- Transcript 'Mooccu.CG.ELv1_2.S67...' >
- Transcript 'Mooccu.CG.ELv1_2.S67...' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
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- Transcript 'KH2012:KH.C1.92.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.C1.92.v1.A.SL1-1
Possible name(s)
RPRD1A; RPRD1B; RPRD2
Gene model
Location
KhC1 [2,193,740 / 2,200,485]
Amino acid sequence
Length: 1,021
>KH.C1.92.v1.A.SL1-1
VYLTTFCNCYCVTSCKARKITMAKPLKPETVLKKLKSVSNTQDSIPMLSLWIIHHKAHHK
LIVDHWLKVLKNSKASHRLTLLYLCNDVIQNCRRKNAAIYKETFTDTLPEAVAHLRDQSI
RSNVQRVMKIWSKRGVFDSEYTDQLLAALLANRAPEKLRNKLLVEYKTSDLISEITQFKE
LEDKIEVDEKRLRAIRVDVSSTEAIKKLKDKVGGEKFSREFEESAVQLEEFLGQFEKYVE
QRKQLLEVLEKGTVYYHAQYHEAKIVVNAYKNFEGRVNKMKRGLDKLKSKFPSPVHSPSV
DAPSPVNTPLDVDDNQEDMEMSDEDKELGNKPSKIVASGKSFRSKTVAEKKPDEENVLKL
ITSNINVLKNQNESAAESLKRVVSGLVNRPGMRGLANSMGEKDTSRSLTITRSNDLQSGS
LDDSMKISTPGSASPPSPTGSPDLNISSPPRHQSLDSRLADLFSSGAAGAVMKDSAESDT
ESDVVGPPESLETKLKSLAAGLPGLGGLNEIKVTNSDDLPAPPMNFYSSNQVSSADTITT
SVKSTENSVKPTSSVSINQSIPVIRSFSRIDTEGGSSTPTMDENPPFIHSSSIDNKLKNS
QSFLSPPGFLSAPNNPFNFLSNVLGSSTKQEATPEAPPADQKDPNDRNLDKQPYEHTSTS
NIPSFTTEWDKRQAARGSSSQGSSSTSKWENFTVSVSTSSSTSPIPPPPAPWDFPLLSSV
MRNEEPQMKKTKWDDAGNYRDDPSESANMEAAFTATASATSNRRNSNLITLSTQDSEPIP
TTASAPSATETPSKNRFNPISHKDSDDKNSWHSETLKRKPQSSYNEYSDSNPTHQFQNFA
PTPELPKHQSQNGSQYKNQQESYHEHHEPAEEYRPSSSSHHYGKEQERSFSHSHDRIHRE
KDRPTSGPRFLSRGHGTSQIQRGPRPSFQSARPRAPVPLYDDHYEEQLLQLELEMLEEDQ
RIDAAVQRELSMRGPSYGSRQPRPWQRAPVPQREHQQRPRMIRGGMPPRPLRGMARPRMW
Y
Nucleotide sequence
Length: 3,456
>KH2012:KH.C1.92.v1.A.SL1-1
ATGAGTATACTTAACGACATTTTGTAACTGTTACTGTGTTACAAGCTGTAAAGCAAGGAA
AATTACAATGGCAAAGCCACTCAAACCAGAAACCGTGCTCAAGAAGCTAAAAAGTGTGTC
CAACACTCAAGATAGCATTCCAATGTTATCACTTTGGATTATTCACCATAAAGCACATCA
CAAACTGATTGTTGATCATTGGCTTAAGGTTCTGAAGAACTCCAAAGCATCTCACAGACT
GACTTTATTATATCTTTGCAATGATGTCATACAAAACTGCCGAAGAAAAAATGCAGCAAT
