- Transcript 'KH2012:KH.C2.1048.v1...'
Transcript Model
Transcript Id
KH2012:KH.C2.1048.v1.A.ND1-1
Possible name(s)
UBE4A; UBE4B; UBOX5
Gene model
Location
KhC2 [4,443,116 / 4,445,360]
Amino acid sequence
Length: 476
>KH.C2.1048.v1.A.ND1-1
DLFDKMSMNFCHLYLSTTITSSCLCSDGYEAENLLSSTQPNGFQAERFARPPAYITVTFP
IPIQLDRITVRPWVGQQCVKDLQLYIARINRSNALKSVSPDEVKYKAGRAVLSTPVEVSF
VNKHYRAVRCLEKGENEVKQSGIIVDVQGNMDGILAIKLGIISMLTGTVPSIGGLSIWGK
PSNKCKRNLANSVIQKWLQNQNLPQCTLINNSITVLPTLTNKDESDNESADKTEIPKQFV
DPIVCSVMRNPVLLPSGHTVDQHTLDKHIITQSDWGRLPSDPFTGILFTEQYKPVPHVAL
KLQLDSYLLNRKSQNGKSPNLTKTTNQRKRIYSDIDVNENPSKVVKFHSHCSKTHTSVAS
KLDEHDLKLTSLSNSMENSLEAALSKAKIRTSKFRTVKTSFQTTDTIHCCRCKVFLSSVI
IQYSLPCGHRLCRECLHTTSNFERMKPSASSNLTLRLSCPSCETLFNQSDVTRVYK
Nucleotide sequence
Length: 1,657
>KH2012:KH.C2.1048.v1.A.ND1-1
AATCTATTCTACACATGCAGTACATTAATAACACAGTTCAATAAGCAGAGTATGAATAGT
AGCCAGAGTCACCAGTCAGATTAGGACTTGATCAAAGCGATATAATGTCTTCTTTAGTTT
TGTTTCTGTTCACTTATGCCATTAAGATTTGTTTGATAAAATGTCAATGAATTTTTGTCA
CCTTTATTTATCAACCACTATCACATCGTCCTGTTTGTGCAGTGATGGCTACGAAGCAGA
GAATCTACTATCTTCCACTCAGCCAAATGGCTTCCAAGCAGAAAGATTTGCGAGACCTCC
AGCTTACATCACGGTAACGTTCCCTATTCCCATACAACTTGACCGAATCACAGTAAGACC
ATGGGTTGGTCAACAATGTGTGAAAGACCTGCAACTTTACATAGCTCGTATCAATAGATC
AAATGCATTGAAATCTGTTTCTCCTGATGAAGTTAAGTATAAAGCTGGGAGAGCAGTTCT
CAGCACTCCCGTTGAAGTTAGTTTTGTCAACAAACATTACAGAGCAGTTCGATGCCTTGA
AAAGGGTGAAAATGAAGTTAAACAATCTGGTATAATTGTTGATGTACAAGGTAACATGGA
TGGCATTCTTGCAATTAAACTTGGCATAATCAGTATGCTTACTGGGACTGTGCCCTCTAT
AGGAGGGCTGAGTATTTGGGGAAAACCTTCAAACAAATGCAAACGGAACTTGGCAAACAG
CGTTATTCAAAAATGGCTGCAAAACCAGAATTTACCACAATGTACACTTATAAATAATAG
CATTACAGTTTTACCTACTCTAACAAACAAAGATGAATCTGACAACGAAAGTGCTGATAA
GACAGAAATTCCAAAGCAGTTTGTTGATCCAATTGTTTGCAGTGTCATGAGAAACCCAGT
TCTGCTTCCAAGTGGGCATACAGTAGACCAGCATACATTAGACAAACATATTATAACTCA
GTCTGATTGGGGAAGGCTACCATCGGACCCTTTTACTGGCATTCTGTTCACCGAACAATA
CAAACCAGTGCCACATGTTGCTTTGAAACTCCAGCTTGATTCTTACCTTTTAAACAGGAA
GTCTCAAAATGGAAAATCTCCAAATTTAACTAAAACAACTAACCAAAGGAAGCGAATTTA
TTCCGATATAGATGTGAACGAGAATCCTTCTAAAGTAGTAAAATTTCATTCCCACTGCTC
TAAAACACATACAAGTGTTGCATCCAAATTAGATGAACATGATTTGAAACTAACTAGCTT
GTCCAACTCCATGGAAAATAGTTTGGAAGCTGCACTAAGTAAAGCAAAAATACGGACTTC
TAAGTTTAGGACCGTAAAAACTAGCTTTCAAACAACCGATACCATACATTGTTGCAGGTG
CAAAGTTTTTCTTTCATCAGTTATTATTCAATACTCCCTACCGTGTGGTCATCGTCTGTG
CCGCGAATGTCTGCATACTACAAGCAATTTTGAGCGAATGAAGCCTTCTGCTTCCTCAAA
CTTGACTTTGCGTTTAAGCTGCCCGTCATGTGAAACGCTATTTAATCAATCCGATGTCAC
ACGTGTTTACAAGTGATGTGATTTACCTATACCTCTTTATTTACTCTTTTCATTAAATTT
CGATAGTAAAAACTAATAAAGTTTATAAATATAAATT
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[217-327] 9.1E-14 - T[385-476] 3.4E-6 |
| ProSiteProfiles |
Ubox_domain (IPR003613) - T[234-314] 8.786 |
| Pfam |
Ubox_domain (IPR003613) - T[235-312] 7.4E-17 |
| SMART |
Ubox_domain (IPR003613) - T[238-307] 2.7E-5 |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[409-463] 9.583 |
| ProSitePatterns |
Znf_RING_CS (IPR017907) - T[427-436] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RNF37_HUMAN | 25.54 % | 178 | 7.13E-50 |
