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  1. Transcript 'KH2012:KH.C1.777.v2....'

Transcript Model

Transcript Id

KH2012:KH.C1.777.v2.R.ND2-1

Possible name(s)

ZEB1; ZEB2; ZNF22

Location

KhC1 [10,017,393 / 10,032,348]

Sequences

Amino acid sequence

Length: 1,010

>KH.C1.777.v2.R.ND2-1
FLNIFFAIFPPMFHSKITSQSESCYFGSFRWSRKKKVLKFFLREVCKVCGKAFINIYRLQ
RHMLTHNAGNRKFSCDTCGKAFKYKHHLKEHSRIHSGEKPYMCPNPRCMKRFSHSGSYSS
HVSSKKCINSSRMELSRHQNSSVTSPYGFVTSKREWNEGQPDESSLEKDGNNSIMMQLVE
NTSVIDNEETRKRDEGQRMEDDDWSVIEKESFTISKENEVQTSQQTFITSRGDFISDENA
SGTVKDNNNNPLDTPSYHNSGTESSGSSSSENLNSLKLLRHKIVTSNYPDVITSTAASSE
SNFGNWNDSLRGQDSFTARRIMKTSPISENNTQEPFGKQQQRHRLDQNILQELKGSADNV
TNKSYVMNNFLSSVQANGDRPWIPNLFDEKSLSPRHNTEPTSPPRSVTTSSHSYDVTKRY
RDAWSNSNSNNSNIAPYNFMLQQQIMQAALANAASGRVPMMQPSVLQQALAIVSANNWNM
EKTENRTEVPAMEKRRDSGNHANNPQNEPLDLSAKKRNERVSESGIPSSAVMTTPNTAVQ
AFQQMIRNNAMSSNAFTSLFPGGIPLSPQTLTSPAALSPPIPPEVLYAQQLQHYLSSGLY
PLDGANVLRNQMNQSAASNFSVKRGRPKKRSFGDANSPNRLNPNKQFLYDSMPTRRGPPF
SERDIGFSLSGPRQNGDRLSAAVPHISPMPTDMPYKCDICDKSFQKQSSLTRHKYEHTGK
RPHHCNECGKSFKHKHHLIEHQRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYAYCKPE
DAIMQELRQQMKKNGDVTSPSPNVAPKQKKRRTSPQSPYNAEAPQTGNSPSRNHLPSFFG
GFFGKDAIETPLTKASVSDETPAAIYEKLMLQAQEKLRISSIYSGSSSHDLTSDPNSSGD
EKSVKRSKTESPVKKDFEESATPSEDNNSIKQSQGGASPFNSTSPRKSSEDKKTNFISAS
DVTISPSTSPSHSIMSSSPQEMSIIAPEDSQVTLKGSASFLHIPVAADLS

