- Transcript 'KH2012:KH.C7.149.v1....' >
- Transcript 'KH2012:KH.C1.828.v1....'
Transcript Model
Transcript Id
KH2012:KH.C1.828.v1.R.ND2-1
Possible name(s)
AHI1; WDR44; WDR5
Gene model
Location
KhC1 [9,138,476 / 9,156,891]
Amino acid sequence
Length: 947
>KH.C1.828.v1.R.ND2-1
FLYCAKSCQNGYGEINHELKSVYFTAFVVFKRYMMSHCSNSDSDDFFDARPDFGSPKCPS
SPSLVVDDGTNGTTKNKNPNSPCHLGGDLSLDNLLKSATSSTSVVSEDEGSYILNNSSSN
NTDPISHDDSVFLDKHEKFGADNAKLCHHNDSSTIDQSEASTNADQSEFNQPAVSHEGNH
PCTSNDTSLGKRNSSISSSKPDLVASISERPTNLPGVKPALLFTQGKAGCIMWGNAISCV
IYDPLLTPNTTVDNITREFAAALSKVTATNNIDDQQCTHQKEENTNVDIDKPDNINQTPP
TTGMLQYDKFNCSDRQMLKVMTILHGRQWSQMTKNTVLRIDSSPGLEILSTVIVRNLDTG
QTMPLSVAAEQVSQCLNPLALQIMSRTKEFACAGSDDPQPTAPPSSRGIPTPTPADVTPI
NLSEDDNTSIASDDITIGAEASSKKGYNDSGRKIRTKSKRFKRMLGKSARRVKEVAETQV
ERAVHKVKHGKHETTNSESLNVSSDEEVSDSLANSSVKIKASSTNKGPFQFHGLKQVQDI
AVHVGAVWSMKFSHCGRLLATAGQNNVIWVWVLKDYYAYFNEMRSKYISKERGAVFATPP
RNTMEPPTRDPPNIASEDGSSRYESSDQLDEEEEAPFRSLPFSSYVGHSADVLDLAWSKN
YFTLSSSMDKTVRLWHVSQKECLCCFQHIDFVTAISFHPRDDRYFLSGSLDSKLRLWNIP
EKKVALWNEVSPDSSSNSSGGALITTVNFCENGKFAVCGTYDGRCLFYDTEHLKYHTQIH
VRSSRGRNTKGHKITGIEPLPAEHKILVTSNDSRVRLYDLRDLSLTCKYKGLTNMSSQIK
ASFSHDCKYIVCGSEDKSVYIWKTNVPQDVTKFRRDRNDCWESIRAHDAVVTCAIFAPYP
HLMARSDDRTEGSRLSFSSKSRSSPNTDSCCIISADFKGVIKIFMNS
Nucleotide sequence
Length: 3,012
>KH2012:KH.C1.828.v1.R.ND2-1
TTAGATAGTGAAAGAAATTTTAAGCTGAAAACAAATTAGAGATACAGTTAGTACACGTTT
CCAAAAGATTTTAAGGAGCAGTATAGTTTCTCTATTGTGCAAAATCGTGTCAAAATGGAT
ATGGCGAAATAAATCACGAACTAAAAAGCGTCTATTTCACTGCTTTTGTTGTTTTCAAGC
GTTATATGATGTCGCACTGCAGTAACAGCGATTCTGACGATTTTTTCGATGCAAGACCAG
ACTTTGGGTCTCCAAAATGCCCTTCTTCCCCTTCATTAGTTGTAGATGATGGGACAAATG
GAACAACCAAGAATAAAAACCCTAACTCTCCGTGTCATCTTGGTGGTGATTTATCGCTCG
ATAATCTTCTAAAGTCGGCCACATCCAGTACGTCAGTTGTATCAGAGGATGAAGGTTCTT
ATATATTGAACAACAGCAGTAGCAACAATACAGATCCCATCAGCCACGACGACAGTGTTT
TTCTGGATAAGCATGAAAAATTTGGTGCAGACAATGCTAAGTTATGTCATCACAATGATT
CAAGTACCATTGACCAATCAGAGGCAAGCACGAATGCTGACCAATCAGAATTCAACCAGC
CTGCTGTATCGCATGAGGGGAACCACCCATGTACCAGTAATGACACCTCACTGGGTAAAA
GAAACTCGTCGATATCAAGCAGCAAACCTGACCTGGTGGCTTCTATAAGTGAAAGACCAA
CAAATCTTCCTGGTGTTAAACCTGCTCTACTATTTACACAAGGTAAAGCTGGTTGTATTA
TGTGGGGTAATGCTATATCATGTGTTATTTACGACCCTTTACTCACCCCCAACACTACTG
TCGACAACATCACACGGGAGTTTGCAGCAGCCCTATCAAAAGTGACAGCAACAAACAACA
TTGATGACCAACAATGCACACATCAGAAGGAGGAAAATACCAACGTTGACATTGATAAAC
CTGATAATATTAACCAAACACCACCCACCACAGGTATGCTACAATATGATAAATTTAACT
GCAGCGATAGGCAAATGCTGAAGGTAATGACCATTTTACACGGCAGGCAATGGTCACAAA
TGACAAAGAACACTGTATTAAGGATAGATTCATCCCCGGGACTTGAGATCTTGTCGACTG
TGATCGTTCGTAATTTGGACACGGGGCAAACTATGCCACTGAGTGTCGCTGCAGAGCAGG
