- Molecular Tool 'cicl14m06-MO (Hamada's MO)' >
- Transcript 'KH2012:KH.C8.163.v4....' >
- Transcript 'KH2012:KH.C2.1026.v1...'
Transcript Model
Transcript Id
KH2012:KH.C2.1026.v1.A.SL1-1
Possible name(s)
DLC1; STARD13; STARD8
Gene model
Location
KhC2 [1,968,786 / 1,976,645]
Amino acid sequence
Length: 1,307
>KH.C2.1026.v1.A.SL1-1
RYITKRIDFDLNLYLLWSMPSATAIPERFLYNRRSCEGAIRRGAITKAELNMNHRSVQSD
PGISLDDLRRSGVLHHLVARVEPKAVVLRRTLADIGAVAKAGAGIQGSITGRPFIPSGYG
IHPAMRHILDQDIGDYYYSPCPAVRRRQQQNRRTYVLDSQVLDHRQTDKVKSTSLSSSAT
SLYSEDDSRSSASPLQSISSCRSSCSFFQTEESESFEEENEMNNNNEEKDESEGIVKIDG
NILVVNLRDFKLSNSENEERQEEDSFVVAPEDHAESCCSTCCSCVKAKESQTDEDDDDDD
DECAISEFWHFEGGEHRWSRLDSKSSNITSPNGRMLSSGSAHLPHLDETLEDMPGDVFTN
ALVRPAAIEIERHRQHYSQSEPKQATKNKSSNSFLKRVGDLKKLRPGSFRRKDILQRTNS
SDAAIELGESRTKPRHTTDIRSKLGRKNRRLVIGEPTLQSGHEKINSMRCVPIEVSPPTG
APRGRKNSSQSLISSSSSASGSASSSSTPASRMRGFAEDRTTRSDPGELNSTSPRLLEHN
RVTLELNAAKTRNPTPPIREPLFVMPKGYKPGTFPSGLVEMTDEEPPTSPSSGFVSNSSS
SRSRSTSDSFHASQASEPTGRLVRPMSIYDNLPDTVLTSGASAQDFLDIMDPSTLVGAMP
VNDSGVFDGSQESLDAPGVLDSAFWSVDQIVEQTQSLQQMVQQMEEIHDDTVEPTTVNSL
ESLPCQFNSAMETLPSYSSENVSVTEDESEALSTSDQLPLSRQPRLRWSSFNLDHTASTS
SESLQIHNLSVGQLMILRKLSVLKLTALMESYASNNNKGSLNWSVPRFIRRIKVPDYKDR
AVFGVPLLHNVQRFGQPLPQCIQRALAYLRRTALDQVGLFRKPGVRSRIQKLRASCENNP
ELSSFDDCTAFDVADMVKQYFRELPDPLMTMKLSDTYVGIFLYVPEELRLQTLQAATMLL
PDETRETLKTLLCFLSDVASRSSENHMNETNLATCFAPSLFHQQYGSLKTMTSASPKIRK
QQKVPGASLGRPDIKEMNENMAANQCLAFMICQVKNLFRIPEDAMTQCRMSVMQQAEDVL
ASEIGYSASDLVVEGDNHADYHSYVDRTVLQTMREEQRISQNKGGWQNVPSSAGSDLSCK
KMHDGNPLRLWRCQVEVSGATEEQLLERILHERHVWDDDLIQWKVLKRPDERTQLFQTAR
AEMSPHPTRDYCVLRSWRRNVNSRGASVIVETSTSNPSMLGDVRGVILASRYVIEPTDDP
LTCQLTHVCRVDTKGRNPEWYNKAYGHVVVQQLLRIRDSVRVMPPKT
Nucleotide sequence
Length: 4,319
>KH2012:KH.C2.1026.v1.A.SL1-1
CGATACATTACCAAGCGAATTGATTTTGATTTGAATTTGTATTTACTGTGGAGTATGCCT
TCAGCTACCGCTATACCAGAGCGGTTCTTGTATAACAGAAGAAGCTGCGAAGGAGCAATT
CGCCGTGGAGCTATTACTAAAGCAGAACTCAACATGAACCACAGAAGTGTCCAGAGCGAT
CCTGGAATAAGCCTGGACGACCTGAGAAGGTCAGGGGTGCTTCATCACCTAGTAGCGCGC
GTAGAGCCAAAAGCAGTTGTACTGCGCCGAACGCTGGCCGACATCGGCGCCGTCGCCAAA
GCGGGCGCGGGGATTCAGGGCTCTATTACCGGCAGACCATTTATCCCTTCCGGGTACGGA
ATACACCCGGCGATGCGACATATCCTCGACCAGGATATAGGCGATTATTATTATTCACCT
TGCCCGGCAGTTCGTCGACGACAACAACAGAACCGAAGAACTTACGTACTCGACTCACAA
GTCCTTGATCATCGTCAAACAGACAAGGTCAAGAGCACTTCACTGTCCTCTTCCGCTACC
AGTCTTTATTCCGAGGATGACTCCAGGTCATCCGCATCACCCCTTCAGTCAATTTCCTCT
