCTCCAAAACCAGCATCACCAAGCGATCCTCCAATT
ACGGAAAACTCCTCCGTTTCTAGTATGAGCGTGGGATCAGTTTATAAGAGCACAAGTGAT
GCGAGTATGATGAGTCTTCCAGATATAGTGTCTGATCCGGATACAGCGGATGTTAAAGAA
CAACCTTCCACGAGCAAGGTAAAAAGAAAGGTGTCTGAAGATGGTAATTCTACAACAAAA
AGAATAAAAACTGAGGAAAGTGAGTCACCAGAAGAGACTTCATATCAAGTTGATCTTTCC
AATTTCAAGTTTCCGGAAGAAAGCAAAGGGCAGTCACTTTATGACTCAGCATCTTGTTCA
TACAACGAGTCAGCGCTTTCCGAACCATGTGATCGGCAAGAAGTATTGTTTTTGGAAAAA
GGACGAAACACACAATCAAATGAAGAAGTAGATGACAAGTTTTTTGAAGTGACAGTTGAA
GATGTACGGAATATGATGGCAGATTTGCAACAGGAACGCAAAAAACACGAAAGCAAAGAG
TTGCTAACTGAAGAAATAAGAAAAGCAAGGAGATTGGAAAAAGCATCAAAATACCCCAAA
GTTATTGTTAGGGTTATTTTTCCATCTCGTCATGTCTTACAAGCAATGTTTAACCCCTTA
GAAACTATGAAGGAACTCTATGCTATAGTGGAAGAACATGTCTCTCAATCATTTTATTTA
TACACATCACCGCCGAAAGAAATTCTAAAAGACAAAACCGTGACACTGTTTGAAGCAGGA
TTTGCTCCTGCTGCAAGAGTCTACATCAGCGCTAATGCTTCATCAACACAACTGCTTCAG
GAATCTTCTTTGGAAAAGTTAGAAGATGCAGATGTTGCTAATATGAGCTTAGCTTGTGTT
TTCAAAATCCCCAACAAGACAACAGCTGCGACTTCTAAAAACAAAGAGGAAAAGTTGAAA
AAATTTCTAAAAATCGGAAAAAGTTGAAATTTCGCATGTGAATGGTGTTCCAATGCTCCA
AATCTGCAGTACAACTGTTCTTATAATACAAAACTTATTCTCACTTCCTATCTGGAAGTT
AAAGCTGTTGTATTTTTTAAATTTTATTAAGCTGTAAAAATTGGAGGACAGTAGCCGTAG
ATCGAAAACAGTAAAACTTTTTTTCTTTTTCCAGTTGGAAAAAGATACAGATAGAAAGAA
ATGTTTTGGACAGTATCGTTTAAAAAATAATGCTCGAA

InterProScan

SUPERFAMILY
Ubiquitin-like_domsf (IPR029071) - T[20-92] 2.93E-21 - T[396-493] 5.79E-15
Pfam
TUG-UBL1 (IPR021569) - T[25-87] 1.8E-21
Pfam
UBX_dom (IPR001012) - T[422-490] 2.1E-4

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ASPC1_HUMAN 41.243 % 129 4.6E-32