- Transcript 'KH2012:KH.C1.870.v1....'
Transcript Model
Transcript Id
KH2012:KH.C1.870.v1.A.SL1-1
Possible name(s)
SLC6A14; SLC6A5; SLC6A7
Gene model
Location
KhC1 [4,045,728 / 4,051,059]
Amino acid sequence
Length: 661
>KH.C1.870.v1.A.SL1-1
TVDMGEENKDENQDRGNWDNKADYLLSCIGYAVGLGNVWRFPYLAFENGGGAFLIPYIIM
LVFAGLPIFFMEVALGQFSSLGPTSVWKFNPMFKGVGVCMVVLSAFVGIYYNVIIAYTMF
YFFSSLTSNLPWETCDNWWNDGSICSISFGDVCPSINVSSLTAQEANQIGPFTANLTYDS
TTNLYSQVPKDIAGNIESTLSRNLSTLGCPEFVKGKSRGVSPTEEYWKNYALHQAPNINT
ENTGVPNVNLTLSLIVAWIVVFYSLIRGIKSSGKVVYFTALFPYVVLLILLIRGATLEGA
YDGVQYYIGSQSDLSKLKDANVWKAAATQIFFSLSAAWGGLIALSSYNKFKNNCFFDAVL
VCSVNCATSLFAGFAIFTVLGHMAFKLGKPVNEVVQSSFGLAFVVYPEAIAKLPISPLWA
ILFFLMLFTLGLDSQFTILETVSTAIIDSFPRQLRNRRWQLMLLLSVVMFLLGLVCVTDA
GIYWVDLIDHYAAGWGLLFVAVMELFGVCYIYGGNRFIEDIEMMIGKKNWWFWLYWRACW
FFISPLLLIAILVWSLVTFEPMKYADKTPYPAFATAIGWLIIATALLFIPVYALVSLVKN
KWSLYKASSPAADWGPYIKQFRGTRYANMAEPAEALEIAKGRTDGKDNPNFAEDEIGNTK
L
Nucleotide sequence
Length: 2,470
>KH2012:KH.C1.870.v1.A.SL1-1
TATAAATAATATAGGATTAAAAAGATCTACAAAGTGGACGTGAACTGTAGACATGGGCGA
GGAGAATAAAGACGAAAATCAGGATCGTGGTAACTGGGACAATAAAGCTGACTACTTGTT
GTCATGTATTGGATACGCAGTTGGACTTGGCAATGTATGGCGGTTTCCCTACCTTGCTTT
CGAAAATGGAGGAGGTGCCTTTCTCATTCCATACATTATTATGTTGGTGTTTGCTGGCCT
GCCAATATTTTTCATGGAAGTCGCTCTCGGTCAGTTTTCGAGTCTTGGGCCAACCTCTGT
GTGGAAATTTAACCCAATGTTTAAAGGCGTCGGTGTATGCATGGTTGTCCTGAGTGCGTT
TGTCGGCATTTACTACAACGTGATCATCGCTTATACCATGTTCTACTTTTTCTCATCTTT
AACATCGAATCTACCATGGGAGACTTGTGATAATTGGTGGAACGATGGAAGTATTTGTAG
CATTTCCTTCGGTGACGTATGTCCTTCTATCAACGTATCTAGCCTAACTGCACAAGAAGC
AAACCAAATCGGACCGTTCACAGCTAATCTAACATACGATTCTACAACGAATTTGTATTC
ACAAGTTCCCAAAGACATTGCTGGAAACATTGAAAGCACTCTCAGCAGAAACTTGTCAAC
TTTGGGTTGCCCAGAATTCGTTAAGGGTAAATCACGTGGTGTCAGTCCAACCGAAGAGTA
TTGGAAGAATTACGCACTTCATCAAGCCCCGAATATTAACACAGAAAATACAGGAGTGCC
AAACGTCAACTTAACACTTTCTCTCATAGTCGCCTGGATCGTTGTGTTTTACAGTTTGAT
TCGTGGAATTAAATCTTCTGGAAAGGTCGTTTACTTTACCGCTCTCTTCCCGTACGTGGT
TTTGTTGATTCTGTTGATCAGAGGTGCGACATTGGAAGGTGCTTACGATGGTGTGCAGTA
TTATATTGGAAGCCAATCTGATTTGAGCAAGTTAAAAGATGCGAACGTTTGGAAAGCAGC
AGCTACTCAGATTTTCTTTTCCCTGAGTGCGGCATGGGGTGGTTTGATTGCCCTTTCATC