TGCCGAAGCTCCTGCAGCTTCTTCCAAACGGAAGAGTCGGAGTCTTTCGAGGAAGAAAAT
GAGATGAACAATAACAACGAGGAGAAAGATGAGAGTGAAGGAATTGTTAAGATCGATGGA
AACATCCTCGTCGTCAACCTCCGGGACTTTAAACTTTCAAACTCCGAAAATGAGGAGAGA
CAAGAAGAGGATTCATTCGTAGTTGCACCGGAGGACCATGCAGAATCCTGCTGTAGCACG
TGCTGCTCATGCGTTAAGGCTAAGGAAAGCCAGACTGATGAAGACGACGACGATGACGAC
GACGAATGCGCCATCAGTGAGTTCTGGCACTTCGAGGGCGGTGAACACAGGTGGTCGAGG
TTGGATAGCAAGTCATCTAACATCACCAGTCCCAACGGTCGAATGTTATCTTCTGGTTCC
GCCCACCTACCCCATCTTGACGAAACGCTTGAGGACATGCCCGGAGACGTGTTCACCAAC
GCTCTGGTTCGGCCAGCCGCGATTGAGATCGAGCGACATAGACAGCATTACAGCCAGTCC
GAACCCAAACAAGCAACAAAAAACAAAAGTTCCAACAGTTTCCTAAAACGAGTCGGTGAC
CTGAAGAAACTGAGGCCAGGTTCCTTTCGCCGAAAGGACATTCTTCAGCGAACCAATTCG
TCTGACGCAGCAATCGAACTTGGGGAATCAAGAACAAAACCCCGCCACACTACCGACATT
CGATCCAAACTTGGCCGAAAGAACCGTCGTCTTGTTATTGGCGAACCGACCCTACAGAGC
GGTCACGAAAAAATTAACAGCATGCGATGCGTGCCTATTGAAGTTTCTCCCCCCACTGGG
GCTCCCAGAGGAAGAAAGAATTCGTCTCAATCTTTAATCAGTTCCTCTTCCTCCGCAAGT
GGAAGTGCAAGTTCGTCATCTACTCCCGCATCCCGGATGCGAGGATTTGCAGAGGACCGA
ACCACGCGTTCCGATCCCGGTGAACTTAACTCGACATCTCCCCGCCTTCTAGAGCATAAT
CGTGTAACTCTGGAGCTTAACGCGGCGAAGACACGAAACCCAACACCACCAATTCGTGAA
CCCCTCTTCGTAATGCCGAAAGGTTACAAACCTGGTACATTCCCCTCCGGTTTGGTTGAA
ATGACGGACGAAGAGCCTCCAACCTCACCGTCCTCCGGTTTCGTTTCCAACTCCTCTTCA
TCACGGAGCAGATCAACCTCCGACTCCTTCCACGCTTCCCAAGCTTCGGAGCCAACCGGA
AGATTGGTACGACCGATGAGCATCTACGACAACCTTCCCGACACTGTTTTAACAAGTGGC
GCTTCCGCCCAAGATTTCCTCGATATTATGGACCCCAGTACACTGGTCGGTGCAATGCCA
GTGAATGACTCTGGTGTTTTTGACGGCAGTCAGGAGTCATTAGATGCTCCCGGTGTGTTG
GACTCTGCATTCTGGAGCGTTGATCAGATCGTCGAGCAAACTCAGTCATTGCAGCAAATG
GTTCAACAAATGGAAGAAATCCATGATGACACAGTAGAGCCGACAACGGTCAACTCCCTT
GAGAGTTTACCTTGTCAGTTTAACAGTGCCATGGAAACTCTGCCATCCTATAGCTCCGAG
AACGTATCTGTCACCGAGGATGAATCCGAAGCACTCTCCACATCCGACCAACTGCCCCTC
TCCAGACAACCCCGTCTACGATGGTCGAGCTTTAATCTCGACCACACAGCCAGCACGAGC
TCGGAGAGTCTGCAGATTCACAATCTATCTGTCGGTCAACTCATGATCCTTCGAAAGCTG
TCGGTCCTCAAGCTGACAGCGCTCATGGAAAGTTACGCATCAAACAACAACAAAGGCTCG
CTCAACTGGTCGGTCCCTCGGTTCATTCGCCGCATCAAAGTACCAGACTACAAAGACAGG
GCGGTGTTCGGCGTTCCGCTTCTTCATAACGTGCAACGCTTCGGCCAACCATTACCTCAG
TGCATACAGCGCGCCCTTGCATACCTCCGGCGAACAGCACTTGATCAAGTGGGCCTCTTC
CGCAAGCCTGGAGTCCGGTCTCGCATCCAGAAGCTTCGTGCGAGTTGCGAGAACAACCCC
GAATTGAGCAGTTTTGACGACTGCACAGCTTTTGACGTTGCTGATATGGTTAAGCAATAT
TTCCGTGAGCTTCCTGACCCACTGATGACGATGAAACTTTCCGACACATACGTTGGAATT
