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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.L149.21.v2...'
  2. Transcript 'Boleac.CG.SB_v3.S152...'
  3. Transcript 'KH2012:KH.C1.777.v2....'

Transcript Model

Transcript Id

KH2012:KH.C1.777.v2.A.nonSL3-1

Possible name(s)

ZEB1; ZEB2; ZNF22

Location

KhC1 [10,017,370 / 10,032,348]

Sequences

Amino acid sequence

Length: 1,010

>KH.C1.777.v2.A.nonSL3-1
FLNIFFAIFPPMFHSKITSQSESCYFGSFRWSRKKKVLKFFLREVCKVCGKAFINIYRLQ
RHMLTHNAGNRKFSCDTCGKAFKYKHHLKEHSRIHSGEKPYMCPNPRCMKRFSHSGSYSS
HVSSKKCINSSRMELSRHQNSSVTSPYGFVTSKREWNEGQPDESSLEKDGNNSIMMQLVE
NTSVIDNEETRKRDEGQRMEDDDWSVIEKESFTISKENEVQTSQQTFITSRGDFISDENA
SGTVKDNNNNPLDTPSYHNSGTESSGSSSSENLNSLKLLRHKIVTSNYPDVITSTAASSE
SNFGNWNDSLRGQDSFTARRIMKTSPISENNTQEPFGKQQQRHRLDQNILQELKGSADNV
TNKSYVMNNFLSSVQANGDRPWIPNLFDEKSLSPRHNTEPTSPPRSVTTSSHSYDVTKRY
RDAWSNSNSNNSNIAPYNFMLQQQIMQAALANAASGRVPMMQPSVLQQALAIVSANNWNM
EKTENRTEVPAMEKRRDSGNHANNPQNEPLDLSAKKRNERVSESGIPSSAVMTTPNTAVQ
AFQQMIRNNAMSSNAFTSLFPGGIPLSPQTLTSPAALSPPIPPEVLYAQQLQHYLSSGLY
PLDGANVLRNQMNQSAASNFSVKRGRPKKRSFGDANSPNRLNPNKQFLYDSMPTRRGPPF
SERDIGFSLSGPRQNGDRLSAAVPHISPMPTDMPYKCDICDKSFQKQSSLTRHKYEHTGK
RPHHCNECGKSFKHKHHLIEHQRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYAYCKPE
DAIMQELRQQMKKNGDVTSPSPNVAPKQKKRRTSPQSPYNAEAPQTGNSPSRNHLPSFFG
GFFGKDAIETPLTKASVSDETPAAIYEKLMLQAQEKLRISSIYSGSSSHDLTSDPNSSGD
EKSVKRSKTESPVKKDFEESATPSEDNNSIKQSQGGASPFNSTSPRKSSEDKKTNFISAS
DVTISPSTSPSHSIMSSSPQEMSIIAPEDSQVTLKGSASFLHIPVAADLS

