- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'Harore.CG.MTP2014.S7...' >
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- Transcript 'KH2012:KH.L85.1.v3.A...' >
- Transcript 'KH2012:KH.C1.942.v1....'
Transcript Model
Transcript Id
KH2012:KH.C1.942.v1.A.ND1-1
Possible name(s)
SLC6A1; SLC6A11; SLC6A13
Gene model
Location
KhC1 [7,727,743 / 7,734,641]
Amino acid sequence
Length: 602
>KH.C1.942.v1.A.ND1-1
VAKYSLLISSSGWAKPAEFILSLLGYVVGAGNLWRFSSLCFKNGGGAFLIPYVISTCFIT
LPLYMFEVGLGQFTQKGRVAAMERLPIMKGIGYATVFISVLGMIPFMWTMSWGILYLGHS
FTTGPLPWGTCADKNVKKRMIIIETQRRVLKFWNGKIVQVSFTDNEWNTESCRVGVNITN
RTVFLQDSLPQVQFWRNYVLRLSNGNPYNENFNWQMLLCSLASFITIYGCIAKGVKTSGK
VVYFTATFPYVILCVLFVRGATLEGASNGMRKLFVPDFERLLSPQVWVEAASQALYTVGV
CYSGLTAFGSFNRRRNNFYKQAIFVIPAGCLTSIFMGLITFSFLGHIAHVNKVDLTNVIS
SGPGLVFQVYPYGLSLLPIPQLWSVLFFFMFYLICIDSAFGEFEGLMVVIGDAFPISVSN
TKNRLLTGAALTASLYFSCFMFLNQKSLYIFELVNSYGGAGICLLWLALWESISVGWFWN
ADKFAIDFKYMTGSTPSIYYKYCYKFVIPAATTAILIFYCIKWEPLKVGEYVYPWWANGI
GWMLSLSSILWIPGVACYVMVNGKGSLSKRFKQGIKWGFEQSYEGEVKVENEIQKLKAQS
DV
Nucleotide sequence
Length: 1,930
>KH2012:KH.C1.942.v1.A.ND1-1
GTTGCAAAATATAGTTTATTAATTTCCAGTTCGGGATGGGCCAAACCAGCAGAATTTATA
TTGAGCCTGTTGGGGTACGTCGTTGGCGCTGGAAACTTGTGGAGATTTTCATCTCTTTGC
TTCAAAAACGGTGGAGGGGCATTTTTGATACCGTATGTAATCTCCACATGCTTTATAACC
TTACCACTGTACATGTTCGAAGTTGGACTTGGCCAATTTACGCAGAAGGGGAGAGTGGCT
GCAATGGAAAGATTACCAATCATGAAGGGAATCGGTTACGCCACTGTATTTATCTCGGTG
TTAGGCATGATACCATTCATGTGGACAATGTCTTGGGGAATATTATACCTTGGTCATTCA
TTTACGACCGGGCCTCTGCCGTGGGGAACCTGTGCAGATAAGAATGTTAAGAAAAGAATG
ATTATTATTGAGACGCAGCGACGTGTTCTGAAATTTTGGAATGGGAAAATTGTTCAAGTT
TCGTTTACAGATAACGAATGGAATACAGAATCGTGTAGAGTGGGTGTAAATATTACGAAT
AGAACCGTCTTTCTGCAAGATTCATTGCCACAAGTACAATTTTGGAGAAACTACGTTCTG
AGACTTTCCAATGGTAACCCATACAACGAGAATTTCAACTGGCAAATGCTCTTATGTTCT
TTGGCGTCTTTTATAACGATATATGGATGCATAGCAAAAGGAGTAAAGACCAGCGGAAAG
GTTGTTTATTTCACTGCCACTTTTCCATACGTCATACTCTGCGTGCTTTTCGTAAGAGGA
GCTACATTAGAAGGTGCTTCGAATGGGATGAGGAAACTTTTTGTCCCAGATTTCGAACGC
CTTCTCTCACCCCAGGTTTGGGTTGAAGCAGCATCACAGGCGCTTTACACAGTGGGTGTG
TGTTACTCTGGATTGACAGCATTTGGAAGCTTCAATCGTCGTCGCAACAATTTCTATAAA
CAAGCAATTTTCGTTATACCAGCCGGGTGTCTCACATCAATATTCATGGGGTTGATAACG
TTTAGTTTTCTTGGACATATTGCCCATGTTAATAAAGTGGATCTTACAAATGTTATCAGT
TCAGGTCCTGGACTTGTTTTTCAAGTTTATCCTTATGGGTTAAGTTTGTTGCCTATTCCC
CAACTTTGGTCCGTTTTGTTCTTCTTTATGTTTTATCTTATTTGCATCGACAGTGCGTTT
GGTGAGTTTGAAGGGCTGATGGTTGTTATTGGAGATGCTTTTCCCATTTCTGTTTCAAAC
ACTAAAAATCGTTTGCTGACCGGCGCAGCACTTACTGCATCACTTTACTTTTCCTGCTTC
ATGTTTCTTAACCAGAAATCTCTATACATATTCGAATTAGTGAACTCTTACGGGGGCGCT
GGCATTTGTCTTCTGTGGTTAGCTCTTTGGGAGTCCATTTCAGTTGGTTGGTTCTGGAAC
GCTGATAAATTTGCCATCGACTTTAAATACATGACCGGCAGCACCCCTTCTATATATTAC
AAATACTGCTACAAATTTGTAATACCAGCTGCAACAACGGCAATTCTGATATTCTATTGC
ATCAAATGGGAACCACTTAAAGTTGGTGAATATGTTTACCCATGGTGGGCGAATGGTATT
GGTTGGATGCTTTCTCTTTCATCTATTTTATGGATACCCGGCGTTGCTTGTTATGTTATG
GTAAATGGTAAAGGTTCTTTATCAAAAAGATTTAAACAAGGCATCAAGTGGGGCTTTGAG
CAAAGTTATGAAGGAGAAGTAAAAGTTGAAAATGAAATACAGAAATTGAAAGCCCAATCT
GATGTCTAAACAAGAGCAAATGGCGTGACACGTCCCCACCTTATTTTTAAGCGTCTTCAC
GTGCAACCGATATCATGATAATAAATGTGATCACTCTTGTGGGAAGTCCCATTGAATAAA
CCGAACTACG
| ProSiteProfiles |
Na/ntran_symport (IPR000175) - T[9-565] 77.261 |
| SUPERFAMILY |
SNS_sf (IPR037272) - T[12-140] 1.22E-127 - T[189-560] 1.22E-127 |
| PANTHER |
Na/ntran_symport (IPR000175) - T[12-573] 1.9E-186 |
| Pfam |
Na/ntran_symport (IPR000175) - T[13-561] 1.9E-139 |
| PRINTS |
Na/ntran_symport (IPR000175) - T[18-39] 4.1E-49 - T[47-66] 4.1E-49 - T[90-116] 4.1E-49 - T[241-258] 4.1E-49 - T[323-343] 4.1E-49 - T[377-396] 4.1E-49 - T[461-481] 4.1E-49 - T[501-521] 4.1E-49 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| S6A13_HUMAN | 36.475 % | 378 | 7.2E-124 |
| S6A11_HUMAN | 36.318 % | 381 | 8.39E-125 |
| SC6A1_HUMAN | 34.891 % | 380 | 1.09E-124 |