Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C1.96.v2.A.ND5-1

Possible name(s)

ATP5MC1; ATP5MC2; ATP5MC3

Gene model

KH2012:KH.C1.96

Location

KhC1 [914,132 / 915,507]

Sequences

Amino acid sequence

Length: 128

>KH.C1.96.v2.A.ND5-1
QKTLNMYCARIISASPAMLRTIRAMRPVTCAALRPELLSNTATRAIQTTAVQKDIDSAAK
FIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFTYAILGFALSEAMGLFCLMV
AFLILFAL

Nucleotide sequence

Length: 843

>KH2012:KH.C1.96.v2.A.ND5-1
CCGAAACCGACTGAACTTGCGTGAGGAGGTCAGAGTGATAAACCAAATACGATACAGTTG
TTCGTTTAGAAATTAAATGTATTTTTTGTGTGATCCGCGCCTAAAATGCACGCAAAATAA
CCGTTGTCGGGAGTCCTAAAACTAAGCCGATAACCCGCATGTTACGTTTAGTTTATTTGT
AACGTAAAGACTAATAACATTATATTTGTATTACAGTATAGCCGTGGTATTAACAGAAAA
CATTAAACATGTACTGTGCAAGAATCATCTCTGCTTCCCCAGCAATGCTCCGTACCATTC
GTGCGATGAGACCAGTAACTTGTGCAGCACTTAGACCAGAACTTTTAAGCAACACCGCAA
CCAGGGCTATTCAAACCACCGCTGTACAGAAGGATATTGACTCCGCTGCCAAGTTCATTG
GGGCTGGAGCAGCCACTGTGGGTGTTGCAGGTTCAGGTGCCGGTATTGGAACGGTTTTCG
GCAGTTTAATCATCGGATATGCAAGAAACCCCTCCCTGAAACAACAGCTTTTCACATACG
CCATCCTTGGTTTTGCGTTGTCTGAAGCTATGGGTCTCTTCTGTCTTATGGTTGCTTTCC
TGATCCTGTTTGCTCTATAGAAGAATATAGCTCGACCAAAACTATTCAAATATTAATGTT
TTACTGTTAAACCCGTGCTTTGTGATCGCCAAAACTTCTTTTCACATTCTGTTGCCAACG
TTCAACTGAATTTGCGATTTAATTTATAAAAGTTGACACTCTACCCTTCTCTCTGCAAGT
TCAAATTATTGGGTTCTAAAATAAAAACGTTTAAAACAATGTTGGTGTGTTTATATGAAA
TGC

InterProScan

PANTHER	ATP_synth_F0_csu (IPR000454) - T[21-128] 8.4E-55
Gene3D	ATP_synth_F0_csu_sf (IPR038662) - T[55-126] 3.1E-38
Hamap	ATP_synth_F0_csu (IPR000454) - T[57-125] 14.015
SUPERFAMILY	F/V-ATP_Csub_sf (IPR035921) - T[57-127] 1.12E-19
PRINTS	ATP_synth_F0_csu (IPR000454) - T[62-81] 9.5E-32 - T[83-98] 9.5E-32 - T[100-125] 9.5E-32
Pfam	ATPase_proteolipid_c-like_dom (IPR002379) - T[62-124] 7.7E-12
ProSitePatterns	ATP_synth_F0_csu_DDCD_BS (IPR020537) - T[90-111] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
AT5G2_HUMAN	61.871 %	166	4.48E-54
AT5G1_HUMAN	68.504 %	157	5.74E-51
AT5G3_HUMAN	62.857 %	159	2.64E-51