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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C8.332.v1....'
  2. Transcript 'Boleac.CG.SB_v3.S148...'
  3. Region 'REG00000860'
  4. Transcript 'KH2012:KH.C8.163.v4....'
  5. Transcript 'KH2012:KH.C2.1026.v1...'

Transcript Model

Transcript Id

KH2012:KH.C2.1026.v1.A.SL1-1

Possible name(s)

DLC1; STARD13; STARD8

Location

KhC2 [1,968,786 / 1,976,645]

Sequences

Amino acid sequence

Length: 1,307

>KH.C2.1026.v1.A.SL1-1
RYITKRIDFDLNLYLLWSMPSATAIPERFLYNRRSCEGAIRRGAITKAELNMNHRSVQSD
PGISLDDLRRSGVLHHLVARVEPKAVVLRRTLADIGAVAKAGAGIQGSITGRPFIPSGYG
IHPAMRHILDQDIGDYYYSPCPAVRRRQQQNRRTYVLDSQVLDHRQTDKVKSTSLSSSAT
SLYSEDDSRSSASPLQSISSCRSSCSFFQTEESESFEEENEMNNNNEEKDESEGIVKIDG
NILVVNLRDFKLSNSENEERQEEDSFVVAPEDHAESCCSTCCSCVKAKESQTDEDDDDDD
DECAISEFWHFEGGEHRWSRLDSKSSNITSPNGRMLSSGSAHLPHLDETLEDMPGDVFTN
ALVRPAAIEIERHRQHYSQSEPKQATKNKSSNSFLKRVGDLKKLRPGSFRRKDILQRTNS
SDAAIELGESRTKPRHTTDIRSKLGRKNRRLVIGEPTLQSGHEKINSMRCVPIEVSPPTG
APRGRKNSSQSLISSSSSASGSASSSSTPASRMRGFAEDRTTRSDPGELNSTSPRLLEHN
RVTLELNAAKTRNPTPPIREPLFVMPKGYKPGTFPSGLVEMTDEEPPTSPSSGFVSNSSS
SRSRSTSDSFHASQASEPTGRLVRPMSIYDNLPDTVLTSGASAQDFLDIMDPSTLVGAMP
VNDSGVFDGSQESLDAPGVLDSAFWSVDQIVEQTQSLQQMVQQMEEIHDDTVEPTTVNSL
ESLPCQFNSAMETLPSYSSENVSVTEDESEALSTSDQLPLSRQPRLRWSSFNLDHTASTS
SESLQIHNLSVGQLMILRKLSVLKLTALMESYASNNNKGSLNWSVPRFIRRIKVPDYKDR
AVFGVPLLHNVQRFGQPLPQCIQRALAYLRRTALDQVGLFRKPGVRSRIQKLRASCENNP
ELSSFDDCTAFDVADMVKQYFRELPDPLMTMKLSDTYVGIFLYVPEELRLQTLQAATMLL
PDETRETLKTLLCFLSDVASRSSENHMNETNLATCFAPSLFHQQYGSLKTMTSASPKIRK
QQKVPGASLGRPDIKEMNENMAANQCLAFMICQVKNLFRIPEDAMTQCRMSVMQQAEDVL
ASEIGYSASDLVVEGDNHADYHSYVDRTVLQTMREEQRISQNKGGWQNVPSSAGSDLSCK
KMHDGNPLRLWRCQVEVSGATEEQLLERILHERHVWDDDLIQWKVLKRPDERTQLFQTAR
AEMSPHPTRDYCVLRSWRRNVNSRGASVIVETSTSNPSMLGDVRGVILASRYVIEPTDDP
LTCQLTHVCRVDTKGRNPEWYNKAYGHVVVQQLLRIRDSVRVMPPKT

