- Transcript 'KH2012:KH.C1.828.v1....' >
- Transcript 'KH2012:KH.C1.828.v1....'
Transcript Model
Transcript Id
KH2012:KH.C1.828.v1.A.SL1-1
Possible name(s)
AHI1; WDR44; WDR5
Gene model
Location
KhC1 [9,138,476 / 9,156,712]
Amino acid sequence
Length: 916
>KH.C1.828.v1.A.SL1-1
RYMMSHCSNSDSDDFFDARPDFGSPKCPSSPSLVVDDGTNGTTKNKNPNSPCHLGGDLSL
DNLLKSATSSTSVVSEDEGSYILNNSSSNNTDPISHDDSVFLDKHEKFGADNAKLCHHND
SSTIDQSEASTNADQSEFNQPAVSHEGNHPCTSNDTSLGKRNSSISSSKPDLVASISERP
TNLPGVKPALLFTQGKAGCIMWGNAISCVIYDPLLTPNTTVDNITREFAAALSKVTATNN
IDDQQCTHQKEENTNVDIDKPDNINQTPPTTGMLQYDKFNCSDRQMLKVMTILHGRQWSQ
MTKNTVLRIDSSPGLEILSTVIVRNLDTGQTMPLSVAAEQVSQCLNPLALQIMSRTKEFA
CAGSDDPQPTAPPSSRGIPTPTPADVTPINLSEDDNTSIASDDITIGAEASSKKGYNDSG
RKIRTKSKRFKRMLGKSARRVKEVAETQVERAVHKVKHGKHETTNSESLNVSSDEEVSDS
LANSSVKIKASSTNKGPFQFHGLKQVQDIAVHVGAVWSMKFSHCGRLLATAGQNNVIWVW
VLKDYYAYFNEMRSKYISKERGAVFATPPRNTMEPPTRDPPNIASEDGSSRYESSDQLDE
EEEAPFRSLPFSSYVGHSADVLDLAWSKNYFTLSSSMDKTVRLWHVSQKECLCCFQHIDF
VTAISFHPRDDRYFLSGSLDSKLRLWNIPEKKVALWNEVSPDSSSNSSGGALITTVNFCE
NGKFAVCGTYDGRCLFYDTEHLKYHTQIHVRSSRGRNTKGHKITGIEPLPAEHKILVTSN
DSRVRLYDLRDLSLTCKYKGLTNMSSQIKASFSHDCKYIVCGSEDKSVYIWKTNVPQDVT
KFRRDRNDCWESIRAHDAVVTCAIFAPYPHLMARSDDRTEGSRLSFSSKSRSSPNTDSCC
IISADFKGVIKIFMNS
Nucleotide sequence
Length: 2,833
>KH2012:KH.C1.828.v1.A.SL1-1
CGTTATATGATGTCGCACTGCAGTAACAGCGATTCTGACGATTTTTTCGATGCAAGACCA
GACTTTGGGTCTCCAAAATGCCCTTCTTCCCCTTCATTAGTTGTAGATGATGGGACAAAT
GGAACAACCAAGAATAAAAACCCTAACTCTCCGTGTCATCTTGGTGGTGATTTATCGCTC
GATAATCTTCTAAAGTCGGCCACATCCAGTACGTCAGTTGTATCAGAGGATGAAGGTTCT
TATATATTGAACAACAGCAGTAGCAACAATACAGATCCCATCAGCCACGACGACAGTGTT
TTTCTGGATAAGCATGAAAAATTTGGTGCAGACAATGCTAAGTTATGTCATCACAATGAT
TCAAGTACCATTGACCAATCAGAGGCAAGCACGAATGCTGACCAATCAGAATTCAACCAG
CCTGCTGTATCGCATGAGGGGAACCACCCATGTACCAGTAATGACACCTCACTGGGTAAA
AGAAACTCGTCGATATCAAGCAGCAAACCTGACCTGGTGGCTTCTATAAGTGAAAGACCA
ACAAATCTTCCTGGTGTTAAACCTGCTCTACTATTTACACAAGGTAAAGCTGGTTGTATT
ATGTGGGGTAATGCTATATCATGTGTTATTTACGACCCTTTACTCACCCCCAACACTACT
GTCGACAACATCACACGGGAGTTTGCAGCAGCCCTATCAAAAGTGACAGCAACAAACAAC
ATTGATGACCAACAATGCACACATCAGAAGGAGGAAAATACCAACGTTGACATTGATAAA
CCTGATAATATTAACCAAACACCACCCACCACAGGTATGCTACAATATGATAAATTTAAC
TGCAGCGATAGGCAAATGCTGAAGGTAATGACCATTTTACACGGCAGGCAATGGTCACAA
ATGACAAAGAACACTGTATTAAGGATAGATTCATCCCCGGGACTTGAGATCTTGTCGACT
GTGATCGTTCGTAATTTGGACACGGGGCAAACTATGCCACTGAGTGTCGCTGCAGAGCAG
GTGTCCCAGTGTCTCAACCCCCTTGCATTACAAATCATGAGTCGTACCAAGGAATTTGCG
TGTGCTGGGTCCGATGACCCCCAACCCACTGCCCCACCCTCATCAAGGGGAATACCCACC