TTACAACAAGTTCAAGAACAATTGTTTTTTTGATGCGGTACTTGTGTGTTCGGTAAACTG
TGCCACGTCACTCTTTGCTGGTTTTGCAATTTTTACGGTTCTCGGGCACATGGCCTTCAA
ACTCGGAAAACCTGTCAATGAAGTTGTGCAGTCAAGTTTCGGCCTTGCGTTTGTGGTCTA
CCCAGAAGCAATTGCAAAGTTACCAATCTCACCGTTGTGGGCGATTCTCTTCTTCCTCAT
GTTGTTCACCCTTGGCCTCGACAGTCAATTCACAATCCTTGAAACTGTCAGCACAGCAAT
TATCGACAGCTTTCCACGGCAGTTACGTAATAGACGTTGGCAGCTCATGTTACTTCTCTC
CGTCGTTATGTTTCTGCTGGGTCTTGTTTGTGTTACTGACGCTGGAATATACTGGGTAGA
TCTAATCGATCACTACGCTGCTGGTTGGGGATTGCTCTTTGTGGCAGTTATGGAACTTTT
CGGAGTTTGTTACATCTATGGTGGGAATCGTTTCATTGAAGACATCGAAATGATGATCGG
GAAGAAGAATTGGTGGTTCTGGTTGTATTGGAGAGCATGTTGGTTCTTCATATCGCCGTT
GCTGCTTATCGCGATATTGGTTTGGTCATTGGTAACATTTGAGCCAATGAAGTACGCGGA
CAAAACACCATATCCTGCATTCGCCACTGCTATCGGTTGGTTGATCATTGCAACTGCATT
GTTGTTTATTCCAGTTTATGCACTGGTTTCCCTGGTTAAGAACAAGTGGTCTCTGTACAA
GGCGTCCTCGCCGGCAGCGGACTGGGGTCCTTACATCAAACAATTCCGTGGCACCCGCTA
TGCCAACATGGCCGAACCTGCAGAAGCGCTAGAAATAGCAAAGGGACGAACCGATGGCAA
AGACAATCCAAACTTCGCTGAAGATGAAATAGGAAATACAAAACTGTAAAGTAAACCAGT
GGAAGCTCAAATCACCCGATCTACCTATATATCTGTGTAACATAATTACTGTCACCGATC
TGCCATTAGTTTATATTCAACCCGTTCACTGGAAAATGAAAGAATGCTGTATACGGTAGG
GTGGAGGAAGATGGGACACCTTTTCATTTTTACCCTGTCCTATTAGCACTATATATATAT
ATATATATATATATATCTTTACGGTTAAAATTATTCTGGATTTCCAACTTGAAACTTATA
GCAGCCTTTTAAGTTACAATAACAACGAATTAACCACGTAGTTCGCCTTCGTCCATATTG
CAACTTTTCCGCCTTTCTCATTGTATATTTTATATAAATGTTGCAGTCGTGTTTCCGTAC
CATCATGCTAATTTGCTGAAACCTAGTTTTGATTTGTAGTTTTTCAAATAATACATTTAT
AATTAATAGT
| PANTHER |
Na/ntran_symport (IPR000175) - T[9-606] 9.8E-242 |
| ProSiteProfiles |
Na/ntran_symport (IPR000175) - T[14-602] 100.706 |
| Pfam |
Na/ntran_symport (IPR000175) - T[15-146] 1.4E-60 - T[217-599] 3.7E-132 |
| SUPERFAMILY |
SNS_sf (IPR037272) - T[15-144] 1.7E-171 - T[221-597] 1.7E-171 |
| PRINTS |
Na/ntran_symport (IPR000175) - T[23-44] 3.7E-55 - T[52-71] 3.7E-55 - T[95-121] 3.7E-55 - T[413-432] 3.7E-55 - T[494-514] 3.7E-55 - T[537-557] 3.7E-55 |
| ProSitePatterns |
Na/ntran_symport (IPR000175) - T[39-53] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SC6A7_HUMAN | 45.397 % | 513 | 2.28E-175 |
| SC6A5_HUMAN | 47.152 % | 558 | 0 |
| S6A14_HUMAN | 53.858 % | 663 | 0 |