Nucleotide sequence

Length: 4,152

>KH2012:KH.C1.777.v2.R.ND2-1
ATCACATCATAATGCTTCAGTTTCACGCATGAATGGCTTTTATCGCAGAAATCAGTCAAG
CGTTTCATATTTCACCTGATCAGTATATTGTGACGTCAGAAAGCAGATTATTTTCATTGC
AGCAGTTTTTGAGTCGTCGTTTCATTTTTCGTGATCCGCCAAACATAGATTCAATCACGT
AACTTTCATTTTTCTCGTTTTTATTTTCTTTATTGCTTTTCCTTTTTCATTTTCGCATAA
AAATCGAACAAAAATATAAAATATAAAACCACTTCAAAAAATTGCATGCTAGTTTTTAAA
TATTTTTTTCGCCATTTTCCCGCCAATGTTTCATTCGAAAATAACCAGCCAATCAGAAAG
CTGCTATTTTGGTTCTTTTCGTTGGAGCAGAAAAAAGAAAGTTTTGAAGTTTTTTCTTCG
AGAGGTTTGCAAAGTTTGCGGCAAAGCTTTCATCAACATTTATCGCCTACAACGTCATAT
GCTGACGCACAATGCAGGAAATCGTAAGTTTAGTTGTGACACGTGCGGCAAAGCTTTCAA
ATACAAACATCATCTGAAGGAACATAGTCGAATCCATAGCGGCGAAAAGCCGTACATGTG
CCCGAATCCACGTTGCATGAAAAGGTTTTCGCATTCTGGCTCATACAGCTCACATGTAAG
CAGCAAGAAATGCATCAACTCATCAAGAATGGAATTATCACGTCATCAAAACTCGTCTGT
GACGTCACCATATGGCTTTGTGACGTCGAAACGTGAATGGAATGAAGGACAACCGGACGA
GTCCAGTTTGGAAAAGGATGGAAATAATAGCATAATGATGCAGCTTGTGGAAAACACGAG
CGTTATCGATAATGAAGAAACGCGGAAGCGCGATGAAGGTCAGAGAATGGAAGACGACGA
TTGGTCAGTGATTGAGAAAGAATCTTTCACGATTTCGAAGGAAAACGAAGTTCAAACGTC
ACAACAAACGTTTATTACGTCACGAGGGGATTTTATCTCGGACGAAAACGCGAGTGGAAC
CGTCAAGGACAACAACAACAATCCACTGGACACCCCGTCATATCACAACTCTGGAACAGA
AAGCTCAGGCTCATCGAGCTCCGAAAACTTGAATAGTTTAAAACTGTTACGTCATAAAAT
TGTGACGTCAAATTACCCTGACGTCATTACATCGACCGCGGCATCCAGCGAATCCAATTT
TGGGAATTGGAACGACTCACTGCGGGGACAAGACTCTTTTACCGCCCGCCGAATAATGAA
AACCAGCCCAATCTCCGAAAACAACACCCAGGAACCGTTTGGCAAGCAGCAGCAGCGACA
TCGTCTGGACCAAAATATTCTCCAAGAGCTGAAAGGATCGGCTGATAACGTCACAAACAA
AAGTTACGTCATGAATAACTTTCTCAGCAGTGTACAAGCAAATGGGGACCGACCTTGGAT
CCCGAACCTGTTTGACGAAAAGTCGCTCTCACCACGTCACAATACCGAGCCTACGTCACC
GCCAAGATCTGTTACTACGTCATCACATAGTTATGACGTCACAAAAAGATACCGTGACGC
ATGGAGCAACAGCAACAGCAATAACTCAAACATAGCTCCGTACAACTTTATGCTGCAACA
ACAAATCATGCAAGCAGCGCTCGCTAACGCCGCAAGTGGCAGAGTGCCAATGATGCAACC
CAGTGTTCTACAACAGGCGCTCGCGATTGTATCGGCCAACAATTGGAACATGGAAAAGAC
GGAAAACCGCACGGAAGTTCCGGCCATGGAAAAACGACGGGATTCAGGAAACCACGCCAA
CAATCCTCAAAACGAACCGTTGGATCTTTCAGCTAAGAAAAGAAACGAACGAGTTTCGGA
ATCCGGTATCCCTTCTTCAGCTGTAATGACGACACCCAACACTGCAGTTCAAGCATTTCA
GCAGATGATCCGTAACAATGCAATGTCATCGAATGCGTTCACGAGCCTCTTTCCCGGTGG
AATCCCACTAAGTCCACAAACACTGACCAGCCCAGCCGCCTTATCGCCGCCAATACCCCC
CGAAGTATTGTACGCACAACAGCTACAGCATTATCTATCCTCTGGATTGTACCCGTTAGA
TGGCGCCAATGTTTTACGAAATCAAATGAACCAATCAGCTGCAAGCAACTTCTCGGTCAA
GCGAGGTCGGCCAAAGAAGAGGTCGTTTGGAGATGCCAACTCGCCAAATCGCCTCAATCC
GAACAAACAGTTTCTGTACGACTCCATGCCAACTCGACGTGGGCCGCCATTTTCCGAGCG
AGACATCGGCTTCTCACTGTCTGGTCCGCGGCAAAATGGCGACCGACTTTCGGCGGCAGT
