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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C13.183.v1...' > 
  2. Transcript 'KH2012:KH.C5.155.v1....' > 
  3. Transcript 'KH2012:KH.C4.531.v2....' > 
  4. Transcript 'KH2012:KH.C5.81.v2.A...' > 
  5. Transcript 'KH2012:KH.C1.878.v1....'

Transcript Model

Transcript Id

KH2012:KH.C1.878.v1.A.ND1-1

Possible name(s)

KH.C1.878

Gene model

KH2012:KH.C1.878

Location

KhC1 [7,147,655 / 7,160,700]

Sequences

Amino acid sequence

Length: 1,067

>KH.C1.878.v1.A.ND1-1
RQYTRCELTDGRSKRMSLETERVPAVVKYSRTEPMISVMNLNGKSIMSTNEPSNYMSNMM
LPEMVRATRTHPLGPDCIISRNEITDQKSLRSVNYYWYISHEKGCVECVVKMSRGGTNVT
TSDPKCVVTRKHRRFEAYCCMICRSNFVTVVQALLHLKAIHRSTSKILIQDLDIFHNIEK
AMEVPPVPLPWHIAKKYVDQDKTLDFSDFKKGDYEQNVNNYVIPPGATLTSAANDMTLEQ
LAGKNYHRTCLKIGYNEARFNKSDSPNTVISIISAIAKEFEKPISALSFSDDSAQVTIKF
ADGNLVVAQTPDLVGVDKNEKILTNIDTDSILTFTSVRTKGEDNTEILTLLANDRPLARK
LFSETIVKGVRDKDKSTLETETEKSQLIKRPHSSSTESIPTETKSPPIKTNKPIKSVRFM
LGAPDSSDDERPSTPDKNGRLHKILESKLVRHEAVSTTTLKPTSYDTASALSPSKEETTE
ATADTFDGLRNVVDDLITTASKGRIIPPPPASPQATSADTTLSLPLVGSSPQLSNLISVA
TKEKTTSTLTRVQSWSPSLGGASFSVASMRRPYTARGFTYAEKIELMKQQNDYDAEFISQ
LNRKTATSSATTTTKSQFSNASMKSTNVSTSGRKDRKGRRKFKGFNNNQQINKDKDESSS
SDAETKQAKPNSNKNWDEELSSQSNDSDHNSTYSDEHPPTLLNPAAAAAAYTGLLRTAIM
SGAGFPSVPVSDYYGSGEWATAAMETLKSLQSTMDTKNFEEKVESMPKVAEDFPPNISES
IKKEFLEIDFDSLNPPMDTMSDDPSYLSDSTNHTSRKRSKSNEPQTSHHNEKDNNPVSPK
RHKPDSDPTLDVLSKNKTLEKIRSSPKRLSPLLSDSEKRMIVHRSKSSISSQPPKIRESG
SLLAAHLRAKTSMMGSKSCSDPALSSRLLESNPLPNKKESKKSSAKSSNQQAAAGDTLVF
LNDITMKDFNNNESTLTWFCPKTKMNENKLTKDSAKTQMNMPEVFKNCVDTYMKVRLIQK
MHVCKVCGFSIVATDSGEDGEKMLQTHVMEHSLKEIYQTGSEIENWK

