- Transcript 'Boleac.CG.SB_v3.S152...' >
- Transcript 'KH2012:KH.C1.777.v2....'
Transcript Model
Transcript Id
KH2012:KH.C1.777.v2.A.nonSL3-1
Possible name(s)
ZEB1; ZEB2; ZNF22
Gene model
Location
KhC1 [10,017,370 / 10,032,348]
Amino acid sequence
Length: 1,010
>KH.C1.777.v2.A.nonSL3-1
FLNIFFAIFPPMFHSKITSQSESCYFGSFRWSRKKKVLKFFLREVCKVCGKAFINIYRLQ
RHMLTHNAGNRKFSCDTCGKAFKYKHHLKEHSRIHSGEKPYMCPNPRCMKRFSHSGSYSS
HVSSKKCINSSRMELSRHQNSSVTSPYGFVTSKREWNEGQPDESSLEKDGNNSIMMQLVE
NTSVIDNEETRKRDEGQRMEDDDWSVIEKESFTISKENEVQTSQQTFITSRGDFISDENA
SGTVKDNNNNPLDTPSYHNSGTESSGSSSSENLNSLKLLRHKIVTSNYPDVITSTAASSE
SNFGNWNDSLRGQDSFTARRIMKTSPISENNTQEPFGKQQQRHRLDQNILQELKGSADNV
TNKSYVMNNFLSSVQANGDRPWIPNLFDEKSLSPRHNTEPTSPPRSVTTSSHSYDVTKRY
RDAWSNSNSNNSNIAPYNFMLQQQIMQAALANAASGRVPMMQPSVLQQALAIVSANNWNM
EKTENRTEVPAMEKRRDSGNHANNPQNEPLDLSAKKRNERVSESGIPSSAVMTTPNTAVQ
AFQQMIRNNAMSSNAFTSLFPGGIPLSPQTLTSPAALSPPIPPEVLYAQQLQHYLSSGLY
PLDGANVLRNQMNQSAASNFSVKRGRPKKRSFGDANSPNRLNPNKQFLYDSMPTRRGPPF
SERDIGFSLSGPRQNGDRLSAAVPHISPMPTDMPYKCDICDKSFQKQSSLTRHKYEHTGK
RPHHCNECGKSFKHKHHLIEHQRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYAYCKPE
DAIMQELRQQMKKNGDVTSPSPNVAPKQKKRRTSPQSPYNAEAPQTGNSPSRNHLPSFFG
GFFGKDAIETPLTKASVSDETPAAIYEKLMLQAQEKLRISSIYSGSSSHDLTSDPNSSGD
EKSVKRSKTESPVKKDFEESATPSEDNNSIKQSQGGASPFNSTSPRKSSEDKKTNFISAS
DVTISPSTSPSHSIMSSSPQEMSIIAPEDSQVTLKGSASFLHIPVAADLS
Nucleotide sequence
Length: 4,175
>KH2012:KH.C1.777.v2.A.nonSL3-1
ATTCGCATGTAACAATCGCTGGTATCACATCATAATGCTTCAGTTTCACGCATGAATGGC
TTTTATCGCAGAAATCAGTCAAGCGTTTCATATTTCACCTGATCAGTATATTGTGACGTC
AGAAAGCAGATTATTTTCATTGCAGCAGTTTTTGAGTCGTCGTTTCATTTTTCGTGATCC
GCCAAACATAGATTCAATCACGTAACTTTCATTTTTCTCGTTTTTATTTTCTTTATTGCT
TTTCCTTTTTCATTTTCGCATAAAAATCGAACAAAAATATAAAATATAAAACCACTTCAA
AAAATTGCATGCTAGTTTTTAAATATTTTTTTCGCCATTTTCCCGCCAATGTTTCATTCG
AAAATAACCAGCCAATCAGAAAGCTGCTATTTTGGTTCTTTTCGTTGGAGCAGAAAAAAG
AAAGTTTTGAAGTTTTTTCTTCGAGAGGTTTGCAAAGTTTGCGGCAAAGCTTTCATCAAC
ATTTATCGCCTACAACGTCATATGCTGACGCACAATGCAGGAAATCGTAAGTTTAGTTGT
GACACGTGCGGCAAAGCTTTCAAATACAAACATCATCTGAAGGAACATAGTCGAATCCAT
AGCGGCGAAAAGCCGTACATGTGCCCGAATCCACGTTGCATGAAAAGGTTTTCGCATTCT
GGCTCATACAGCTCACATGTAAGCAGCAAGAAATGCATCAACTCATCAAGAATGGAATTA