TTCCTATATGTCCCTGAAGAGCTCCGCCTCCAAACGCTTCAAGCAGCAACTATGCTTCTT
CCTGACGAAACCCGTGAGACACTGAAAACGCTTCTATGCTTTCTCAGTGACGTCGCATCT
CGTTCAAGTGAAAATCACATGAACGAAACCAACCTTGCAACTTGCTTCGCCCCTTCCCTC
TTTCACCAACAATACGGAAGCTTAAAGACTATGACATCTGCATCGCCAAAAATACGAAAA
CAACAGAAAGTCCCCGGTGCATCACTCGGTAGACCTGATATTAAGGAAATGAATGAGAAC
ATGGCCGCCAACCAATGTTTAGCCTTTATGATCTGCCAAGTGAAAAACCTCTTCCGGATC
CCAGAAGATGCGATGACGCAGTGTCGAATGTCAGTGATGCAGCAGGCGGAAGACGTTCTC
GCATCCGAGATCGGATACTCTGCCTCCGATTTAGTTGTCGAGGGCGATAACCACGCGGAT
TATCATTCATACGTTGACCGTACGGTGCTCCAAACTATGAGGGAAGAGCAAAGAATCTCA
CAAAATAAAGGAGGTTGGCAGAATGTGCCCAGCTCAGCAGGAAGCGATCTATCTTGCAAA
AAGATGCATGATGGAAACCCGTTGCGACTGTGGCGATGTCAGGTTGAGGTATCTGGTGCG
ACGGAGGAGCAATTACTAGAGCGTATCCTCCACGAGAGGCATGTTTGGGACGACGACCTT
ATACAGTGGAAAGTCCTCAAGCGTCCGGATGAAAGAACTCAACTCTTCCAAACCGCAAGA
GCAGAAATGAGTCCTCACCCAACGAGGGATTACTGCGTTTTAAGATCATGGCGAAGAAAT
GTGAACTCCCGCGGTGCTTCGGTCATCGTTGAAACATCAACCAGCAATCCATCGATGCTT
GGTGATGTACGCGGTGTCATTCTTGCCTCTCGGTACGTCATCGAGCCCACAGACGATCCT
CTCACATGTCAGTTGACGCACGTCTGTCGGGTGGACACCAAAGGCCGTAACCCGGAGTGG
TACAATAAAGCGTACGGCCACGTCGTGGTCCAACAGCTTCTACGAATCCGTGATTCTGTT
CGAGTTATGCCTCCTAAGACATGAGACGATCTTAGGCGAGCAGTCAGTCAACATTGGAGT
CGGAGTTGGAGCCACGGAGTCGAGCGGTTCGCGTTGGTGTTATACTCGTTCCATACCGTC
AACCAATACAAATGTTCATGATGTAAACGATTACACACTTCCCACTAAACCTCAAGACTT
CATTGAATAACACTGCCGTTTGCGGTCAGCATCTTTCCTACGCATCGCTTCCTAAGCCCC
GAATACACCAGTCGTTACCGCTTTAGATGCACTGAGATTTTGCGTTGTTCTTTATTCTGT
TTTACTTCTTTTTTTTATGACTTTTGAGTTTGTTCTTATTATTCCTGGTGTTGTACCTTC
GCCAGTGCTGTTCTCACCTTTATCGCGTTATCACAGAGAATATAGTATTTAAATCGTAA
| Gene3D |
Rho_GTPase_activation_prot (IPR008936) - T[830-1057] 7.9E-69 |
| SUPERFAMILY |
Rho_GTPase_activation_prot (IPR008936) - T[839-1002] 1.82E-44 - T[1030-1058] 1.82E-44 |
| ProSiteProfiles |
RhoGAP_dom (IPR000198) - T[845-1058] 35.16 |
| SMART |
RhoGAP_dom (IPR000198) - T[856-1055] 1.9E-49 |
| Pfam |
RhoGAP_dom (IPR000198) - T[859-1004] 1.8E-36 |
| SMART |
START_lipid-bd_dom (IPR002913) - T[1108-1307] 1.4E-12 |
| Pfam |
START_lipid-bd_dom (IPR002913) - T[1116-1288] 1.2E-23 |
| Gene3D |
START-like_dom_sf (IPR023393) - T[1125-1303] 1.8E-45 |
| ProSiteProfiles |
START_lipid-bd_dom (IPR002913) - T[1125-1281] 19.899 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RHG07_HUMAN | 37.904 % | 514 | 3.63E-158 |
| STA13_HUMAN | 35.019 % | 491 | 2.79E-153 |
| STAR8_HUMAN | 41.788 % | 411 | 1.14E-124 |