Nucleotide sequence

Length: 4,319

>KH2012:KH.C2.1026.v1.A.SL1-1
CGATACATTACCAAGCGAATTGATTTTGATTTGAATTTGTATTTACTGTGGAGTATGCCT
TCAGCTACCGCTATACCAGAGCGGTTCTTGTATAACAGAAGAAGCTGCGAAGGAGCAATT
CGCCGTGGAGCTATTACTAAAGCAGAACTCAACATGAACCACAGAAGTGTCCAGAGCGAT
CCTGGAATAAGCCTGGACGACCTGAGAAGGTCAGGGGTGCTTCATCACCTAGTAGCGCGC
GTAGAGCCAAAAGCAGTTGTACTGCGCCGAACGCTGGCCGACATCGGCGCCGTCGCCAAA
GCGGGCGCGGGGATTCAGGGCTCTATTACCGGCAGACCATTTATCCCTTCCGGGTACGGA
ATACACCCGGCGATGCGACATATCCTCGACCAGGATATAGGCGATTATTATTATTCACCT
TGCCCGGCAGTTCGTCGACGACAACAACAGAACCGAAGAACTTACGTACTCGACTCACAA
GTCCTTGATCATCGTCAAACAGACAAGGTCAAGAGCACTTCACTGTCCTCTTCCGCTACC
AGTCTTTATTCCGAGGATGACTCCAGGTCATCCGCATCACCCCTTCAGTCAATTTCCTCT
TGCCGAAGCTCCTGCAGCTTCTTCCAAACGGAAGAGTCGGAGTCTTTCGAGGAAGAAAAT
GAGATGAACAATAACAACGAGGAGAAAGATGAGAGTGAAGGAATTGTTAAGATCGATGGA
AACATCCTCGTCGTCAACCTCCGGGACTTTAAACTTTCAAACTCCGAAAATGAGGAGAGA
CAAGAAGAGGATTCATTCGTAGTTGCACCGGAGGACCATGCAGAATCCTGCTGTAGCACG
TGCTGCTCATGCGTTAAGGCTAAGGAAAGCCAGACTGATGAAGACGACGACGATGACGAC
GACGAATGCGCCATCAGTGAGTTCTGGCACTTCGAGGGCGGTGAACACAGGTGGTCGAGG
TTGGATAGCAAGTCATCTAACATCACCAGTCCCAACGGTCGAATGTTATCTTCTGGTTCC
GCCCACCTACCCCATCTTGACGAAACGCTTGAGGACATGCCCGGAGACGTGTTCACCAAC
GCTCTGGTTCGGCCAGCCGCGATTGAGATCGAGCGACATAGACAGCATTACAGCCAGTCC
GAACCCAAACAAGCAACAAAAAACAAAAGTTCCAACAGTTTCCTAAAACGAGTCGGTGAC
CTGAAGAAACTGAGGCCAGGTTCCTTTCGCCGAAAGGACATTCTTCAGCGAACCAATTCG
TCTGACGCAGCAATCGAACTTGGGGAATCAAGAACAAAACCCCGCCACACTACCGACATT
CGATCCAAACTTGGCCGAAAGAACCGTCGTCTTGTTATTGGCGAACCGACCCTACAGAGC
GGTCACGAAAAAATTAACAGCATGCGATGCGTGCCTATTGAAGTTTCTCCCCCCACTGGG
GCTCCCAGAGGAAGAAAGAATTCGTCTCAATCTTTAATCAGTTCCTCTTCCTCCGCAAGT
GGAAGTGCAAGTTCGTCATCTACTCCCGCATCCCGGATGCGAGGATTTGCAGAGGACCGA
ACCACGCGTTCCGATCCCGGTGAACTTAACTCGACATCTCCCCGCCTTCTAGAGCATAAT
CGTGTAACTCTGGAGCTTAACGCGGCGAAGACACGAAACCCAACACCACCAATTCGTGAA
CCCCTCTTCGTAATGCCGAAAGGTTACAAACCTGGTACATTCCCCTCCGGTTTGGTTGAA
ATGACGGACGAAGAGCCTCCAACCTCACCGTCCTCCGGTTTCGTTTCCAACTCCTCTTCA
TCACGGAGCAGATCAACCTCCGACTCCTTCCACGCTTCCCAAGCTTCGGAGCCAACCGGA
AGATTGGTACGACCGATGAGCATCTACGACAACCTTCCCGACACTGTTTTAACAAGTGGC
GCTTCCGCCCAAGATTTCCTCGATATTATGGACCCCAGTACACTGGTCGGTGCAATGCCA
GTGAATGACTCTGGTGTTTTTGACGGCAGTCAGGAGTCATTAGATGCTCCCGGTGTGTTG
GACTCTGCATTCTGGAGCGTTGATCAGATCGTCGAGCAAACTCAGTCATTGCAGCAAATG
GTTCAACAAATGGAAGAAATCCATGATGACACAGTAGAGCCGACAACGGTCAACTCCCTT
GAGAGTTTACCTTGTCAGTTTAACAGTGCCATGGAAACTCTGCCATCCTATAGCTCCGAG
AACGTATCTGTCACCGAGGATGAATCCGAAGCACTCTCCACATCCGACCAACTGCCCCTC
TCCAGACAACCCCGTCTACGATGGTCGAGCTTTAATCTCGACCACACAGCCAGCACGAGC
TCGGAGAGTCTGCAGATTCACAATCTATCTGTCGGTCAACTCATGATCCTTCGAAAGCTG
TCGGTCCTCAAGCTGACAGCGCTCATGGAAAGTTACGCATCAAACAACAACAAAGGCTCG
CTCAACTGGTCGGTCCCTCGGTTCATTCGCCGCATCAAAGTACCAGACTACAAAGACAGG
