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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R65....' > 
  2. Molecular Tool 'FOG::BMP2/4' > 
  3. Clone 'cien125085' > 
  4. Transcript 'Cisavi.CG.ENS81.R16....' > 
  5. Transcript 'KH2012:KH.C2.1048.v1...'

Transcript Model

Transcript Id

KH2012:KH.C2.1048.v1.A.SL2-1

Possible name(s)

UBE4A; UBE4B; UBOX5

Gene model

KH2012:KH.C2.1048

Location

KhC2 [4,443,116 / 4,445,243]

Sequences

Amino acid sequence

Length: 476

>KH.C2.1048.v1.A.SL2-1
DLFDKMSMNFCHLYLSTTITSSCLCSDGYEAENLLSSTQPNGFQAERFARPPAYITVTFP
IPIQLDRITVRPWVGQQCVKDLQLYIARINRSNALKSVSPDEVKYKAGRAVLSTPVEVSF
VNKHYRAVRCLEKGENEVKQSGIIVDVQGNMDGILAIKLGIISMLTGTVPSIGGLSIWGK
PSNKCKRNLANSVIQKWLQNQNLPQCTLINNSITVLPTLTNKDESDNESADKTEIPKQFV
DPIVCSVMRNPVLLPSGHTVDQHTLDKHIITQSDWGRLPSDPFTGILFTEQYKPVPHVAL
KLQLDSYLLNRKSQNGKSPNLTKTTNQRKRIYSDIDVNENPSKVVKFHSHCSKTHTSVAS
KLDEHDLKLTSLSNSMENSLEAALSKAKIRTSKFRTVKTSFQTTDTIHCCRCKVFLSSVI
IQYSLPCGHRLCRECLHTTSNFERMKPSASSNLTLRLSCPSCETLFNQSDVTRVYK

Nucleotide sequence

Length: 1,540

>KH2012:KH.C2.1048.v1.A.SL2-1
TTTTGTTTCTGTTCACTTATGCCATTAAGATTTGTTTGATAAAATGTCAATGAATTTTTG
TCACCTTTATTTATCAACCACTATCACATCGTCCTGTTTGTGCAGTGATGGCTACGAAGC
AGAGAATCTACTATCTTCCACTCAGCCAAATGGCTTCCAAGCAGAAAGATTTGCGAGACC
TCCAGCTTACATCACGGTAACGTTCCCTATTCCCATACAACTTGACCGAATCACAGTAAG
ACCATGGGTTGGTCAACAATGTGTGAAAGACCTGCAACTTTACATAGCTCGTATCAATAG
ATCAAATGCATTGAAATCTGTTTCTCCTGATGAAGTTAAGTATAAAGCTGGGAGAGCAGT
TCTCAGCACTCCCGTTGAAGTTAGTTTTGTCAACAAACATTACAGAGCAGTTCGATGCCT
TGAAAAGGGTGAAAATGAAGTTAAACAATCTGGTATAATTGTTGATGTACAAGGTAACAT
GGATGGCATTCTTGCAATTAAACTTGGCATAATCAGTATGCTTACTGGGACTGTGCCCTC
TATAGGAGGGCTGAGTATTTGGGGAAAACCTTCAAACAAATGCAAACGGAACTTGGCAAA
CAGCGTTATTCAAAAATGGCTGCAAAACCAGAATTTACCACAATGTACACTTATAAATAA
TAGCATTACAGTTTTACCTACTCTAACAAACAAAGATGAATCTGACAACGAAAGTGCTGA
TAAGACAGAAATTCCAAAGCAGTTTGTTGATCCAATTGTTTGCAGTGTCATGAGAAACCC
AGTTCTGCTTCCAAGTGGGCATACAGTAGACCAGCATACATTAGACAAACATATTATAAC
TCAGTCTGATTGGGGAAGGCTACCATCGGACCCTTTTACTGGCATTCTGTTCACCGAACA
ATACAAACCAGTGCCACATGTTGCTTTGAAACTCCAGCTTGATTCTTACCTTTTAAACAG
GAAGTCTCAAAATGGAAAATCTCCAAATTTAACTAAAACAACTAACCAAAGGAAGCGAAT
TTATTCCGATATAGATGTGAACGAGAATCCTTCTAAAGTAGTAAAATTTCATTCCCACTG
CTCTAAAACACATACAAGTGTTGCATCCAAATTAGATGAACATGATTTGAAACTAACTAG
CTTGTCCAACTCCATGGAAAATAGTTTGGAAGCTGCACTAAGTAAAGCAAAAATACGGAC
TTCTAAGTTTAGGACCGTAAAAACTAGCTTTCAAACAACCGATACCATACATTGTTGCAG
GTGCAAAGTTTTTCTTTCATCAGTTATTATTCAATACTCCCTACCGTGTGGTCATCGTCT
GTGCCGCGAATGTCTGCATACTACAAGCAATTTTGAGCGAATGAAGCCTTCTGCTTCCTC
AAACTTGACTTTGCGTTTAAGCTGCCCGTCATGTGAAACGCTATTTAATCAATCCGATGT
CACACGTGTTTACAAGTGATGTGATTTACCTATACCTCTTTATTTACTCTTTTCATTAAA
TTTCGATAGTAAAAACTAATAAAGTTTATAAATATAAATT

InterProScan

Gene3D
Znf_RING/FYVE/PHD (IPR013083) - T[217-327] 9.1E-14 - T[385-476] 3.4E-6
ProSiteProfiles
Ubox_domain (IPR003613) - T[234-314] 8.786
Pfam
Ubox_domain (IPR003613) - T[235-312] 7.4E-17
SMART
Ubox_domain (IPR003613) - T[238-307] 2.7E-5
ProSiteProfiles
Znf_RING (IPR001841) - T[409-463] 9.583
ProSitePatterns
Znf_RING_CS (IPR017907) - T[427-436] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RNF37_HUMAN 25.54 % 178 7.13E-50