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TRANSCRIPT CARD

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  1. Clone 'cien193186'
  2. Transcript 'KH2012:KH.C1.901.v1....'

Transcript Model

Transcript Id

KH2012:KH.C1.901.v1.A.SL1-1

Possible name(s)

CALU; RCN1; RCN3

Location

KhC1 [2,720,445 / 2,722,310]

Sequences

Amino acid sequence

Length: 313

>KH.C1.901.v1.A.SL1-1
NKMLIRCVVILLVASAAFAGVARQDRVLDPKLSDKEPGSPEYDHEAFLGKDQAEELDELP
EEESKRRLGIIVDQVDKNRNGQVTETELLEWIKFTQKRYVDEDAEKQFKIYDKNNDNMVH
WDEYKVTTFGFLEDDQEQVNGEDSESYRKMTERDHRRFREADVDKDDRCTKEEFKAFLHP
EEFEHMRDLVARETLEDIDKNKDGFVDVKEYIGDMRRDDDEKENLEWVVHEEEQFKDIRD
TNGDGKMDVTEIKDWILPADYDHASAEAKHLVYTADDDKDGELSKEEILNHHDTFVGSQA
TDWGEALKRHQEF

Nucleotide sequence

Length: 1,865

>KH2012:KH.C1.901.v1.A.SL1-1
TTGGACCTCTGACTGTTTTATAAAACAAAATGTTGATAAGGTGTGTTGTTATTCTTCTGG
TGGCTTCAGCAGCTTTTGCTGGGGTTGCTAGGCAAGATAGAGTTTTGGATCCAAAACTGA
GCGACAAAGAACCAGGTTCTCCGGAATATGATCATGAGGCATTTCTTGGAAAAGATCAGG
CAGAAGAGCTTGATGAGCTCCCGGAAGAAGAGAGCAAGAGGCGGCTTGGGATCATTGTGG
ATCAGGTGGATAAAAATAGGAATGGTCAAGTGACAGAAACTGAACTTTTGGAGTGGATTA
AATTCACACAAAAGAGATACGTAGACGAAGATGCGGAGAAACAGTTTAAAATTTATGATA
AAAATAACGACAATATGGTCCATTGGGATGAATATAAAGTCACAACGTTTGGGTTTCTTG
AAGATGATCAGGAGCAAGTTAATGGAGAAGATTCGGAAAGTTACCGGAAGATGACGGAGA
GAGATCACAGGAGATTTAGGGAGGCAGATGTTGATAAAGATGATCGTTGCACAAAGGAAG
AGTTTAAAGCATTCCTGCATCCAGAGGAGTTTGAGCACATGCGAGATCTAGTCGCTAGAG
AGACTTTGGAGGACATTGATAAGAATAAAGATGGTTTTGTGGATGTGAAAGAGTACATCG
GAGACATGAGGAGGGATGACGATGAGAAAGAAAATCTCGAGTGGGTCGTCCATGAAGAAG
AGCAGTTTAAGGACATCAGAGATACAAATGGAGACGGGAAAATGGACGTAACAGAAATTA
AAGATTGGATTCTTCCAGCGGATTATGACCACGCTTCAGCTGAAGCAAAACATCTTGTTT
ATACGGCAGATGATGATAAGGATGGAGAACTCAGTAAAGAGGAAATATTAAACCATCATG
ACACCTTTGTTGGTTCTCAAGCCACTGACTGGGGAGAGGCTTTAAAACGACATCAGGAGT
TTTAAGTTTGGAGCAGGCTGAAAATATAAAGTACATAAAATGCTTTTTTTAAGTAAAATT
AATTTTGGAAAGTATTTTATGTACTAAATTGGCTGCCTACTAATTGTTACTGCTTTAATT
GCAATTGGCAACTGAAATTTGACAGAGCTGTATCTGTATTCAAGACACAATAACCTAAAA
ATGATTTGGTATTAGAAAGTATGAACTAAATTATTTTTCTACCTTTTTCCTACCAATTCT
GACTGCTTGAATTGGCACCTGAAATTTGACAGAGTTGTATCTGTATACAAGACACAATAG
CTAAAAATCCTTTTTGATTCAGCTTTTATAAGGCTAATCCTGCCTGTGCCTCTTGATTAT
AATACACACTGCTCTTCCAACCTTAGGAAATAGTAGCACCTTACTACATGTATCAGCATA
TCTATTCTCATGCAGTGTTTGCTTTATATATGTGATGCCAGAAGACTGACAAATTTTAGT
ACACTAATAAGTATTATTTTATTTATACAAGTAGCAGTATGTTGTAAAAAATATTGTTAA
AAGTAAAAGGCTATGGATACTTTTTAAAATTGTGTGATAGATAGTATTAATATTTTTATT
TAGCTCTTAAAGTTTTTTTTTAACAATTAGCAACAGTTAGCCAAACAGGTATCCATTACC
AACTATAAACTAATAGCCTATGAACTAACTACTAACTAAAGTTAATATTTAGGTATTCCT
TTAATTCTTATACCTTTGCGGATTGTGCATTTCGTTAGCTATAACGGTAAACTGTTTAAA
AACACATTAGAAGTTGTACTAAACAAAATTTATATACCGAAATATCCCTTTTAAAATTAG
CCAAATATTATTTTTACTGGTGCAGAGACAAAATTCTCAGTTTTTTAAATGTTAATTGTG
ACAAA

InterProScan

SUPERFAMILY
EF-hand-dom_pair (IPR011992) - T[62-177] 4.16E-13 - T[152-307] 1.02E-25
ProSiteProfiles
EF_hand_dom (IPR002048) - T[63-98] 10.524 - T[99-134] 9.743 - T[149-184] 8.042 - T[186-221] 10.413 - T[240-262] 7.93 - T[263-298] 7.735
SMART
EF_hand_dom (IPR002048) - T[67-95] 84.0 - T[103-131] 34.0 - T[153-181] 7.8 - T[190-218] 0.39
ProSitePatterns
EF_Hand_1_Ca_BS (IPR018247) - T[76-88] . - T[162-174] . - T[199-211] . - T[240-252] . - T[276-288] .
Pfam
EF_hand_dom (IPR002048) - T[193-211] 0.0046

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CALU_HUMAN 53.459 % 317 3.75E-108
RCN3_HUMAN 46.844 % 261 4.12E-86
RCN1_HUMAN 50.667 % 270 1.34E-89