GCGGTGTTCGGCGTTCCGCTTCTTCATAACGTGCAACGCTTCGGCCAACCATTACCTCAG
TGCATACAGCGCGCCCTTGCATACCTCCGGCGAACAGCACTTGATCAAGTGGGCCTCTTC
CGCAAGCCTGGAGTCCGGTCTCGCATCCAGAAGCTTCGTGCGAGTTGCGAGAACAACCCC
GAATTGAGCAGTTTTGACGACTGCACAGCTTTTGACGTTGCTGATATGGTTAAGCAATAT
TTCCGTGAGCTTCCTGACCCACTGATGACGATGAAACTTTCCGACACATACGTTGGAATT
TTCCTATATGTCCCTGAAGAGCTCCGCCTCCAAACGCTTCAAGCAGCAACTATGCTTCTT
CCTGACGAAACCCGTGAGACACTGAAAACGCTTCTATGCTTTCTCAGTGACGTCGCATCT
CGTTCAAGTGAAAATCACATGAACGAAACCAACCTTGCAACTTGCTTCGCCCCTTCCCTC
TTTCACCAACAATACGGAAGCTTAAAGACTATGACATCTGCATCGCCAAAAATACGAAAA
CAACAGAAAGTCCCCGGTGCATCACTCGGTAGACCTGATATTAAGGAAATGAATGAGAAC
ATGGCCGCCAACCAATGTTTAGCCTTTATGATCTGCCAAGTGAAAAACCTCTTCCGGATC
CCAGAAGATGCGATGACGCAGTGTCGAATGTCAGTGATGCAGCAGGCGGAAGACGTTCTC
GCATCCGAGATCGGATACTCTGCCTCCGATTTAGTTGTCGAGGGCGATAACCACGCGGAT
TATCATTCATACGTTGACCGTACGGTGCTCCAAACTATGAGGGAAGAGCAAAGAATCTCA
CAAAATAAAGGAGGTTGGCAGAATGTGCCCAGCTCAGCAGGAAGCGATCTATCTTGCAAA
AAGATGCATGATGGAAACCCGTTGCGACTGTGGCGATGTCAGGTTGAGGTATCTGGTGCG
ACGGAGGAGCAATTACTAGAGCGTATCCTCCACGAGAGGCATGTTTGGGACGACGACCTT
ATACAGTGGAAAGTCCTCAAGCGTCCGGATGAAAGAACTCAACTCTTCCAAACCGCAAGA
GCAGAAATGAGTCCTCACCCAACGAGGGATTACTGCGTTTTAAGATCATGGCGAAGAAAT
GTGAACTCCCGCGGTGCTTCGGTCATCGTTGAAACATCAACCAGCAATCCATCGATGCTT
GGTGATGTACGCGGTGTCATTCTTGCCTCTCGGTACGTCATCGAGCCCACAGACGATCCT
CTCACATGTCAGTTGACGCACGTCTGTCGGGTGGACACCAAAGGCCGTAACCCGGAGTGG
TACAATAAAGCGTACGGCCACGTCGTGGTCCAACAGCTTCTACGAATCCGTGATTCTGTT
CGAGTTATGCCTCCTAAGACATGAGACGATCTTAGGCGAGCAGTCAGTCAACATTGGAGT
CGGAGTTGGAGCCACGGAGTCGAGCGGTTCGCGTTGGTGTTATACTCGTTCCATACCGTC
AACCAATACAAATGTTCATGATGTAAACGATTACACACTTCCCACTAAACCTCAAGACTT
CATTGAATAACACTGCCGTTTGCGGTCAGCATCTTTCCTACGCATCGCTTCCTAAGCCCC
GAATACACCAGTCGTTACCGCTTTAGATGCACTGAGATTTTGCGTTGTTCTTTATTCTGT
TTTACTTCTTTTTTTTATGACTTTTGAGTTTGTTCTTATTATTCCTGGTGTTGTACCTTC
GCCAGTGCTGTTCTCACCTTTATCGCGTTATCACAGAGAATATAGTATTTAAATCGTAA

InterProScan

Gene3D
Rho_GTPase_activation_prot (IPR008936) - T[830-1057] 7.9E-69
SUPERFAMILY
Rho_GTPase_activation_prot (IPR008936) - T[839-1002] 1.82E-44 - T[1030-1058] 1.82E-44
ProSiteProfiles
RhoGAP_dom (IPR000198) - T[845-1058] 35.16
SMART
RhoGAP_dom (IPR000198) - T[856-1055] 1.9E-49
Pfam
RhoGAP_dom (IPR000198) - T[859-1004] 1.8E-36
SMART
START_lipid-bd_dom (IPR002913) - T[1108-1307] 1.4E-12
Pfam
START_lipid-bd_dom (IPR002913) - T[1116-1288] 1.2E-23
Gene3D
START-like_dom_sf (IPR023393) - T[1125-1303] 1.8E-45
ProSiteProfiles
START_lipid-bd_dom (IPR002913) - T[1125-1281] 19.899

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RHG07_HUMAN 37.904 % 514 3.63E-158
STA13_HUMAN 35.019 % 491 2.79E-153
STAR8_HUMAN 41.788 % 411 1.14E-124