CCAACCCCTGCTGATGTTACCCCAATTAATTTATCGGAAGACGACAACACCTCTATAGCT
AGCGATGATATCACTATAGGAGCTGAAGCTTCGTCAAAGAAAGGTTACAACGACAGTGGG
CGAAAAATACGAACTAAAAGTAAAAGATTTAAACGAATGTTGGGGAAAAGTGCAAGGAGA
GTTAAAGAGGTTGCCGAAACACAAGTTGAACGTGCTGTACACAAAGTAAAACACGGTAAA
CACGAAACAACCAACAGTGAGTCGCTCAATGTTTCAAGCGATGAAGAAGTTTCAGACTCG
CTCGCAAACTCCTCAGTTAAAATAAAAGCTTCTTCCACTAATAAAGGACCTTTCCAGTTC
CATGGTTTGAAACAAGTACAGGATATAGCAGTTCATGTGGGCGCAGTATGGAGCATGAAG
TTTAGTCACTGTGGTCGTCTCCTCGCAACAGCGGGTCAGAACAACGTGATATGGGTTTGG
GTGTTGAAGGATTATTATGCTTACTTTAATGAGATGAGAAGCAAGTATATAAGCAAAGAG
CGAGGTGCTGTGTTCGCTACCCCTCCCCGCAACACCATGGAACCCCCGACTCGTGACCCC
CCCAACATCGCATCGGAAGATGGAAGCTCGAGGTACGAGAGTTCGGATCAATTAGATGAA
GAAGAGGAAGCTCCGTTTCGATCGCTTCCGTTCTCATCTTATGTCGGACACAGCGCCGAT
GTTCTTGACCTTGCGTGGTCTAAGAATTACTTTACTCTGTCTTCATCTATGGACAAGACT
GTTCGTTTATGGCACGTCTCACAAAAGGAATGTTTATGTTGCTTCCAACATATTGATTTT
GTTACCGCGATATCATTTCATCCAAGGGACGACAGATACTTCCTAAGTGGTTCGTTGGAC
AGTAAGTTACGCTTGTGGAATATTCCTGAAAAGAAGGTTGCTTTGTGGAATGAAGTTTCT
CCAGATTCCTCATCAAATTCATCAGGAGGAGCGCTCATCACAACTGTCAACTTTTGTGAG
AATGGAAAGTTTGCCGTTTGTGGAACTTATGATGGGAGGTGTTTGTTCTATGATACTGAG
CACTTGAAGTATCACACCCAGATTCATGTTCGTTCATCGCGTGGTAGGAATACAAAGGGA
CATAAGATAACTGGAATTGAACCTTTGCCTGCCGAGCACAAGATACTGGTGACCTCTAAT
GATTCTCGTGTCCGACTTTATGATTTAAGGGATTTATCACTGACTTGCAAATATAAAGGA
CTCACAAATATGAGTAGCCAAATCAAAGCAAGCTTTAGCCATGATTGCAAATACATTGTT
TGCGGTTCTGAAGATAAATCAGTTTATATTTGGAAAACAAATGTTCCTCAAGATGTGACA
AAGTTTCGAAGAGATAGAAATGATTGTTGGGAAAGTATACGAGCTCATGACGCCGTGGTA
ACTTGTGCCATATTTGCTCCTTACCCCCACCTAATGGCTCGAAGTGACGACAGAACTGAA
GGAAGTCGATTGTCGTTCTCGTCAAAATCACGCTCTTCACCGAACACAGACAGTTGCTGC
ATTATATCAGCGGACTTTAAAGGAGTCATAAAAATCTTCATGAATTCTTAGCATATTTCT
ATGATTTTCGTCAAATTTCTATTATTTATCATTATTATTATGTAATAATCAAAATCAAAA
TACAAAAACTTTT
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[501-544] 5.13E-52 - T[608-875] 5.13E-52 |
| SMART |
WD40_repeat (IPR001680) - T[502-541] 1.3E-4 - T[607-645] 6.7E-5 - T[648-687] 9.0E-8 - T[698-738] 12.0 - T[746-788] 29.0 - T[791-832] 0.19 - T[846-914] 30.0 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[509-550] 8.756 - T[614-841] 17.798 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[509-540] 9.406 - T[614-647] 11.077 - T[654-688] 11.11 |
| Pfam |
WD40_repeat (IPR001680) - T[611-644] 9.4E-5 - T[650-687] 0.0093 - T[811-832] 0.011 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| WDR5_HUMAN | 28.139 % | 82.8 | 7.61E-17 |
| WDR5B_HUMAN | 27.138 % | 79.3 | 9.24E-16 |
| WDR44_HUMAN | 51.948 % | 600 | 0 |