Nucleotide sequence

Length: 4,017

>KH2012:KH.C1.878.v1.A.ND1-1
ATCGTTGAATAGAATCGTTTCGGGTTATGACGTCAGTATACCCGATGTGAGCTCACAGAC
GGCAGGTCGAAACGTATGAGCTTAGAGACAGAACGAGTTCCCGCCGTTGTCAAGTATTCA
AGAACTGAACCGATGATTTCGGTAATGAACCTAAACGGCAAATCGATAATGAGCACAAAT
GAACCAAGCAACTACATGAGCAACATGATGCTACCTGAGATGGTGAGAGCAACAAGAACC
CACCCACTCGGCCCAGACTGCATTATTTCCAGGAATGAAATAACAGATCAGAAATCCCTG
AGATCAGTAAACTACTACTGGTATATTTCTCATGAGAAAGGGTGTGTGGAGTGTGTTGTG
AAGATGTCACGAGGGGGAACCAATGTAACAACATCTGATCCCAAGTGTGTGGTGACAAGA
AAACATCGTCGTTTTGAAGCATATTGCTGCATGATATGCAGATCAAATTTTGTCACTGTT
GTGCAGGCCCTTCTGCATTTGAAAGCAATACACAGATCTACAAGTAAGATTCTTATACAA
GACCTTGATATTTTCCACAACATTGAAAAAGCAATGGAAGTTCCCCCTGTTCCACTTCCG
TGGCACATTGCAAAGAAATATGTAGATCAGGACAAAACCTTGGATTTCTCAGACTTTAAA
AAGGGCGATTATGAGCAAAATGTGAACAACTACGTCATACCACCTGGTGCAACACTGACG
TCTGCAGCAAATGATATGACACTGGAGCAGCTTGCAGGTAAGAATTACCACCGAACCTGT
TTAAAAATAGGATATAATGAGGCACGTTTTAATAAAAGTGATTCCCCCAACACGGTAATA
AGCATTATATCGGCGATTGCAAAAGAGTTCGAGAAGCCGATATCTGCTTTGTCATTCAGT
GATGACTCAGCGCAAGTAACAATCAAGTTTGCTGACGGCAACTTGGTGGTCGCTCAAACC
CCGGATCTTGTTGGTGTTGACAAAAATGAAAAAATATTGACTAATATTGACACTGATTCA
ATCCTTACGTTCACATCCGTTCGTACGAAAGGTGAAGACAACACAGAAATCCTAACTCTG
CTCGCAAATGATCGTCCATTGGCAAGAAAACTGTTTTCAGAAACTATTGTAAAAGGAGTT
CGAGACAAAGATAAATCTACACTAGAAACTGAAACAGAGAAGAGTCAACTAATTAAGCGG
CCACACAGTTCTTCAACTGAAAGTATACCAACAGAAACGAAATCACCACCGATAAAAACA
AACAAACCAATCAAGTCTGTTCGTTTTATGCTGGGTGCTCCAGATTCAAGCGATGATGAA
AGACCTTCAACACCCGATAAAAATGGTCGTTTGCACAAAATCTTGGAAAGCAAACTTGTG
CGTCACGAAGCTGTTTCTACCACGACACTAAAGCCAACATCGTATGACACAGCTTCTGCA
TTAAGTCCAAGCAAAGAAGAAACAACTGAAGCTACCGCAGATACATTTGATGGTTTACGA
AATGTGGTTGACGATCTTATCACAACTGCTTCTAAAGGAAGAATAATTCCTCCACCACCT
GCGTCGCCCCAAGCAACGTCAGCTGACACCACTCTCAGCCTCCCATTGGTCGGTTCATCC
CCTCAATTGTCCAATCTTATTTCAGTTGCAACAAAGGAAAAAACAACTTCTACTTTAACA
AGAGTCCAGTCATGGAGTCCGTCACTGGGTGGCGCTTCCTTTTCCGTTGCTTCGATGAGA
CGACCGTACACAGCGAGGGGATTCACCTATGCCGAGAAGATTGAGCTGATGAAACAACAG
AATGATTACGACGCAGAATTCATTTCCCAACTAAACAGGAAAACTGCAACTTCATCAGCA
ACAACGACAACAAAATCTCAATTCAGCAACGCAAGCATGAAATCAACAAATGTTTCAACA
TCCGGAAGAAAGGACAGAAAAGGAAGAAGGAAATTCAAAGGTTTCAACAACAATCAACAA
ATCAACAAAGATAAAGACGAATCAAGTTCATCTGATGCAGAAACAAAACAAGCAAAACCT