Nucleotide sequence

Length: 4,175

>KH2012:KH.C1.777.v2.A.nonSL3-1
ATTCGCATGTAACAATCGCTGGTATCACATCATAATGCTTCAGTTTCACGCATGAATGGC
TTTTATCGCAGAAATCAGTCAAGCGTTTCATATTTCACCTGATCAGTATATTGTGACGTC
AGAAAGCAGATTATTTTCATTGCAGCAGTTTTTGAGTCGTCGTTTCATTTTTCGTGATCC
GCCAAACATAGATTCAATCACGTAACTTTCATTTTTCTCGTTTTTATTTTCTTTATTGCT
TTTCCTTTTTCATTTTCGCATAAAAATCGAACAAAAATATAAAATATAAAACCACTTCAA
AAAATTGCATGCTAGTTTTTAAATATTTTTTTCGCCATTTTCCCGCCAATGTTTCATTCG
AAAATAACCAGCCAATCAGAAAGCTGCTATTTTGGTTCTTTTCGTTGGAGCAGAAAAAAG
AAAGTTTTGAAGTTTTTTCTTCGAGAGGTTTGCAAAGTTTGCGGCAAAGCTTTCATCAAC
ATTTATCGCCTACAACGTCATATGCTGACGCACAATGCAGGAAATCGTAAGTTTAGTTGT
GACACGTGCGGCAAAGCTTTCAAATACAAACATCATCTGAAGGAACATAGTCGAATCCAT
AGCGGCGAAAAGCCGTACATGTGCCCGAATCCACGTTGCATGAAAAGGTTTTCGCATTCT
GGCTCATACAGCTCACATGTAAGCAGCAAGAAATGCATCAACTCATCAAGAATGGAATTA
TCACGTCATCAAAACTCGTCTGTGACGTCACCATATGGCTTTGTGACGTCGAAACGTGAA
TGGAATGAAGGACAACCGGACGAGTCCAGTTTGGAAAAGGATGGAAATAATAGCATAATG
ATGCAGCTTGTGGAAAACACGAGCGTTATCGATAATGAAGAAACGCGGAAGCGCGATGAA
GGTCAGAGAATGGAAGACGACGATTGGTCAGTGATTGAGAAAGAATCTTTCACGATTTCG
AAGGAAAACGAAGTTCAAACGTCACAACAAACGTTTATTACGTCACGAGGGGATTTTATC
TCGGACGAAAACGCGAGTGGAACCGTCAAGGACAACAACAACAATCCACTGGACACCCCG
TCATATCACAACTCTGGAACAGAAAGCTCAGGCTCATCGAGCTCCGAAAACTTGAATAGT
TTAAAACTGTTACGTCATAAAATTGTGACGTCAAATTACCCTGACGTCATTACATCGACC
GCGGCATCCAGCGAATCCAATTTTGGGAATTGGAACGACTCACTGCGGGGACAAGACTCT
TTTACCGCCCGCCGAATAATGAAAACCAGCCCAATCTCCGAAAACAACACCCAGGAACCG
TTTGGCAAGCAGCAGCAGCGACATCGTCTGGACCAAAATATTCTCCAAGAGCTGAAAGGA
TCGGCTGATAACGTCACAAACAAAAGTTACGTCATGAATAACTTTCTCAGCAGTGTACAA
GCAAATGGGGACCGACCTTGGATCCCGAACCTGTTTGACGAAAAGTCGCTCTCACCACGT
CACAATACCGAGCCTACGTCACCGCCAAGATCTGTTACTACGTCATCACATAGTTATGAC
GTCACAAAAAGATACCGTGACGCATGGAGCAACAGCAACAGCAATAACTCAAACATAGCT
CCGTACAACTTTATGCTGCAACAACAAATCATGCAAGCAGCGCTCGCTAACGCCGCAAGT
GGCAGAGTGCCAATGATGCAACCCAGTGTTCTACAACAGGCGCTCGCGATTGTATCGGCC
AACAATTGGAACATGGAAAAGACGGAAAACCGCACGGAAGTTCCGGCCATGGAAAAACGA
CGGGATTCAGGAAACCACGCCAACAATCCTCAAAACGAACCGTTGGATCTTTCAGCTAAG
AAAAGAAACGAACGAGTTTCGGAATCCGGTATCCCTTCTTCAGCTGTAATGACGACACCC
AACACTGCAGTTCAAGCATTTCAGCAGATGATCCGTAACAATGCAATGTCATCGAATGCG
TTCACGAGCCTCTTTCCCGGTGGAATCCCACTAAGTCCACAAACACTGACCAGCCCAGCC
GCCTTATCGCCGCCAATACCCCCCGAAGTATTGTACGCACAACAGCTACAGCATTATCTA
TCCTCTGGATTGTACCCGTTAGATGGCGCCAATGTTTTACGAAATCAAATGAACCAATCA
GCTGCAAGCAACTTCTCGGTCAAGCGAGGTCGGCCAAAGAAGAGGTCGTTTGGAGATGCC
AACTCGCCAAATCGCCTCAATCCGAACAAACAGTTTCTGTACGACTCCATGCCAACTCGA
CGTGGGCCGCCATTTTCCGAGCGAGACATCGGCTTCTCACTGTCTGGTCCGCGGCAAAAT