TCACGTCATCAAAACTCGTCTGTGACGTCACCATATGGCTTTGTGACGTCGAAACGTGAA
TGGAATGAAGGACAACCGGACGAGTCCAGTTTGGAAAAGGATGGAAATAATAGCATAATG
ATGCAGCTTGTGGAAAACACGAGCGTTATCGATAATGAAGAAACGCGGAAGCGCGATGAA
GGTCAGAGAATGGAAGACGACGATTGGTCAGTGATTGAGAAAGAATCTTTCACGATTTCG
AAGGAAAACGAAGTTCAAACGTCACAACAAACGTTTATTACGTCACGAGGGGATTTTATC
TCGGACGAAAACGCGAGTGGAACCGTCAAGGACAACAACAACAATCCACTGGACACCCCG
TCATATCACAACTCTGGAACAGAAAGCTCAGGCTCATCGAGCTCCGAAAACTTGAATAGT
TTAAAACTGTTACGTCATAAAATTGTGACGTCAAATTACCCTGACGTCATTACATCGACC
GCGGCATCCAGCGAATCCAATTTTGGGAATTGGAACGACTCACTGCGGGGACAAGACTCT
TTTACCGCCCGCCGAATAATGAAAACCAGCCCAATCTCCGAAAACAACACCCAGGAACCG
TTTGGCAAGCAGCAGCAGCGACATCGTCTGGACCAAAATATTCTCCAAGAGCTGAAAGGA
TCGGCTGATAACGTCACAAACAAAAGTTACGTCATGAATAACTTTCTCAGCAGTGTACAA
GCAAATGGGGACCGACCTTGGATCCCGAACCTGTTTGACGAAAAGTCGCTCTCACCACGT
CACAATACCGAGCCTACGTCACCGCCAAGATCTGTTACTACGTCATCACATAGTTATGAC
GTCACAAAAAGATACCGTGACGCATGGAGCAACAGCAACAGCAATAACTCAAACATAGCT
CCGTACAACTTTATGCTGCAACAACAAATCATGCAAGCAGCGCTCGCTAACGCCGCAAGT
GGCAGAGTGCCAATGATGCAACCCAGTGTTCTACAACAGGCGCTCGCGATTGTATCGGCC
AACAATTGGAACATGGAAAAGACGGAAAACCGCACGGAAGTTCCGGCCATGGAAAAACGA
CGGGATTCAGGAAACCACGCCAACAATCCTCAAAACGAACCGTTGGATCTTTCAGCTAAG
AAAAGAAACGAACGAGTTTCGGAATCCGGTATCCCTTCTTCAGCTGTAATGACGACACCC
AACACTGCAGTTCAAGCATTTCAGCAGATGATCCGTAACAATGCAATGTCATCGAATGCG
TTCACGAGCCTCTTTCCCGGTGGAATCCCACTAAGTCCACAAACACTGACCAGCCCAGCC
GCCTTATCGCCGCCAATACCCCCCGAAGTATTGTACGCACAACAGCTACAGCATTATCTA
TCCTCTGGATTGTACCCGTTAGATGGCGCCAATGTTTTACGAAATCAAATGAACCAATCA
GCTGCAAGCAACTTCTCGGTCAAGCGAGGTCGGCCAAAGAAGAGGTCGTTTGGAGATGCC
AACTCGCCAAATCGCCTCAATCCGAACAAACAGTTTCTGTACGACTCCATGCCAACTCGA
CGTGGGCCGCCATTTTCCGAGCGAGACATCGGCTTCTCACTGTCTGGTCCGCGGCAAAAT
GGCGACCGACTTTCGGCGGCAGTACCTCATATTTCCCCGATGCCAACAGACATGCCGTAC
AAGTGTGACATCTGCGACAAGTCATTCCAAAAACAAAGCTCCCTTACAAGACATAAATAT
GAACACACAGGCAAAAGACCCCACCATTGCAACGAATGCGGGAAGTCGTTTAAACACAAA
CATCATCTTATTGAACATCAGCGGCTTCATAGCGGGGAAAAGCCGTATCAGTGCGATAAA
TGCGGGAAGCGCTTTTCACATTCCGGCTCGTACTCCCAACATATGAACCATAGATATGCT
TATTGCAAGCCAGAAGATGCGATAATGCAAGAATTACGTCAGCAGATGAAAAAGAACGGT
GACGTCACATCACCAAGTCCAAACGTAGCCCCAAAGCAGAAAAAACGAAGGACTTCCCCA