TGTCCCAGTGTCTCAACCCCCTTGCATTACAAATCATGAGTCGTACCAAGGAATTTGCGT
GTGCTGGGTCCGATGACCCCCAACCCACTGCCCCACCCTCATCAAGGGGAATACCCACCC
CAACCCCTGCTGATGTTACCCCAATTAATTTATCGGAAGACGACAACACCTCTATAGCTA
GCGATGATATCACTATAGGAGCTGAAGCTTCGTCAAAGAAAGGTTACAACGACAGTGGGC
GAAAAATACGAACTAAAAGTAAAAGATTTAAACGAATGTTGGGGAAAAGTGCAAGGAGAG
TTAAAGAGGTTGCCGAAACACAAGTTGAACGTGCTGTACACAAAGTAAAACACGGTAAAC
ACGAAACAACCAACAGTGAGTCGCTCAATGTTTCAAGCGATGAAGAAGTTTCAGACTCGC
TCGCAAACTCCTCAGTTAAAATAAAAGCTTCTTCCACTAATAAAGGACCTTTCCAGTTCC
ATGGTTTGAAACAAGTACAGGATATAGCAGTTCATGTGGGCGCAGTATGGAGCATGAAGT
TTAGTCACTGTGGTCGTCTCCTCGCAACAGCGGGTCAGAACAACGTGATATGGGTTTGGG
TGTTGAAGGATTATTATGCTTACTTTAATGAGATGAGAAGCAAGTATATAAGCAAAGAGC
GAGGTGCTGTGTTCGCTACCCCTCCCCGCAACACCATGGAACCCCCGACTCGTGACCCCC
CCAACATCGCATCGGAAGATGGAAGCTCGAGGTACGAGAGTTCGGATCAATTAGATGAAG
AAGAGGAAGCTCCGTTTCGATCGCTTCCGTTCTCATCTTATGTCGGACACAGCGCCGATG
TTCTTGACCTTGCGTGGTCTAAGAATTACTTTACTCTGTCTTCATCTATGGACAAGACTG
TTCGTTTATGGCACGTCTCACAAAAGGAATGTTTATGTTGCTTCCAACATATTGATTTTG
TTACCGCGATATCATTTCATCCAAGGGACGACAGATACTTCCTAAGTGGTTCGTTGGACA
GTAAGTTACGCTTGTGGAATATTCCTGAAAAGAAGGTTGCTTTGTGGAATGAAGTTTCTC
CAGATTCCTCATCAAATTCATCAGGAGGAGCGCTCATCACAACTGTCAACTTTTGTGAGA
ATGGAAAGTTTGCCGTTTGTGGAACTTATGATGGGAGGTGTTTGTTCTATGATACTGAGC
ACTTGAAGTATCACACCCAGATTCATGTTCGTTCATCGCGTGGTAGGAATACAAAGGGAC
ATAAGATAACTGGAATTGAACCTTTGCCTGCCGAGCACAAGATACTGGTGACCTCTAATG
ATTCTCGTGTCCGACTTTATGATTTAAGGGATTTATCACTGACTTGCAAATATAAAGGAC
TCACAAATATGAGTAGCCAAATCAAAGCAAGCTTTAGCCATGATTGCAAATACATTGTTT
GCGGTTCTGAAGATAAATCAGTTTATATTTGGAAAACAAATGTTCCTCAAGATGTGACAA
AGTTTCGAAGAGATAGAAATGATTGTTGGGAAAGTATACGAGCTCATGACGCCGTGGTAA
CTTGTGCCATATTTGCTCCTTACCCCCACCTAATGGCTCGAAGTGACGACAGAACTGAAG
GAAGTCGATTGTCGTTCTCGTCAAAATCACGCTCTTCACCGAACACAGACAGTTGCTGCA
TTATATCAGCGGACTTTAAAGGAGTCATAAAAATCTTCATGAATTCTTAGCATATTTCTA
TGATTTTCGTCAAATTTCTATTATTTATCATTATTATTATGTAATAATCAAAATCAAAAT
ACAAAAACTTTT
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[532-575] 5.0E-52 - T[639-906] 5.0E-52 |
| SMART |
WD40_repeat (IPR001680) - T[533-572] 1.3E-4 - T[638-676] 6.7E-5 - T[679-718] 9.0E-8 - T[729-769] 12.0 - T[777-819] 29.0 - T[822-863] 0.19 - T[877-945] 30.0 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[540-571] 9.406 - T[645-678] 11.077 - T[685-719] 11.11 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[540-581] 8.756 - T[645-872] 17.798 |
| Pfam |
WD40_repeat (IPR001680) - T[642-675] 9.8E-5 - T[681-718] 0.0096 - T[842-863] 0.012 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| WDR5_HUMAN | 28.139 % | 82.8 | 7.73E-17 |
| WDR5B_HUMAN | 27.138 % | 79.3 | 8.49E-16 |
| WDR44_HUMAN | 51.55 % | 598 | 0 |