TTATAAAGAAACTTTTACGGATACTTTACCTGAAGCGGTGGCACATTTAAGAGACCAATC
CATAAGATCAAATGTACAGAGAGTTATGAAAATTTGGTCAAAACGGGGAGTATTTGACAG
CGAATATACTGATCAACTTTTGGCTGCCTTGCTTGCGAACAGGGCTCCTGAAAAATTAAG
AAATAAACTGCTTGTTGAATATAAGACTTCTGACCTGATATCCGAGATCACTCAGTTTAA
AGAGTTAGAAGATAAAATTGAAGTTGATGAGAAAAGATTGAGAGCCATTAGGGTTGATGT
ATCAAGTACTGAAGCAATCAAAAAGTTAAAAGATAAGGTTGGTGGGGAAAAATTTTCTCG
CGAGTTTGAAGAATCTGCTGTTCAACTAGAGGAGTTTCTGGGGCAGTTTGAGAAATACGT
GGAACAGAGGAAACAGTTACTGGAGGTTTTGGAAAAAGGGACTGTGTATTACCATGCTCA
GTATCATGAAGCTAAAATAGTTGTCAATGCATACAAAAATTTTGAGGGTCGAGTTAATAA
AATGAAGAGGGGTTTGGATAAACTGAAGAGCAAATTTCCATCTCCTGTTCACTCCCCATC
TGTGGATGCTCCATCTCCCGTAAATACTCCTTTGGATGTGGATGACAATCAGGAGGACAT
GGAGATGTCAGATGAAGACAAGGAGCTTGGAAATAAACCATCAAAGATAGTAGCATCTGG
GAAATCTTTTCGAAGCAAAACAGTCGCAGAGAAGAAACCAGATGAAGAGAATGTGTTGAA
GCTGATTACAAGCAATATCAACGTGTTAAAGAACCAAAATGAAAGTGCAGCTGAATCTTT
AAAACGTGTGGTATCTGGGTTGGTGAATCGACCCGGCATGAGAGGACTTGCTAACAGCAT
GGGGGAAAAAGACACTTCTCGTTCTCTGACAATCACAAGGTCTAATGATCTTCAATCTGG
CAGCCTTGATGACTCTATGAAGATTTCGACTCCCGGGAGCGCCTCTCCCCCGTCTCCAAC
TGGATCCCCGGATCTCAACATCTCTTCTCCTCCTCGTCACCAGAGCCTCGACTCCCGCCT
CGCCGATCTTTTTAGCTCCGGAGCAGCAGGAGCAGTGATGAAGGACAGTGCTGAGAGTGA
CACCGAATCGGATGTTGTGGGTCCTCCAGAGTCTTTAGAAACAAAGTTAAAGAGCTTGGC
TGCTGGACTTCCAGGCCTTGGAGGTTTAAATGAGATCAAAGTTACAAATTCTGATGATCT
TCCTGCTCCACCGATGAATTTCTACTCCTCCAACCAAGTGTCATCTGCAGACACAATCAC
AACATCAGTAAAGAGCACCGAAAATTCTGTGAAACCAACATCCAGTGTTTCAATCAATCA
AAGCATCCCTGTTATCCGCTCCTTCTCTCGGATCGATACGGAAGGAGGTTCCTCCACTCC
TACAATGGATGAGAATCCCCCCTTCATCCACTCCTCTTCTATTGATAACAAATTGAAAAA
CTCCCAAAGCTTTCTCTCCCCACCTGGATTTCTATCCGCACCAAACAATCCATTCAATTT
CCTCTCCAATGTGTTGGGTTCATCCACAAAGCAAGAAGCAACCCCAGAAGCTCCACCTGC
CGACCAAAAAGACCCCAACGACCGAAATCTAGACAAACAACCATATGAGCATACGAGTAC
TTCAAATATTCCTAGTTTCACAACAGAGTGGGATAAAAGACAAGCTGCTCGTGGCTCTTC
CTCACAAGGCTCCTCATCAACATCAAAATGGGAGAACTTTACGGTCAGCGTGAGCACATC
AAGCTCCACTTCCCCAATCCCCCCTCCACCAGCTCCTTGGGACTTTCCTCTCCTCTCTAG