CAATCTCCATACAACGCAGAGGCTCCCCAAACCGGGAATTCCCCATCGCGTAACCACTTG
CCTTCTTTCTTCGGTGGATTCTTCGGGAAAGACGCGATAGAGACTCCGCTAACAAAGGCT
TCTGTTTCCGACGAAACACCGGCTGCAATCTATGAAAAGTTGATGCTACAAGCACAAGAG
AAACTTCGCATATCCAGTATTTATTCAGGAAGTTCTTCACACGACCTAACCAGCGACCCT
AACAGTAGCGGAGATGAAAAATCTGTGAAACGAAGCAAGACTGAGTCCCCAGTCAAAAAA
GATTTTGAAGAGTCAGCGACACCAAGCGAGGACAATAACTCGATTAAACAGTCGCAAGGT
GGCGCGTCACCTTTTAATTCTACTTCACCTCGCAAATCAAGCGAAGACAAGAAAACAAAT
TTCATTTCTGCCTCTGACGTCACAATTTCACCTTCTACGTCACCATCACATTCTATTATG
TCGTCATCGCCGCAAGAAATGTCGATAATTGCGCCGGAAGACAGCCAAGTCACGCTGAAA
GGTTCTGCTTCATTTCTTCACATTCCAGTTGCCGCTGACCTTTCATGAAAGGTCATGATG
CATGGTCCCTACGTCATGGTTATGACGTTTTCACTTCATGCTTTATATTCGTGAATATTA
TTTGTTCTTAGTACGACGCCTTTGTTTTCTTCAACATTTCGTTTCTTCATCCCCTCGCGC
GCGCTGTACATATTGTTACGTCATAATTTTCGTGCTGCCTAATTTCTTCACTGTTCGCCT
ACGTCATCCGAATTGCGTCATCACTAATTACGTCACTGCGTTCATATTCTTCACTAATTC
CGGCTTGCCTTTTTTATTACGTCATACGCGCGTCAACCAAGTGCCTATTTGCGCAGGGGA
ACCCCCATTCTTGCATGACGTCACATATAATCGAGCACTGTTTCGTCACACTTGCCGTAC
GTTCACGCCGCTTCATGTATTGCATGGGATTTTCGGATTGTTTTTTTGCACCCCGTTTTT
GTTCACCTTGCGCAGATTTTGTTGCAGAACTTTTAGAGTTGCAATTTTTTTCCTTGCGGA
TCTCTCGATTAAGTTGCAATTATTACGATACGCAGATAATGCGAAAGATCATAGTACGTT
TCTTTGTTGATGCAATATTTTTTTTTGTATTTTGATGTCACACACAGCATTCCTGAACAA
TAAGAAACAAACAATCAAACGTCATAAAGGAACATTGTTAATCAAATTGACATTTTATAT
AAGTGTACCAACATTTGGAAAAAAGTGACATTTGGTGCTGCTTGCTGATAATATTGTGAC
AAATTTGTAAATACTGAAACTTGGGCCAAGATTTTACATTATTTCTATTGTACCAGATCA
TGCATATTTACCGCACAATAAAAAGAACTAACAGG
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[44-71] 10.076 - T[73-100] 17.267 - T[695-722] 15.708 - T[723-750] 17.225 - T[751-779] 11.24 |
| SMART |
Znf_C2H2_type (IPR013087) - T[44-66] 0.0049 - T[73-95] 0.012 - T[101-123] 180.0 - T[695-717] 5.1E-4 - T[723-745] 0.06 - T[751-772] 0.21 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[69-121] 1.77E-11 - T[685-732] 1.76E-12 - T[717-769] 2.11E-16 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[75-95] . - T[697-717] . - T[725-745] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZEB2_HUMAN | 85.714 % | 173 | 6.59E-44 |
| ZEB1_HUMAN | 84.884 % | 175 | 1.36E-44 |
| ZNF22_HUMAN | 48.913 % | 100 | 1.05E-23 |