AATTCCAACAAAAATTGGGATGAAGAACTGTCCAGCCAATCAAACGACAGCGATCACAAT
AGTACTTATTCTGACGAACACCCCCCCACGCTGCTCAACCCTGCGGCTGCTGCTGCTGCA
TACACTGGCTTGCTACGAACTGCAATAATGAGTGGAGCTGGTTTCCCTTCTGTTCCCGTC
AGTGATTATTATGGCTCAGGTGAATGGGCAACTGCTGCCATGGAAACACTGAAAAGCCTC
CAATCAACCATGGACACTAAAAACTTTGAGGAAAAAGTTGAATCAATGCCAAAAGTTGCG
GAAGATTTTCCACCAAACATAAGTGAAAGTATTAAGAAGGAATTCTTGGAAATTGACTTC
GATTCGTTGAATCCACCCATGGACACCATGAGTGATGATCCTTCTTACTTGAGTGATTCC
ACCAATCACACGTCTCGAAAACGATCGAAATCCAACGAACCACAAACCTCGCATCACAAC
GAGAAAGATAACAATCCCGTTTCTCCAAAGCGACACAAACCTGACTCTGACCCAACACTA
GATGTCCTCAGTAAAAACAAAACTCTCGAAAAAATCCGATCGTCTCCGAAAAGACTCTCC
CCGTTGCTAAGCGACAGCGAGAAGAGGATGATCGTTCATCGATCAAAATCGAGCATCTCC
TCCCAACCTCCAAAGATCCGAGAGTCCGGGAGCCTCCTTGCTGCTCATCTTCGAGCAAAG
ACGAGCATGATGGGATCGAAATCGTGTTCCGACCCCGCCCTCAGTTCAAGACTCCTTGAG
AGCAACCCTCTACCGAATAAAAAAGAATCAAAAAAATCCTCGGCAAAATCTTCCAATCAG
CAAGCAGCAGCTGGTGACACGCTTGTTTTCCTCAATGACATCACAATGAAAGACTTCAAC
AACAATGAGTCAACGTTGACGTGGTTTTGTCCGAAAACGAAAATGAATGAAAATAAACTG
ACCAAAGATTCAGCAAAAACTCAGATGAACATGCCAGAAGTTTTCAAAAACTGTGTTGAT
ACCTATATGAAAGTTCGCCTCATTCAAAAGATGCACGTGTGTAAGGTGTGCGGCTTCTCT
ATAGTTGCCACGGACTCTGGAGAGGACGGCGAGAAAATGTTGCAAACCCATGTCATGGAA
CATTCACTTAAAGAGATTTACCAAACTGGAAGTGAAATTGAAAATTGGAAATAAGAAAGT
TTCACCTATCCCAATGGGGACATAACTGAGAAATTTGGTCCTCAGCTGATTTATTTAAGT
TTCCACTGTTATATTAAAACTGCACAATCAGATTTTCCTTGGTTTTGACGTAAAACAGCG
AAAAGAAACAACTTTTTGTTGTGAGAAATCACGTTTGGGTTGATTGCTGTTACTCGTTTC
TACGAAAAGCCTTTTATTGAGTTTTATTTTCCTTACAGTTCCCTTTATGCGCTTTTATTG
CAATGCGTCTGTGATATATTACTTGGATATTTTAATCAGTTAATTTTTATTTCTTATTTA
TTGTGCATTCCAATGCTAGTTACAGTACCCTCCACACAAGAAAATATGTCTTTTTTGTTA
CAGAAATGGCCTCGAATTTTTGAAAAACATTTTTTTTTCAAGCCCAGTCTATTTTTTTTG
CAGATTTCGGAAACAAAAAAGTTGTGTCTATGGGGTTGAAACATATTACTACCTTTTTTA
TTAAAAAGTTTATCAATTCTCATTTTAAAATCGCTTTAATTTAAATCCTGTGCTAAGTTC
TGTTTATACACCCAGTCGATTGTTGTCCCATGGTACCTCACAGAACTGCAAGTTTTGTAT
AAAATCTTCAGACCCTGATCAAATTCAGTACAGTAGCTGAGTAGTTTTGCCGGTTTAATT
TGATTTTCCAAAGTGGTGCTTTTCAACTATCATTGTTTTGTATATTAGCGCTTATACCAG
ACAAAGGTTTTTTCGTTACTGATTTTGTTTAAATGAAAGGAATACAGATCCGACTCT

InterProScan

ProSitePatterns
Znf_C2H2_type (IPR013087) - T[139-161] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value