ACCTCATATTTCCCCGATGCCAACAGACATGCCGTACAAGTGTGACATCTGCGACAAGTC
ATTCCAAAAACAAAGCTCCCTTACAAGACATAAATATGAACACACAGGCAAAAGACCCCA
CCATTGCAACGAATGCGGGAAGTCGTTTAAACACAAACATCATCTTATTGAACATCAGCG
GCTTCATAGCGGGGAAAAGCCGTATCAGTGCGATAAATGCGGGAAGCGCTTTTCACATTC
CGGCTCGTACTCCCAACATATGAACCATAGATATGCTTATTGCAAGCCAGAAGATGCGAT
AATGCAAGAATTACGTCAGCAGATGAAAAAGAACGGTGACGTCACATCACCAAGTCCAAA
CGTAGCCCCAAAGCAGAAAAAACGAAGGACTTCCCCACAATCTCCATACAACGCAGAGGC
TCCCCAAACCGGGAATTCCCCATCGCGTAACCACTTGCCTTCTTTCTTCGGTGGATTCTT
CGGGAAAGACGCGATAGAGACTCCGCTAACAAAGGCTTCTGTTTCCGACGAAACACCGGC
TGCAATCTATGAAAAGTTGATGCTACAAGCACAAGAGAAACTTCGCATATCCAGTATTTA
TTCAGGAAGTTCTTCACACGACCTAACCAGCGACCCTAACAGTAGCGGAGATGAAAAATC
TGTGAAACGAAGCAAGACTGAGTCCCCAGTCAAAAAAGATTTTGAAGAGTCAGCGACACC
AAGCGAGGACAATAACTCGATTAAACAGTCGCAAGGTGGCGCGTCACCTTTTAATTCTAC
TTCACCTCGCAAATCAAGCGAAGACAAGAAAACAAATTTCATTTCTGCCTCTGACGTCAC
AATTTCACCTTCTACGTCACCATCACATTCTATTATGTCGTCATCGCCGCAAGAAATGTC
GATAATTGCGCCGGAAGACAGCCAAGTCACGCTGAAAGGTTCTGCTTCATTTCTTCACAT
TCCAGTTGCCGCTGACCTTTCATGAAAGGTCATGATGCATGGTCCCTACGTCATGGTTAT
GACGTTTTCACTTCATGCTTTATATTCGTGAATATTATTTGTTCTTAGTACGACGCCTTT
GTTTTCTTCAACATTTCGTTTCTTCATCCCCTCGCGCGCGCTGTACATATTGTTACGTCA
TAATTTTCGTGCTGCCTAATTTCTTCACTGTTCGCCTACGTCATCCGAATTGCGTCATCA
CTAATTACGTCACTGCGTTCATATTCTTCACTAATTCCGGCTTGCCTTTTTTATTACGTC
ATACGCGCGTCAACCAAGTGCCTATTTGCGCAGGGGAACCCCCATTCTTGCATGACGTCA
CATATAATCGAGCACTGTTTCGTCACACTTGCCGTACGTTCACGCCGCTTCATGTATTGC
ATGGGATTTTCGGATTGTTTTTTTGCACCCCGTTTTTGTTCACCTTGCGCAGATTTTGTT
GCAGAACTTTTAGAGTTGCAATTTTTTTCCTTGCGGATCTCTCGATTAAGTTGCAATTAT
TACGATACGCAGATAATGCGAAAGATCATAGTACGTTTCTTTGTTGATGCAATATTTTTT
TTTGTATTTTGATGTCACACACAGCATTCCTGAACAATAAGAAACAAACAATCAAACGTC
ATAAAGGAACATTGTTAATCAAATTGACATTTTATATAAGTGTACCAACATTTGGAAAAA
AGTGACATTTGGTGCTGCTTGCTGATAATATTGTGACAAATTTGTAAATACTGAAACTTG
GGCCAAGATTTTACATTATTTCTATTGTACCAGATCATGCATATTTACCGCACAATAAAA
AGAACTAACAGG

InterProScan

ProSiteProfiles
Znf_C2H2_type (IPR013087) - T[44-71] 10.076 - T[73-100] 17.267 - T[695-722] 15.708 - T[723-750] 17.225 - T[751-779] 11.24
SMART
Znf_C2H2_type (IPR013087) - T[44-66] 0.0049 - T[73-95] 0.012 - T[101-123] 180.0 - T[695-717] 5.1E-4 - T[723-745] 0.06 - T[751-772] 0.21
SUPERFAMILY
Znf_C2H2_sf (IPR036236) - T[69-121] 1.77E-11 - T[685-732] 1.76E-12 - T[717-769] 2.11E-16
ProSitePatterns
Znf_C2H2_type (IPR013087) - T[75-95] . - T[697-717] . - T[725-745] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ZEB2_HUMAN 85.714 % 173 6.59E-44
ZEB1_HUMAN 84.884 % 175 1.36E-44
ZNF22_HUMAN 48.913 % 100 1.05E-23