GGCGACCGACTTTCGGCGGCAGTACCTCATATTTCCCCGATGCCAACAGACATGCCGTAC
AAGTGTGACATCTGCGACAAGTCATTCCAAAAACAAAGCTCCCTTACAAGACATAAATAT
GAACACACAGGCAAAAGACCCCACCATTGCAACGAATGCGGGAAGTCGTTTAAACACAAA
CATCATCTTATTGAACATCAGCGGCTTCATAGCGGGGAAAAGCCGTATCAGTGCGATAAA
TGCGGGAAGCGCTTTTCACATTCCGGCTCGTACTCCCAACATATGAACCATAGATATGCT
TATTGCAAGCCAGAAGATGCGATAATGCAAGAATTACGTCAGCAGATGAAAAAGAACGGT
GACGTCACATCACCAAGTCCAAACGTAGCCCCAAAGCAGAAAAAACGAAGGACTTCCCCA
CAATCTCCATACAACGCAGAGGCTCCCCAAACCGGGAATTCCCCATCGCGTAACCACTTG
CCTTCTTTCTTCGGTGGATTCTTCGGGAAAGACGCGATAGAGACTCCGCTAACAAAGGCT
TCTGTTTCCGACGAAACACCGGCTGCAATCTATGAAAAGTTGATGCTACAAGCACAAGAG
AAACTTCGCATATCCAGTATTTATTCAGGAAGTTCTTCACACGACCTAACCAGCGACCCT
AACAGTAGCGGAGATGAAAAATCTGTGAAACGAAGCAAGACTGAGTCCCCAGTCAAAAAA
GATTTTGAAGAGTCAGCGACACCAAGCGAGGACAATAACTCGATTAAACAGTCGCAAGGT
GGCGCGTCACCTTTTAATTCTACTTCACCTCGCAAATCAAGCGAAGACAAGAAAACAAAT
TTCATTTCTGCCTCTGACGTCACAATTTCACCTTCTACGTCACCATCACATTCTATTATG
TCGTCATCGCCGCAAGAAATGTCGATAATTGCGCCGGAAGACAGCCAAGTCACGCTGAAA
GGTTCTGCTTCATTTCTTCACATTCCAGTTGCCGCTGACCTTTCATGAAAGGTCATGATG
CATGGTCCCTACGTCATGGTTATGACGTTTTCACTTCATGCTTTATATTCGTGAATATTA
TTTGTTCTTAGTACGACGCCTTTGTTTTCTTCAACATTTCGTTTCTTCATCCCCTCGCGC
GCGCTGTACATATTGTTACGTCATAATTTTCGTGCTGCCTAATTTCTTCACTGTTCGCCT
ACGTCATCCGAATTGCGTCATCACTAATTACGTCACTGCGTTCATATTCTTCACTAATTC
CGGCTTGCCTTTTTTATTACGTCATACGCGCGTCAACCAAGTGCCTATTTGCGCAGGGGA
ACCCCCATTCTTGCATGACGTCACATATAATCGAGCACTGTTTCGTCACACTTGCCGTAC
GTTCACGCCGCTTCATGTATTGCATGGGATTTTCGGATTGTTTTTTTGCACCCCGTTTTT
GTTCACCTTGCGCAGATTTTGTTGCAGAACTTTTAGAGTTGCAATTTTTTTCCTTGCGGA
TCTCTCGATTAAGTTGCAATTATTACGATACGCAGATAATGCGAAAGATCATAGTACGTT
TCTTTGTTGATGCAATATTTTTTTTTGTATTTTGATGTCACACACAGCATTCCTGAACAA
TAAGAAACAAACAATCAAACGTCATAAAGGAACATTGTTAATCAAATTGACATTTTATAT
AAGTGTACCAACATTTGGAAAAAAGTGACATTTGGTGCTGCTTGCTGATAATATTGTGAC
AAATTTGTAAATACTGAAACTTGGGCCAAGATTTTACATTATTTCTATTGTACCAGATCA
TGCATATTTACCGCACAATAAAAAGAACTAACAGG

InterProScan

ProSiteProfiles
Znf_C2H2_type (IPR013087) - T[44-71] 10.076 - T[73-100] 17.267 - T[695-722] 15.708 - T[723-750] 17.225 - T[751-779] 11.24
SMART
Znf_C2H2_type (IPR013087) - T[44-66] 0.0049 - T[73-95] 0.012 - T[101-123] 180.0 - T[695-717] 5.1E-4 - T[723-745] 0.06 - T[751-772] 0.21
SUPERFAMILY
Znf_C2H2_sf (IPR036236) - T[69-121] 1.77E-11 - T[685-732] 1.76E-12 - T[717-769] 2.11E-16
ProSitePatterns
Znf_C2H2_type (IPR013087) - T[75-95] . - T[697-717] . - T[725-745] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ZEB2_HUMAN 85.714 % 173 6.59E-44
ZEB1_HUMAN 84.884 % 175 1.36E-44
ZNF22_HUMAN 48.913 % 100 1.05E-23