TGTGATGAGGAACGAGGAGCCTCAGATGAAGAAGACAAAATGGGATGATGCAGGCAACTA
CAGGGATGACCCGAGTGAGTCGGCAAACATGGAAGCAGCATTCACTGCTACAGCATCTGC
AACTTCAAATCGCCGTAACAGTAATCTTATAACTTTGTCCACCCAAGACAGCGAACCGAT
ACCCACGACTGCTTCTGCTCCGTCTGCAACTGAAACTCCTTCCAAAAATCGATTTAATCC
TATTTCGCATAAGGACTCTGATGATAAAAACAGCTGGCATTCGGAAACATTAAAGAGAAA
ACCACAATCGAGCTACAATGAATATTCGGATTCAAATCCCACACACCAGTTCCAGAATTT
TGCCCCTACGCCAGAATTGCCCAAACACCAGTCCCAGAATGGAAGTCAGTACAAAAACCA
ACAAGAGTCATATCATGAACATCATGAGCCAGCAGAAGAGTACAGACCTTCAAGCTCTTC
TCACCATTATGGTAAAGAGCAGGAACGGTCATTTTCGCACAGCCATGACAGAATCCACAG
AGAAAAAGATCGTCCAACTTCAGGACCCAGATTTTTATCTCGAGGTCATGGCACTTCACA
AATCCAACGCGGTCCAAGACCAAGTTTCCAATCAGCACGACCACGTGCTCCGGTACCATT
ATACGATGATCATTATGAAGAACAACTGTTGCAGCTTGAGCTTGAGATGCTGGAGGAAGA
CCAACGTATCGACGCAGCAGTGCAACGCGAATTGAGCATGAGGGGCCCAAGTTATGGCAG
CAGGCAACCAAGACCATGGCAGCGGGCTCCAGTACCGCAGAGGGAGCACCAACAACGTCC
ACGTATGATTCGTGGTGGAATGCCTCCAAGACCACTGCGTGGAATGGCCAGGCCAAGAAT
GTGGTATTGATTGGTGATCATGGTAAGAACCCTAGAGCAAGAGAATGGGTGTAGTCTTCA
GTTTGGTCTACGAATTTTTTTATGTGGTATATATGTCCGCTGCTATGGTGTGAGTTTTAA
ACACCAGTTATTTTAGATTAACCAAAATGCTTGTGTTTTGAACATTTTTAAGTAGATTTT
GTCAAGAATTCTCAGTAGAAGTACGTCAAGAGTCGATTGACAGAAAGTTGCAAGAGACCC
CTTTTCAAAATTAGTGGATAAAAATGCCTGCTGCTACTATTATCTATTGTAAATACTAAT
TCTGTTCGTTACGTGTTCTTAGCGTTCTTTTTCATTCGCGCAAAGGTTTTGTACATAACC
AAAAAATATCTGGAACAGAATGTCTGTTAAAACTGA
| ProSiteProfiles |
CID_dom (IPR006569) - T[23-153] 33.395 |
| Gene3D |
ENTH_VHS (IPR008942) - T[26-162] 1.3E-36 |
| SMART |
CID_dom (IPR006569) - T[30-150] 1.9E-30 |
| SUPERFAMILY |
ENTH_VHS (IPR008942) - T[33-150] 7.72E-19 |
| Pfam |
RNA_pol_II-bd (IPR006903) - T[78-137] 4.0E-16 |
| Pfam |
CREPT (IPR032337) - T[180-292] 2.5E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RPRD2_HUMAN | 43.804 % | 285 | 7.08E-80 |
| RPR1A_HUMAN | 28.618 % | 120 | 6.49E-30 |
| RPR1B_HUMAN | 29.719 % | 108 | 9.39E-26 |